CircRNA Information

General Information
circRNA Basic Information
CircID chr17:8499270|8499380
Strand -
CircType exon
Host Gene ENSG00000133026.11;
Algorism CIRI2;
Sequence CTGCAGCTTACTTGCTTTCTCCGCCAGCTCCACCCTGAGCCTGTCGCCTTCAGAGACCTTGGCATGGAGCTCCTGGACCTGCGCGTCGAGCTTCTTCCTCTTGTGCTCAGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:8499270|8499380 hsa-miR-484 0 1 1
chr17:8499270|8499380 hsa-miR-593-5p 0 0 1
chr17:8499270|8499380 hsa-miR-593-3p 0 0 1
chr17:8499270|8499380 hsa-miR-708-5p 0 0 1
chr17:8499270|8499380 hsa-miR-708-3p 0 0 1
chr17:8499270|8499380 hsa-miR-665 0 0 1
chr17:8499270|8499380 hsa-miR-1266-5p 0 0 1
chr17:8499270|8499380 hsa-miR-1266-3p 0 0 1
chr17:8499270|8499380 hsa-miR-28-5p 0 1 1
chr17:8499270|8499380 hsa-miR-1273 0 0 1
chr17:8499270|8499380 hsa-miR-24 0 0 1
chr17:8499270|8499380 hsa-miR-612 1 0 0
chr17:8499270|8499380 hsa-miR-661 1 0 0
chr17:8499270|8499380 hsa-miR-658 1 1 0
chr17:8499270|8499380 hsa-miR-3139 0 1 0
chr17:8499270|8499380 hsa-miR-3153 0 1 0
chr17:8499270|8499380 hsa-miR-3155a 0 1 0
chr17:8499270|8499380 hsa-miR-4303 0 1 0
chr17:8499270|8499380 hsa-miR-3916 0 1 0
chr17:8499270|8499380 hsa-miR-3939 0 1 0
chr17:8499270|8499380 hsa-miR-3155b 0 1 0
chr17:8499270|8499380 hsa-miR-4487 0 1 0
chr17:8499270|8499380 hsa-miR-4498 1 1 0
chr17:8499270|8499380 hsa-miR-4518 0 1 0
chr17:8499270|8499380 hsa-miR-4706 1 0 0
chr17:8499270|8499380 hsa-miR-4739 1 0 0
chr17:8499270|8499380 hsa-miR-6125 1 0 0
chr17:8499270|8499380 hsa-miR-8055 0 1 0
chr17:8499270|8499380 hsa-miR-8089 1 0 0
chr17:8499270|8499380 hsa-miR-9900 0 1 0
chr17:8499270|8499380 hsa-miR-12115 1 1 0
chr17:8499270|8499380 hsa-miR-25-5p 0 1 0
chr17:8499270|8499380 hsa-miR-3663-3p 1 0 0
chr17:8499270|8499380 hsa-miR-6880-5p 1 1 0
chr17:8499270|8499380 hsa-miR-4722-5p 0 1 0
chr17:8499270|8499380 hsa-miR-3180-3p 1 0 0
chr17:8499270|8499380 hsa-miR-6760-5p 0 1 0
chr17:8499270|8499380 hsa-miR-6874-5p 0 1 0
chr17:8499270|8499380 hsa-miR-5006-5p 1 0 0
chr17:8499270|8499380 hsa-miR-3934-3p 0 1 0
chr17:8499270|8499380 hsa-miR-6786-5p 1 0 0
chr17:8499270|8499380 hsa-miR-5088-5p 1 0 0
chr17:8499270|8499380 hsa-miR-1226-5p 1 1 0
chr17:8499270|8499380 hsa-miR-6800-5p 1 0 0
chr17:8499270|8499380 hsa-miR-6878-5p 1 1 0
chr17:8499270|8499380 hsa-miR-99a-3p 0 1 0
chr17:8499270|8499380 hsa-miR-6787-5p 1 0 0
chr17:8499270|8499380 hsa-miR-3180 1 0 0
chr17:8499270|8499380 hsa-miR-6756-5p 1 1 0
chr17:8499270|8499380 hsa-miR-5189-5p 1 1 0
chr17:8499270|8499380 hsa-miR-939-5p 1 0 0
chr17:8499270|8499380 hsa-miR-1199-5p 1 0 0
chr17:8499270|8499380 hsa-miR-6859-5p 0 1 0
chr17:8499270|8499380 hsa-miR-99b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:8499270|8499380
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence LQLTCFLRQLHPEPVAFRDLGMELLDLRVELLPLVLR
Nucleotide Sequence CTGCAGCTTACTTGCTTTCTCCGCCAGCTCCACCCTGAGCCTGTCGCCTTCAGAGACCTTGGCATGGAGCTCCTGGACCTGCGCGTCGAGCTTCTTCCTCTTGTGCTCAGA

CircID chr17:8499270|8499380
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MSLSPSETLAWSSWTCASSFFLLCS
Nucleotide Sequence CTGAGCCTGTCGCCTTCAGAGACCTTGGCATGGAGCTCCTGGACCTGCGCGTCGAGCTTCTTCCTCTTGTGCTCA

CircID chr17:8499270|8499380
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence LSTRGRSSTRRSRSSMPRSLKATGSGWSWRRKQVSC
Nucleotide Sequence CTGAGCACAAGAGGAAGAAGCTCGACGCGCAGGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCGACAGGCTCAGGGTGGAGCTGGCGGAGAAAGCAAGTAAGCTGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites