CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82243954|82244242
Strand -
CircType exon
Host Gene ENSG00000141551.13;
Algorism CIRI2;
Sequence CTCCTGGGGAAGAAGCGCGCAGTGCTTTGCCTGGTAACACCCACTGCACCCCTGCCCCGCGGCAGCCTGCGGTCCCTAACTGCTCTCCGAGGGCCTCAAGAGTTCCTGACAGCAGGCATGTCAATTACGGGAGGAGGGAGGGTGAGACGCCAAAATCAGGTTGAAGAGGTCCCACCACACACGGGCACACACACACACCACGGACTTTTGATGAGAAATCTCCTCTCCAAAGCGGACAATAAAACACTGCAAAACAAACACAGCACACACCCTTGAGATCCACCTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82243954|82244242 hsa-miR-185-5p 0 0 1
chr17:82243954|82244242 hsa-miR-185-3p 0 0 1
chr17:82243954|82244242 hsa-miR-370-5p 0 0 1
chr17:82243954|82244242 hsa-miR-370-3p 0 0 1
chr17:82243954|82244242 hsa-miR-489-5p 0 0 1
chr17:82243954|82244242 hsa-miR-489-3p 0 0 1
chr17:82243954|82244242 hsa-miR-526b-5p 0 0 1
chr17:82243954|82244242 hsa-miR-526b-3p 0 0 1
chr17:82243954|82244242 hsa-miR-507 0 0 1
chr17:82243954|82244242 hsa-miR-557 0 0 1
chr17:82243954|82244242 hsa-miR-609 0 0 1
chr17:82243954|82244242 hsa-miR-620 0 0 1
chr17:82243954|82244242 hsa-miR-626 0 0 1
chr17:82243954|82244242 hsa-miR-657 0 0 1
chr17:82243954|82244242 hsa-miR-541-5p 0 0 1
chr17:82243954|82244242 hsa-miR-541-3p 0 0 1
chr17:82243954|82244242 hsa-miR-744-5p 0 0 1
chr17:82243954|82244242 hsa-miR-744-3p 0 0 1
chr17:82243954|82244242 hsa-miR-665 0 0 1
chr17:82243954|82244242 hsa-miR-873-5p 0 0 1
chr17:82243954|82244242 hsa-miR-873-3p 0 0 1
chr17:82243954|82244242 hsa-miR-1229-5p 0 0 1
chr17:82243954|82244242 hsa-miR-1229-3p 0 0 1
chr17:82243954|82244242 hsa-miR-1304-5p 0 0 1
chr17:82243954|82244242 hsa-miR-1304-3p 0 0 1
chr17:82243954|82244242 hsa-miR-1270 0 0 1
chr17:82243954|82244242 hsa-miR-513c-5p 0 0 1
chr17:82243954|82244242 hsa-miR-513c-3p 0 0 1
chr17:82243954|82244242 hsa-miR-486-3p 0 0 1
chr17:82243954|82244242 hsa-miR-654-5p 0 0 1
chr17:82243954|82244242 hsa-miR-330-3p 0 0 1
chr17:82243954|82244242 hsa-miR-1207-5p 1 0 1
chr17:82243954|82244242 hsa-miR-342-5p 0 0 1
chr17:82243954|82244242 hsa-miR-450b-5p 0 0 1
chr17:82243954|82244242 hsa-miR-644 0 0 1
chr17:82243954|82244242 hsa-miR-768-5p 0 0 1
chr17:82243954|82244242 hsa-miR-147 0 0 1
chr17:82243954|82244242 hsa-miR-449a 1 0 0
chr17:82243954|82244242 hsa-miR-637 1 0 0
chr17:82243954|82244242 hsa-miR-638 1 0 0
chr17:82243954|82244242 hsa-miR-663a 1 0 0
chr17:82243954|82244242 hsa-miR-762 1 0 0
chr17:82243954|82244242 hsa-miR-3181 1 0 0
chr17:82243954|82244242 hsa-miR-4259 1 0 0
chr17:82243954|82244242 hsa-miR-3650 1 0 0
chr17:82243954|82244242 hsa-miR-3665 1 0 0
chr17:82243954|82244242 hsa-miR-3936 1 0 0
chr17:82243954|82244242 hsa-miR-1268b 1 0 0
chr17:82243954|82244242 hsa-miR-4449 1 0 0
chr17:82243954|82244242 hsa-miR-4455 1 0 0
chr17:82243954|82244242 hsa-miR-4508 1 0 0
chr17:82243954|82244242 hsa-miR-4518 1 0 0
chr17:82243954|82244242 hsa-miR-4651 1 0 0
chr17:82243954|82244242 hsa-miR-4675 1 0 0
chr17:82243954|82244242 hsa-miR-4688 1 0 0
chr17:82243954|82244242 hsa-miR-4706 1 0 0
chr17:82243954|82244242 hsa-miR-4739 1 0 0
chr17:82243954|82244242 hsa-miR-4752 1 0 0
chr17:82243954|82244242 hsa-miR-5090 1 0 0
chr17:82243954|82244242 hsa-miR-5572 1 0 0
chr17:82243954|82244242 hsa-miR-5787 1 0 0
chr17:82243954|82244242 hsa-miR-6081 1 0 0
chr17:82243954|82244242 hsa-miR-6860 1 0 0
chr17:82243954|82244242 hsa-miR-8072 1 0 0
chr17:82243954|82244242 hsa-miR-12114 1 0 0
chr17:82243954|82244242 hsa-miR-6747-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6765-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6861-5p 1 0 0
chr17:82243954|82244242 hsa-miR-125a-3p 1 0 0
chr17:82243954|82244242 hsa-miR-8071 1 0 0
chr17:82243954|82244242 hsa-miR-6804-5p 1 0 0
chr17:82243954|82244242 hsa-miR-7114-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6515-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6089 1 0 0
chr17:82243954|82244242 hsa-miR-6880-5p 1 0 0
chr17:82243954|82244242 hsa-miR-4722-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6727-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6721-5p 1 0 0
chr17:82243954|82244242 hsa-miR-197-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6849-3p 1 0 0
chr17:82243954|82244242 hsa-miR-6742-5p 1 0 0
chr17:82243954|82244242 hsa-miR-3151-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6772-5p 1 0 0
chr17:82243954|82244242 hsa-miR-877-3p 1 0 0
chr17:82243954|82244242 hsa-miR-4697-3p 1 0 0
chr17:82243954|82244242 hsa-miR-6782-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6821-5p 1 0 0
chr17:82243954|82244242 hsa-miR-5008-5p 1 0 0
chr17:82243954|82244242 hsa-miR-4640-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6753-5p 1 0 0
chr17:82243954|82244242 hsa-miR-1228-5p 1 0 0
chr17:82243954|82244242 hsa-miR-92b-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6861-3p 1 0 0
chr17:82243954|82244242 hsa-miR-3648 1 0 0
chr17:82243954|82244242 hsa-miR-4787-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6824-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6789-5p 1 0 0
chr17:82243954|82244242 hsa-miR-574-5p 1 0 0
chr17:82243954|82244242 hsa-miR-7112-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6499-3p 1 0 0
chr17:82243954|82244242 hsa-miR-4762-3p 1 0 0
chr17:82243954|82244242 hsa-miR-6814-5p 1 0 0
chr17:82243954|82244242 hsa-miR-328-3p 1 0 0
chr17:82243954|82244242 hsa-miR-1296-3p 1 0 0
chr17:82243954|82244242 hsa-miR-4433a-5p 1 0 0
chr17:82243954|82244242 hsa-miR-4433b-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6759-3p 1 0 0
chr17:82243954|82244242 hsa-miR-19b-1-5p 1 0 0
chr17:82243954|82244242 hsa-miR-4763-3p 1 0 0
chr17:82243954|82244242 hsa-miR-6769b-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6787-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6816-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6775-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6743-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6752-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6756-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6803-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6842-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6851-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6722-3p 1 0 0
chr17:82243954|82244242 hsa-miR-6751-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6808-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6879-5p 1 0 0
chr17:82243954|82244242 hsa-miR-3127-3p 1 0 0
chr17:82243954|82244242 hsa-miR-1237-5p 1 0 0
chr17:82243954|82244242 hsa-miR-1909-3p 1 0 0
chr17:82243954|82244242 hsa-miR-328-5p 1 0 0
chr17:82243954|82244242 hsa-miR-4725-3p 1 0 0
chr17:82243954|82244242 hsa-miR-4749-5p 1 0 0
chr17:82243954|82244242 hsa-miR-4436b-3p 1 0 0
chr17:82243954|82244242 hsa-miR-4697-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6885-5p 1 0 0
chr17:82243954|82244242 hsa-miR-939-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6511b-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6856-5p 1 0 0
chr17:82243954|82244242 hsa-miR-3184-5p 1 0 0
chr17:82243954|82244242 hsa-miR-2682-3p 1 0 0
chr17:82243954|82244242 hsa-miR-6791-5p 1 0 0
chr17:82243954|82244242 hsa-miR-6511a-3p 1 0 0
chr17:82243954|82244242 hsa-miR-6862-3p 1 0 0
chr17:82243954|82244242 hsa-miR-6511b-3p 1 0 0
chr17:82243954|82244242 hsa-miR-6823-3p 1 0 0
chr17:82243954|82244242 hsa-miR-449b-5p 1 0 0
chr17:82243954|82244242 hsa-miR-363-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:82243954|82244242
ORF Type ORF1
Protein Length 90
Nucleotide Length 273
Protein Sequence MGKKRAVLCLVTPTAPLPRGSLRSLTALRGPQEFLTAGMSITGGGRVRRQNQVEEVPPHTGTHTHHGLLMRNLLSKADNKTLQNKHSTHP
Nucleotide Sequence CTGGGGAAGAAGCGCGCAGTGCTTTGCCTGGTAACACCCACTGCACCCCTGCCCCGCGGCAGCCTGCGGTCCCTAACTGCTCTCCGAGGGCCTCAAGAGTTCCTGACAGCAGGCATGTCAATTACGGGAGGAGGGAGGGTGAGACGCCAAAATCAGGTTGAAGAGGTCCCACCACACACGGGCACACACACACACCACGGACTTTTGATGAGAAATCTCCTCTCCAAAGCGGACAATAAAACACTGCAAAACAAACACAGCACACACCCTTGA

CircID chr17:82243954|82244242
ORF Type ORF2
Protein Length 45
Nucleotide Length 138
Protein Sequence MPGNTHCTPAPRQPAVPNCSPRASRVPDSRHVNYGRREGETPKSG
Nucleotide Sequence TTGCCTGGTAACACCCACTGCACCCCTGCCCCGCGGCAGCCTGCGGTCCCTAACTGCTCTCCGAGGGCCTCAAGAGTTCCTGACAGCAGGCATGTCAATTACGGGAGGAGGGAGGGTGAGACGCCAAAATCAGGTTGA

CircID chr17:82243954|82244242
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MTCLLSGTLEALGEQLGTAGCRGAGVQWVLPGKALRASSPG
Nucleotide Sequence TTGACATGCCTGCTGTCAGGAACTCTTGAGGCCCTCGGAGAGCAGTTAGGGACCGCAGGCTGCCGCGGGGCAGGGGTGCAGTGGGTGTTACCAGGCAAAGCACTGCGCGCTTCTTCCCCAGGA

CircID chr17:82243954|82244242
ORF Type ORF4
Protein Length 43
Nucleotide Length 132
Protein Sequence MQCFIVRFGEEISHQKSVVCVCARVWWDLFNLILASHPPSSRN
Nucleotide Sequence TTGCAGTGTTTTATTGTCCGCTTTGGAGAGGAGATTTCTCATCAAAAGTCCGTGGTGTGTGTGTGTGCCCGTGTGTGGTGGGACCTCTTCAACCTGATTTTGGCGTCTCACCCTCCCTCCTCCCGTAATTGA

CircID chr17:82243954|82244242
ORF Type ORF5
Protein Length 35
Nucleotide Length 108
Protein Sequence MCLFCSVLLSALERRFLIKSPWCVCVPVCGGTSST
Nucleotide Sequence CTGTGTTTGTTTTGCAGTGTTTTATTGTCCGCTTTGGAGAGGAGATTTCTCATCAAAAGTCCGTGGTGTGTGTGTGTGCCCGTGTGTGGTGGGACCTCTTCAACCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites