CircRNA Information

General Information
circRNA Basic Information
CircID chr17:8318205|8318412
Strand +
CircType exon
Host Gene ENSG00000198844.9;
Algorism CIRI2;
Sequence CCCTCTTCTGTCTGGCGCAGGATATTCTGGGGACAAGGAGGAAGGGTGACTGGGCCCCCTGCTCTGTGGCCCTGGGATTCAGAGGGGCCACAGCTCAGAGGACCCTGTCTGTTTCAGCCAGTTTCAACAAGGCTGACAGACCTCATCACTCACCATCTGCAGAACCCTGAGCAAGTCCTGTTACCTCTCTGAGCCTCAGCTTCCCTAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:8318205|8318412 hsa-miR-494-5p 0 0 1
chr17:8318205|8318412 hsa-miR-494-3p 0 0 1
chr17:8318205|8318412 hsa-miR-558 0 0 1
chr17:8318205|8318412 hsa-miR-653-5p 0 0 1
chr17:8318205|8318412 hsa-miR-653-3p 0 0 1
chr17:8318205|8318412 hsa-miR-892b 0 0 1
chr17:8318205|8318412 hsa-miR-1178-5p 0 0 1
chr17:8318205|8318412 hsa-miR-1178-3p 0 0 1
chr17:8318205|8318412 hsa-miR-663b 0 0 1
chr17:8318205|8318412 hsa-miR-1205 0 0 1
chr17:8318205|8318412 hsa-miR-1266-5p 0 0 1
chr17:8318205|8318412 hsa-miR-1266-3p 0 0 1
chr17:8318205|8318412 hsa-miR-1324 0 1 1
chr17:8318205|8318412 hsa-miR-485-5p 0 0 1
chr17:8318205|8318412 hsa-miR-1184 0 0 1
chr17:8318205|8318412 hsa-miR-544 0 0 1
chr17:8318205|8318412 hsa-miR-24 0 0 1
chr17:8318205|8318412 hsa-miR-194 0 0 1
chr17:8318205|8318412 hsa-miR-198 1 0 0
chr17:8318205|8318412 hsa-miR-650 1 0 0
chr17:8318205|8318412 hsa-miR-658 1 0 0
chr17:8318205|8318412 hsa-miR-920 1 0 0
chr17:8318205|8318412 hsa-miR-1303 1 0 0
chr17:8318205|8318412 hsa-miR-1539 0 1 0
chr17:8318205|8318412 hsa-miR-2278 0 1 0
chr17:8318205|8318412 hsa-miR-3188 1 0 0
chr17:8318205|8318412 hsa-miR-3197 1 0 0
chr17:8318205|8318412 hsa-miR-4303 0 1 0
chr17:8318205|8318412 hsa-miR-4326 0 1 0
chr17:8318205|8318412 hsa-miR-4271 1 0 0
chr17:8318205|8318412 hsa-miR-3918 0 1 0
chr17:8318205|8318412 hsa-miR-3921 0 1 0
chr17:8318205|8318412 hsa-miR-4437 1 0 0
chr17:8318205|8318412 hsa-miR-4449 1 0 0
chr17:8318205|8318412 hsa-miR-3135b 1 0 0
chr17:8318205|8318412 hsa-miR-4518 1 1 0
chr17:8318205|8318412 hsa-miR-4647 1 1 0
chr17:8318205|8318412 hsa-miR-4656 1 0 0
chr17:8318205|8318412 hsa-miR-4663 1 0 0
chr17:8318205|8318412 hsa-miR-4739 1 0 0
chr17:8318205|8318412 hsa-miR-5087 0 1 0
chr17:8318205|8318412 hsa-miR-8075 1 0 0
chr17:8318205|8318412 hsa-miR-8077 1 0 0
chr17:8318205|8318412 hsa-miR-8083 0 1 0
chr17:8318205|8318412 hsa-miR-9986 0 1 0
chr17:8318205|8318412 hsa-miR-12115 1 0 0
chr17:8318205|8318412 hsa-miR-12127 1 0 0
chr17:8318205|8318412 hsa-miR-127-5p 1 0 0
chr17:8318205|8318412 hsa-miR-146a-3p 0 1 0
chr17:8318205|8318412 hsa-miR-4700-3p 0 1 0
chr17:8318205|8318412 hsa-miR-6879-3p 1 1 0
chr17:8318205|8318412 hsa-miR-6765-5p 1 0 0
chr17:8318205|8318412 hsa-miR-671-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6825-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6799-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6510-5p 1 0 0
chr17:8318205|8318412 hsa-miR-3622a-5p 1 0 0
chr17:8318205|8318412 hsa-miR-7160-5p 1 1 0
chr17:8318205|8318412 hsa-miR-24-3p 1 1 0
chr17:8318205|8318412 hsa-miR-2467-5p 1 0 0
chr17:8318205|8318412 hsa-miR-23a-5p 1 0 0
chr17:8318205|8318412 hsa-miR-486-3p 1 0 0
chr17:8318205|8318412 hsa-miR-2467-3p 1 0 0
chr17:8318205|8318412 hsa-miR-3934-3p 1 1 0
chr17:8318205|8318412 hsa-miR-5088-5p 1 0 0
chr17:8318205|8318412 hsa-miR-4793-5p 1 1 0
chr17:8318205|8318412 hsa-miR-6784-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6753-5p 0 1 0
chr17:8318205|8318412 hsa-let-7d-5p 0 1 0
chr17:8318205|8318412 hsa-miR-6771-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6823-5p 0 1 0
chr17:8318205|8318412 hsa-miR-7854-3p 1 0 0
chr17:8318205|8318412 hsa-miR-6824-5p 1 1 0
chr17:8318205|8318412 hsa-miR-6789-5p 1 0 0
chr17:8318205|8318412 hsa-miR-3162-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6800-5p 1 0 0
chr17:8318205|8318412 hsa-let-7g-5p 0 1 0
chr17:8318205|8318412 hsa-miR-6895-5p 0 1 0
chr17:8318205|8318412 hsa-miR-664b-5p 1 0 0
chr17:8318205|8318412 hsa-miR-1236-3p 0 1 0
chr17:8318205|8318412 hsa-let-7a-5p 0 1 0
chr17:8318205|8318412 hsa-miR-3158-3p 1 0 0
chr17:8318205|8318412 hsa-miR-1304-5p 1 1 0
chr17:8318205|8318412 hsa-miR-6801-5p 1 0 0
chr17:8318205|8318412 hsa-miR-5088-3p 0 1 0
chr17:8318205|8318412 hsa-miR-6501-3p 0 1 0
chr17:8318205|8318412 hsa-miR-4283 1 0 0
chr17:8318205|8318412 hsa-miR-19b-1-5p 1 0 0
chr17:8318205|8318412 hsa-miR-4524b-3p 0 1 0
chr17:8318205|8318412 hsa-miR-1343-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6726-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6754-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6722-3p 0 1 0
chr17:8318205|8318412 hsa-miR-6797-5p 1 0 0
chr17:8318205|8318412 hsa-miR-1915-3p 0 1 0
chr17:8318205|8318412 hsa-miR-5196-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6780b-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6836-5p 0 1 0
chr17:8318205|8318412 hsa-miR-1909-3p 1 1 0
chr17:8318205|8318412 hsa-miR-4632-5p 1 0 0
chr17:8318205|8318412 hsa-miR-4685-5p 1 1 0
chr17:8318205|8318412 hsa-miR-6735-5p 0 1 0
chr17:8318205|8318412 hsa-miR-6738-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6883-5p 1 0 0
chr17:8318205|8318412 hsa-miR-939-5p 1 1 0
chr17:8318205|8318412 hsa-miR-365a-5p 1 0 0
chr17:8318205|8318412 hsa-miR-365b-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6758-5p 1 1 0
chr17:8318205|8318412 hsa-miR-6856-5p 1 1 0
chr17:8318205|8318412 hsa-miR-4747-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6750-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6753-3p 0 1 0
chr17:8318205|8318412 hsa-miR-6762-5p 0 1 0
chr17:8318205|8318412 hsa-miR-6822-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6756-3p 0 1 0
chr17:8318205|8318412 hsa-miR-320a-3p 0 1 0
chr17:8318205|8318412 hsa-miR-320b 0 1 0
chr17:8318205|8318412 hsa-miR-6837-5p 0 1 0
chr17:8318205|8318412 hsa-miR-3059-5p 0 1 0
chr17:8318205|8318412 hsa-miR-4756-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6884-5p 1 0 0
chr17:8318205|8318412 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:8318205|8318412
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MWPWDSEGPQLRGPCLFQPVSTRLTDLITHHLQNPEQVLLPL
Nucleotide Sequence CTGTGGCCCTGGGATTCAGAGGGGCCACAGCTCAGAGGACCCTGTCTGTTTCAGCCAGTTTCAACAAGGCTGACAGACCTCATCACTCACCATCTGCAGAACCCTGAGCAAGTCCTGTTACCTCTCTGA
CircID chr17:8318205|8318412
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MGPLLCGPGIQRGHSSEDPVCFSQFQQG
Nucleotide Sequence CTGGGCCCCCTGCTCTGTGGCCCTGGGATTCAGAGGGGCCACAGCTCAGAGGACCCTGTCTGTTTCAGCCAGTTTCAACAAGGCTGA
CircID chr17:8318205|8318412
ORF Type ORF3
Protein Length 52
Nucleotide Length 159
Protein Sequence MAQDILGTRRKGDWAPCSVALGFRGATAQRTLSVSASFNKADRPHHSPSAEP
Nucleotide Sequence CTGGCGCAGGATATTCTGGGGACAAGGAGGAAGGGTGACTGGGCCCCCTGCTCTGTGGCCCTGGGATTCAGAGGGGCCACAGCTCAGAGGACCCTGTCTGTTTCAGCCAGTTTCAACAAGGCTGACAGACCTCATCACTCACCATCTGCAGAACCCTGA
CircID chr17:8318205|8318412
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MNPRATEQGAQSPFLLVPRISCARQKR
Nucleotide Sequence CTGAATCCCAGGGCCACAGAGCAGGGGGCCCAGTCACCCTTCCTCCTTGTCCCCAGAATATCCTGCGCCAGACAGAAGAGG
CircID chr17:8318205|8318412
ORF Type ORF5
Protein Length 32
Nucleotide Length 96
Protein Sequence MSCGPSESQGHRAGGPVTLPPCPQNILRQTEE
Nucleotide Sequence CTGAGCTGTGGCCCCTCTGAATCCCAGGGCCACAGAGCAGGGGGCCCAGTCACCCTTCCTCCTTGTCCCCAGAATATCCTGCGCCAGACAGAAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab