CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82243229|82243504
Strand +
CircType exon
Host Gene ENSG00000141551.13;
Algorism CIRI2;
Sequence CAGAAGGCAGGTGGCCTCCGTGAGCTGGTGCTGCCCCAGGCTCCATGCTGCTGTGCCCTGAGGTTCCCAGGATGCCTTCTCGCCTCTCACTCCGCAGCACTTGGGCGGTAGCCAGTGGCCATGTGCTCCCAACCCCAATGCGCAGGGCAGTCTGTGTTCGTGGGCACTTCGGCTGGACCCCATCACGATGGACGATGTTCCCTTTGGACTCTAGGGCTTCGAAGGTGTGCACCTTGGTTCTCCCTTCTCCTCCCCAGAGTTCCCCGGATGCCATAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82243229|82243504 hsa-miR-15a-5p 0 0 1
chr17:82243229|82243504 hsa-miR-15a-3p 0 0 1
chr17:82243229|82243504 hsa-miR-18a-5p 0 0 1
chr17:82243229|82243504 hsa-miR-18a-3p 0 0 1
chr17:82243229|82243504 hsa-miR-29a-5p 0 0 1
chr17:82243229|82243504 hsa-miR-29a-3p 0 0 1
chr17:82243229|82243504 hsa-miR-107 0 0 1
chr17:82243229|82243504 hsa-miR-183-5p 0 0 1
chr17:82243229|82243504 hsa-miR-183-3p 0 0 1
chr17:82243229|82243504 hsa-miR-15b-5p 0 0 1
chr17:82243229|82243504 hsa-miR-15b-3p 0 0 1
chr17:82243229|82243504 hsa-miR-195-5p 0 0 1
chr17:82243229|82243504 hsa-miR-195-3p 0 0 1
chr17:82243229|82243504 hsa-miR-29c-5p 0 0 1
chr17:82243229|82243504 hsa-miR-29c-3p 0 0 1
chr17:82243229|82243504 hsa-miR-302a-5p 0 0 1
chr17:82243229|82243504 hsa-miR-302a-3p 0 0 1
chr17:82243229|82243504 hsa-miR-302b-5p 0 0 1
chr17:82243229|82243504 hsa-miR-302b-3p 0 0 1
chr17:82243229|82243504 hsa-miR-302c-5p 0 0 1
chr17:82243229|82243504 hsa-miR-302c-3p 0 0 1
chr17:82243229|82243504 hsa-miR-302d-5p 0 0 1
chr17:82243229|82243504 hsa-miR-302d-3p 0 0 1
chr17:82243229|82243504 hsa-miR-372-5p 0 0 1
chr17:82243229|82243504 hsa-miR-372-3p 0 0 1
chr17:82243229|82243504 hsa-miR-373-5p 0 0 1
chr17:82243229|82243504 hsa-miR-373-3p 0 0 1
chr17:82243229|82243504 hsa-miR-326 0 0 1
chr17:82243229|82243504 hsa-miR-424-5p 0 0 1
chr17:82243229|82243504 hsa-miR-424-3p 0 0 1
chr17:82243229|82243504 hsa-miR-18b-5p 0 0 1
chr17:82243229|82243504 hsa-miR-18b-3p 0 0 1
chr17:82243229|82243504 hsa-miR-497-5p 0 0 1
chr17:82243229|82243504 hsa-miR-497-3p 0 0 1
chr17:82243229|82243504 hsa-miR-520e-5p 0 0 1
chr17:82243229|82243504 hsa-miR-520e-3p 0 0 1
chr17:82243229|82243504 hsa-miR-520b-5p 0 0 1
chr17:82243229|82243504 hsa-miR-520b-3p 0 0 1
chr17:82243229|82243504 hsa-miR-588 0 0 1
chr17:82243229|82243504 hsa-miR-589-5p 0 0 1
chr17:82243229|82243504 hsa-miR-589-3p 0 0 1
chr17:82243229|82243504 hsa-miR-637 1 0 1
chr17:82243229|82243504 hsa-miR-661 0 0 1
chr17:82243229|82243504 hsa-miR-658 0 0 1
chr17:82243229|82243504 hsa-miR-765 1 0 1
chr17:82243229|82243504 hsa-miR-874-5p 0 0 1
chr17:82243229|82243504 hsa-miR-874-3p 0 0 1
chr17:82243229|82243504 hsa-miR-892b 0 0 1
chr17:82243229|82243504 hsa-miR-920 0 0 1
chr17:82243229|82243504 hsa-miR-939-5p 0 0 1
chr17:82243229|82243504 hsa-miR-939-3p 0 0 1
chr17:82243229|82243504 hsa-miR-1226-5p 0 0 1
chr17:82243229|82243504 hsa-miR-1226-3p 0 0 1
chr17:82243229|82243504 hsa-miR-1228-5p 0 0 1
chr17:82243229|82243504 hsa-miR-1228-3p 0 0 1
chr17:82243229|82243504 hsa-miR-1237-5p 0 0 1
chr17:82243229|82243504 hsa-miR-1237-3p 0 0 1
chr17:82243229|82243504 hsa-miR-1266-5p 0 0 1
chr17:82243229|82243504 hsa-miR-1266-3p 0 0 1
chr17:82243229|82243504 hsa-miR-302e 0 0 1
chr17:82243229|82243504 hsa-miR-1292-5p 0 0 1
chr17:82243229|82243504 hsa-miR-1292-3p 0 0 1
chr17:82243229|82243504 hsa-miR-512-3p 0 0 1
chr17:82243229|82243504 hsa-miR-486-3p 1 0 1
chr17:82243229|82243504 hsa-miR-615-5p 1 0 1
chr17:82243229|82243504 hsa-miR-146b-3p 0 0 1
chr17:82243229|82243504 hsa-miR-330-5p 0 0 1
chr17:82243229|82243504 hsa-miR-520d-3p 0 0 1
chr17:82243229|82243504 hsa-miR-520a-3p 0 0 1
chr17:82243229|82243504 hsa-miR-520c-3p 0 0 1
chr17:82243229|82243504 hsa-miR-103 0 0 1
chr17:82243229|82243504 hsa-miR-16 0 0 1
chr17:82243229|82243504 hsa-miR-29b 0 0 1
chr17:82243229|82243504 hsa-miR-198 1 0 0
chr17:82243229|82243504 hsa-miR-638 1 0 0
chr17:82243229|82243504 hsa-miR-762 1 0 0
chr17:82243229|82243504 hsa-miR-1913 1 0 0
chr17:82243229|82243504 hsa-miR-3196 1 0 0
chr17:82243229|82243504 hsa-miR-3197 1 0 0
chr17:82243229|82243504 hsa-miR-3937 1 0 0
chr17:82243229|82243504 hsa-miR-4688 1 0 0
chr17:82243229|82243504 hsa-miR-4706 1 0 0
chr17:82243229|82243504 hsa-miR-4739 1 0 0
chr17:82243229|82243504 hsa-miR-6081 1 0 0
chr17:82243229|82243504 hsa-miR-8072 1 0 0
chr17:82243229|82243504 hsa-miR-8089 1 0 0
chr17:82243229|82243504 hsa-miR-6734-5p 1 0 0
chr17:82243229|82243504 hsa-miR-3194-3p 1 0 0
chr17:82243229|82243504 hsa-miR-671-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6861-5p 1 0 0
chr17:82243229|82243504 hsa-miR-7106-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6825-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6894-5p 1 0 0
chr17:82243229|82243504 hsa-miR-125a-3p 1 0 0
chr17:82243229|82243504 hsa-miR-6089 1 0 0
chr17:82243229|82243504 hsa-miR-4695-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6746-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6727-5p 1 0 0
chr17:82243229|82243504 hsa-let-7i-3p 1 0 0
chr17:82243229|82243504 hsa-miR-1288-3p 1 0 0
chr17:82243229|82243504 hsa-miR-3180-3p 1 0 0
chr17:82243229|82243504 hsa-miR-6760-5p 1 0 0
chr17:82243229|82243504 hsa-miR-4793-3p 1 0 0
chr17:82243229|82243504 hsa-miR-6821-5p 1 0 0
chr17:82243229|82243504 hsa-miR-1343-3p 1 0 0
chr17:82243229|82243504 hsa-miR-7109-5p 1 0 0
chr17:82243229|82243504 hsa-miR-1229-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6784-5p 1 0 0
chr17:82243229|82243504 hsa-miR-149-3p 1 0 0
chr17:82243229|82243504 hsa-miR-6824-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6789-5p 1 0 0
chr17:82243229|82243504 hsa-miR-1910-5p 1 0 0
chr17:82243229|82243504 hsa-miR-1233-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6778-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6816-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6775-5p 1 0 0
chr17:82243229|82243504 hsa-miR-3180 1 0 0
chr17:82243229|82243504 hsa-miR-6737-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6803-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6819-5p 1 0 0
chr17:82243229|82243504 hsa-miR-1249-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6763-5p 1 0 0
chr17:82243229|82243504 hsa-miR-7111-5p 1 0 0
chr17:82243229|82243504 hsa-miR-4728-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6780b-5p 1 0 0
chr17:82243229|82243504 hsa-miR-328-5p 1 0 0
chr17:82243229|82243504 hsa-miR-4649-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6729-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6794-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6795-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6887-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6889-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6885-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6855-5p 1 0 0
chr17:82243229|82243504 hsa-miR-324-3p 1 0 0
chr17:82243229|82243504 hsa-miR-6750-5p 1 0 0
chr17:82243229|82243504 hsa-miR-6785-5p 1 0 0
chr17:82243229|82243504 hsa-miR-4667-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:82243229|82243504
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MVLPQAPCCCALRFPGCLLASHSAALGR
Nucleotide Sequence CTGGTGCTGCCCCAGGCTCCATGCTGCTGTGCCCTGAGGTTCCCAGGATGCCTTCTCGCCTCTCACTCCGCAGCACTTGGGCGGTAG
CircID chr17:82243229|82243504
ORF Type ORF2
Protein Length 51
Nucleotide Length 156
Protein Sequence MCSQPQCAGQSVFVGTSAGPHHDGRCSLWTLGLRRCAPWFSLLLPRVPRMP
Nucleotide Sequence ATGTGCTCCCAACCCCAATGCGCAGGGCAGTCTGTGTTCGTGGGCACTTCGGCTGGACCCCATCACGATGGACGATGTTCCCTTTGGACTCTAGGGCTTCGAAGGTGTGCACCTTGGTTCTCCCTTCTCCTCCCCAGAGTTCCCCGGATGCCATAA
CircID chr17:82243229|82243504
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MGGSQWPCAPNPNAQGSLCSWALRLDPITMDDVPFGL
Nucleotide Sequence TTGGGCGGTAGCCAGTGGCCATGTGCTCCCAACCCCAATGCGCAGGGCAGTCTGTGTTCGTGGGCACTTCGGCTGGACCCCATCACGATGGACGATGTTCCCTTTGGACTCTAG
CircID chr17:82243229|82243504
ORF Type ORF4
Protein Length 77
Nucleotide Length 231
Protein Sequence MLLCPEVPRMPSRLSLRSTWAVASGHVLPTPMRRAVCVRGHFGWTPSRWTMFPLDSRASKVCTLVLPSPPQSSPDAI
Nucleotide Sequence ATGCTGCTGTGCCCTGAGGTTCCCAGGATGCCTTCTCGCCTCTCACTCCGCAGCACTTGGGCGGTAGCCAGTGGCCATGTGCTCCCAACCCCAATGCGCAGGGCAGTCTGTGTTCGTGGGCACTTCGGCTGGACCCCATCACGATGGACGATGTTCCCTTTGGACTCTAGGGCTTCGAAGGTGTGCACCTTGGTTCTCCCTTCTCCTCCCCAGAGTTCCCCGGATGCCATA
CircID chr17:82243229|82243504
ORF Type ORF5
Protein Length 61
Nucleotide Length 183
Protein Sequence MGSSRSAHEHRLPCALGLGAHGHWLPPKCCGVRGEKASWEPQGTAAWSLGQHQLTEATCLL
Nucleotide Sequence ATGGGGTCCAGCCGAAGTGCCCACGAACACAGACTGCCCTGCGCATTGGGGTTGGGAGCACATGGCCACTGGCTACCGCCCAAGTGCTGCGGAGTGAGAGGCGAGAAGGCATCCTGGGAACCTCAGGGCACAGCAGCATGGAGCCTGGGGCAGCACCAGCTCACGGAGGCCACCTGCCTTCTG
CircID chr17:82243229|82243504
ORF Type ORF6
Protein Length 91
Nucleotide Length 273
Protein Sequence MASGELWGGEGRTKVHTFEALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSERREGILGTSGHSSMEPGAAPAHGGHLPS
Nucleotide Sequence ATGGCATCCGGGGAACTCTGGGGAGGAGAAGGGAGAACCAAGGTGCACACCTTCGAAGCCCTAGAGTCCAAAGGGAACATCGTCCATCGTGATGGGGTCCAGCCGAAGTGCCCACGAACACAGACTGCCCTGCGCATTGGGGTTGGGAGCACATGGCCACTGGCTACCGCCCAAGTGCTGCGGAGTGAGAGGCGAGAAGGCATCCTGGGAACCTCAGGGCACAGCAGCATGGAGCCTGGGGCAGCACCAGCTCACGGAGGCCACCTGCCTTCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab