CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82436923|82437147
Strand -
CircType exon
Host Gene ENSG00000169660.14;
Algorism CIRI2;
Sequence CTCCCTCCCTGTTCCACCAGTGTTTTCCTAGTGAGCAGGTGAACCAGGGGCCACGTACACTCTGGAGTCTCCCCGACTGGGACCCGGGCCGGCCGCATACACTCTGGAGTCTCCTACACTGAGACCCGGGCCTGGCTGTCTCAGGCGGCTCCCATGTTGGCTCTGGGTACAGCCCCGGGAGGCGTGTCCAGGGCCGTGTTGGCCGCCTCCCCTGGAGCCACTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82436923|82437147 hsa-miR-141-5p 0 0 1
chr17:82436923|82437147 hsa-miR-141-3p 0 0 1
chr17:82436923|82437147 hsa-miR-200a-5p 0 0 1
chr17:82436923|82437147 hsa-miR-200a-3p 0 0 1
chr17:82436923|82437147 hsa-miR-570-5p 0 0 1
chr17:82436923|82437147 hsa-miR-570-3p 0 0 1
chr17:82436923|82437147 hsa-miR-920 0 0 1
chr17:82436923|82437147 hsa-miR-1178-5p 0 0 1
chr17:82436923|82437147 hsa-miR-1178-3p 0 0 1
chr17:82436923|82437147 hsa-miR-663b 0 0 1
chr17:82436923|82437147 hsa-miR-1204 0 1 1
chr17:82436923|82437147 hsa-miR-1291 0 0 1
chr17:82436923|82437147 hsa-miR-1281 0 0 1
chr17:82436923|82437147 hsa-miR-1321 0 0 1
chr17:82436923|82437147 hsa-miR-542-5p 0 0 1
chr17:82436923|82437147 hsa-miR-525-5p 0 1 1
chr17:82436923|82437147 hsa-miR-508-5p 0 1 1
chr17:82436923|82437147 hsa-miR-331-3p 0 0 1
chr17:82436923|82437147 hsa-miR-767-3p 0 0 1
chr17:82436923|82437147 hsa-miR-520a-5p 0 0 1
chr17:82436923|82437147 hsa-miR-661 1 1 0
chr17:82436923|82437147 hsa-miR-1183 1 0 0
chr17:82436923|82437147 hsa-miR-1203 0 1 0
chr17:82436923|82437147 hsa-miR-1538 1 1 0
chr17:82436923|82437147 hsa-miR-2110 1 0 0
chr17:82436923|82437147 hsa-miR-3175 1 1 0
chr17:82436923|82437147 hsa-miR-3196 1 0 0
chr17:82436923|82437147 hsa-miR-4281 1 0 0
chr17:82436923|82437147 hsa-miR-4329 0 1 0
chr17:82436923|82437147 hsa-miR-4479 1 0 0
chr17:82436923|82437147 hsa-miR-4508 0 1 0
chr17:82436923|82437147 hsa-miR-4675 0 1 0
chr17:82436923|82437147 hsa-miR-4689 1 0 0
chr17:82436923|82437147 hsa-miR-4706 1 0 0
chr17:82436923|82437147 hsa-miR-4718 0 1 0
chr17:82436923|82437147 hsa-miR-4741 0 1 0
chr17:82436923|82437147 hsa-miR-5091 0 1 0
chr17:82436923|82437147 hsa-miR-5698 1 0 0
chr17:82436923|82437147 hsa-miR-6078 0 1 0
chr17:82436923|82437147 hsa-miR-6124 1 0 0
chr17:82436923|82437147 hsa-miR-9899 1 0 0
chr17:82436923|82437147 hsa-miR-4747-3p 0 1 0
chr17:82436923|82437147 hsa-miR-3150a-3p 1 0 0
chr17:82436923|82437147 hsa-miR-6825-5p 1 0 0
chr17:82436923|82437147 hsa-miR-210-5p 0 1 0
chr17:82436923|82437147 hsa-miR-8071 1 0 0
chr17:82436923|82437147 hsa-miR-6089 1 0 0
chr17:82436923|82437147 hsa-miR-7108-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6798-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6749-5p 1 0 0
chr17:82436923|82437147 hsa-miR-4743-5p 1 0 0
chr17:82436923|82437147 hsa-miR-4787-5p 1 0 0
chr17:82436923|82437147 hsa-miR-4638-3p 0 1 0
chr17:82436923|82437147 hsa-miR-6824-5p 1 0 0
chr17:82436923|82437147 hsa-miR-574-5p 0 1 0
chr17:82436923|82437147 hsa-miR-3177-3p 0 1 0
chr17:82436923|82437147 hsa-miR-10400-5p 1 0 0
chr17:82436923|82437147 hsa-miR-1233-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6778-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6870-5p 1 0 0
chr17:82436923|82437147 hsa-miR-1343-5p 1 0 0
chr17:82436923|82437147 hsa-miR-5001-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6726-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6752-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6763-5p 1 0 0
chr17:82436923|82437147 hsa-miR-4745-3p 0 1 0
chr17:82436923|82437147 hsa-miR-6777-5p 1 1 0
chr17:82436923|82437147 hsa-miR-6794-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6795-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6887-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6889-5p 1 1 0
chr17:82436923|82437147 hsa-miR-939-5p 1 0 0
chr17:82436923|82437147 hsa-miR-4758-5p 0 1 0
chr17:82436923|82437147 hsa-miR-6731-5p 1 0 0
chr17:82436923|82437147 hsa-miR-4665-5p 1 0 0
chr17:82436923|82437147 hsa-miR-10398-3p 0 1 0
chr17:82436923|82437147 hsa-miR-4646-5p 1 0 0
chr17:82436923|82437147 hsa-miR-6837-5p 0 1 0
chr17:82436923|82437147 hsa-miR-4756-5p 1 0 0
chr17:82436923|82437147 hsa-miR-412-3p 0 1 0
chr17:82436923|82437147 hsa-miR-1912-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:82436923|82437147
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MSQAAPMLALGTAPGGVSRAVLAASPGATH
Nucleotide Sequence CTGTCTCAGGCGGCTCCCATGTTGGCTCTGGGTACAGCCCCGGGAGGCGTGTCCAGGGCCGTGTTGGCCGCCTCCCCTGGAGCCACTCAC
CircID chr17:82436923|82437147
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence MESPRLGPGPAAYTLESPTLRPGPGCLRRLPCWLWVQPREACPGPCWPPPLEPL
Nucleotide Sequence CTGGAGTCTCCCCGACTGGGACCCGGGCCGGCCGCATACACTCTGGAGTCTCCTACACTGAGACCCGGGCCTGGCTGTCTCAGGCGGCTCCCATGTTGGCTCTGGGTACAGCCCCGGGAGGCGTGTCCAGGGCCGTGTTGGCCGCCTCCCCTGGAGCCACTC
CircID chr17:82436923|82437147
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MFHQCFPSEQVNQGPRTLWSLPDWDPGRPHTLWSLLH
Nucleotide Sequence CTGTTCCACCAGTGTTTTCCTAGTGAGCAGGTGAACCAGGGGCCACGTACACTCTGGAGTCTCCCCGACTGGGACCCGGGCCGGCCGCATACACTCTGGAGTCTCCTACACTGA
CircID chr17:82436923|82437147
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MAVSGGSHVGSGYSPGRRVQGRVGRLPWSHS
Nucleotide Sequence CTGGCTGTCTCAGGCGGCTCCCATGTTGGCTCTGGGTACAGCCCCGGGAGGCGTGTCCAGGGCCGTGTTGGCCGCCTCCCCTGGAGCCACTCA
CircID chr17:82436923|82437147
ORF Type ORF5
Protein Length 38
Nucleotide Length 117
Protein Sequence MRQPGPGLSVGDSRVYAAGPGPSRGDSRVYVAPGSPAH
Nucleotide Sequence CTGAGACAGCCAGGCCCGGGTCTCAGTGTAGGAGACTCCAGAGTGTATGCGGCCGGCCCGGGTCCCAGTCGGGGAGACTCCAGAGTGTACGTGGCCCCTGGTTCACCTGCTCACTAG
CircID chr17:82436923|82437147
ORF Type ORF6
Protein Length 32
Nucleotide Length 96
Protein Sequence MRPARVPVGETPECTWPLVHLLTRKTLVEQGG
Nucleotide Sequence ATGCGGCCGGCCCGGGTCCCAGTCGGGGAGACTCCAGAGTGTACGTGGCCCCTGGTTCACCTGCTCACTAGGAAAACACTGGTGGAACAGGGAGGG
CircID chr17:82436923|82437147
ORF Type ORF7
Protein Length 57
Nucleotide Length 171
Protein Sequence MYPEPTWEPPETARPGSQCRRLQSVCGRPGSQSGRLQSVRGPWFTCSLGKHWWNREG
Nucleotide Sequence CTGTACCCAGAGCCAACATGGGAGCCGCCTGAGACAGCCAGGCCCGGGTCTCAGTGTAGGAGACTCCAGAGTGTATGCGGCCGGCCCGGGTCCCAGTCGGGGAGACTCCAGAGTGTACGTGGCCCCTGGTTCACCTGCTCACTAGGAAAACACTGGTGGAACAGGGAGGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab