CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82718266|82718415
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCCTGCCCAGCACTGGAAACCACCTCATCTTGAGATGCCGTTTCCATCCAACTCCCCGGGACCACAGCAACTCCTCCCTTGGGTCCCCCTGGCTCACCACACAGCAGTGATCCCTAGAGTAGAAGTCAGAGCCAGCGGCCTTTCCTTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82718266|82718415 hsa-miR-149-5p 0 0 1
chr17:82718266|82718415 hsa-miR-149-3p 0 0 1
chr17:82718266|82718415 hsa-miR-345-5p 0 0 1
chr17:82718266|82718415 hsa-miR-345-3p 0 0 1
chr17:82718266|82718415 hsa-miR-571 0 0 1
chr17:82718266|82718415 hsa-miR-612 0 1 1
chr17:82718266|82718415 hsa-miR-617 0 0 1
chr17:82718266|82718415 hsa-miR-765 0 0 1
chr17:82718266|82718415 hsa-miR-760 0 0 1
chr17:82718266|82718415 hsa-miR-513c-5p 0 0 1
chr17:82718266|82718415 hsa-miR-513c-3p 0 0 1
chr17:82718266|82718415 hsa-miR-1321 0 0 1
chr17:82718266|82718415 hsa-miR-1825 0 0 1
chr17:82718266|82718415 hsa-miR-145-5p 0 0 1
chr17:82718266|82718415 hsa-miR-512-3p 0 0 1
chr17:82718266|82718415 hsa-miR-199a-5p 0 0 1
chr17:82718266|82718415 hsa-miR-876-3p 0 0 1
chr17:82718266|82718415 hsa-miR-199b-5p 0 0 1
chr17:82718266|82718415 hsa-miR-644 0 0 1
chr17:82718266|82718415 hsa-miR-1285 0 0 1
chr17:82718266|82718415 hsa-miR-147 0 0 1
chr17:82718266|82718415 hsa-miR-638 1 1 0
chr17:82718266|82718415 hsa-miR-1183 1 0 0
chr17:82718266|82718415 hsa-miR-711 1 1 0
chr17:82718266|82718415 hsa-miR-4281 1 1 0
chr17:82718266|82718415 hsa-miR-3911 1 0 0
chr17:82718266|82718415 hsa-miR-3916 0 1 0
chr17:82718266|82718415 hsa-miR-4449 0 1 0
chr17:82718266|82718415 hsa-miR-4739 1 1 0
chr17:82718266|82718415 hsa-miR-4784 1 0 0
chr17:82718266|82718415 hsa-miR-5093 1 0 0
chr17:82718266|82718415 hsa-miR-5698 1 0 0
chr17:82718266|82718415 hsa-miR-6133 1 0 0
chr17:82718266|82718415 hsa-miR-6860 0 1 0
chr17:82718266|82718415 hsa-miR-8089 1 0 0
chr17:82718266|82718415 hsa-miR-6765-5p 1 0 0
chr17:82718266|82718415 hsa-miR-7106-5p 1 1 0
chr17:82718266|82718415 hsa-miR-29b-2-5p 0 1 0
chr17:82718266|82718415 hsa-miR-766-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6807-5p 0 1 0
chr17:82718266|82718415 hsa-miR-6827-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6798-5p 1 1 0
chr17:82718266|82718415 hsa-miR-4640-5p 1 0 0
chr17:82718266|82718415 hsa-miR-5580-5p 0 1 0
chr17:82718266|82718415 hsa-miR-296-3p 1 0 0
chr17:82718266|82718415 hsa-miR-3648 1 0 0
chr17:82718266|82718415 hsa-miR-6877-5p 1 0 0
chr17:82718266|82718415 hsa-miR-1225-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6814-5p 1 1 0
chr17:82718266|82718415 hsa-miR-3144-5p 0 1 0
chr17:82718266|82718415 hsa-miR-4763-3p 1 0 0
chr17:82718266|82718415 hsa-miR-6812-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6870-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6763-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6875-5p 1 0 0
chr17:82718266|82718415 hsa-miR-3620-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6836-5p 1 0 0
chr17:82718266|82718415 hsa-miR-328-5p 1 0 0
chr17:82718266|82718415 hsa-miR-4726-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6777-5p 0 1 0
chr17:82718266|82718415 hsa-miR-6794-5p 1 1 0
chr17:82718266|82718415 hsa-miR-6795-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6883-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6887-5p 1 1 0
chr17:82718266|82718415 hsa-miR-6889-5p 1 1 0
chr17:82718266|82718415 hsa-miR-939-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6856-5p 1 0 0
chr17:82718266|82718415 hsa-miR-6750-5p 1 0 0
chr17:82718266|82718415 hsa-miR-3059-3p 0 1 0
chr17:82718266|82718415 hsa-miR-514b-5p 0 1 0
chr17:82718266|82718415 hsa-miR-520e-5p 0 1 0
chr17:82718266|82718415 hsa-miR-6505-3p 0 1 0
chr17:82718266|82718415 hsa-miR-301a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:82718266|82718415
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MPSTGNHLILRCRFHPTPRDHSNSSLGSPWLTTQQ
Nucleotide Sequence CTGCCCAGCACTGGAAACCACCTCATCTTGAGATGCCGTTTCCATCCAACTCCCCGGGACCACAGCAACTCCTCCCTTGGGTCCCCCTGGCTCACCACACAGCAGTGA
CircID chr17:82718266|82718415
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MPFPSNSPGPQQLLPWVPLAHHTAVIPRVEVRASGLSF
Nucleotide Sequence ATGCCGTTTCCATCCAACTCCCCGGGACCACAGCAACTCCTCCCTTGGGTCCCCCTGGCTCACCACACAGCAGTGATCCCTAGAGTAGAAGTCAGAGCCAGCGGCCTTTCCTTT
CircID chr17:82718266|82718415
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MLCGEPGGPKGGVAVVPGSWMETASQDEVVSSAGQE
Nucleotide Sequence CTGCTGTGTGGTGAGCCAGGGGGACCCAAGGGAGGAGTTGCTGTGGTCCCGGGGAGTTGGATGGAAACGGCATCTCAAGATGAGGTGGTTTCCAGTGCTGGGCAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab