CircRNA Information

General Information
circRNA Basic Information
CircID chr18:22176955|22183043
Strand +
CircType exon
Host Gene ENSG00000141448.8;
Algorism CIRI2;
Sequence ACCTGCTGGAGGACCTGTCCGAGAGCCGCGAGTGCGTGAACTGCGGCTCCATCCAGACGCCGCTGTGGCGGCGGGACGGCACCGGCCACTACCTGTGCAACGCCTGCGGGCTCTACAGCAAGATGAACGGCCTCAGCCGGCCCCTCATCAAGCCGCAGAAGCGCGTGCCTTCATCACGGCGGCTTGGATTGTCCTGTGCCAACTGTCACACCACAACTACCACCTTATGGCGCAGAAACGCCGAGGGTGAACCCGTGTGCAATGCTTGTGGACTCTACATGAAACTCCATGGGGTGCCCAGACCACTTGCTATGAAAAAAGAGGGAATTCAAACCAGGAAACGAAAACCTAAGAACATAAATAAATCAAAGACTTGCTCTGGTAATAGCAATAATTCCATTCCCATGACTCCAACTTCCACCTCTTCTAACTCAGATGATTGCAGCAAAAATACTTCCCCCACAACACAACCTACAGCCTCAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr18:22176955|22183043 hsa-miR-140-5p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr18:22176955|22183043 U2AF2 2 9 2
chr18:22176955|22183043 ELAVL1 3 4 2
chr18:22176955|22183043 NUMA1 1 0 0
chr18:22176955|22183043 SF3B4 2 0 0
chr18:22176955|22183043 FAM120A 1 0 0
chr18:22176955|22183043 CNBP 0 0 1
chr18:22176955|22183043 PRPF8 2 0 1
chr18:22176955|22183043 FMR1 0 1 3
chr18:22176955|22183043 FUS 1 0 0
chr18:22176955|22183043 DGCR8 1 0 0
chr18:22176955|22183043 SRSF1 2 0 1
chr18:22176955|22183043 NOP58 3 1 5
chr18:22176955|22183043 U2AF1 0 0 1
chr18:22176955|22183043 NOP56 2 1 1
chr18:22176955|22183043 DDX54 0 0 3
chr18:22176955|22183043 PCBP2 0 0 1
chr18:22176955|22183043 HNRNPD 1 0 0
chr18:22176955|22183043 ACIN1 1 0 0
chr18:22176955|22183043 HNRNPA1 4 5 0
chr18:22176955|22183043 LIN28A 0 0 1
chr18:22176955|22183043 BCCIP 1 0 0
chr18:22176955|22183043 SND1 0 0 1
chr18:22176955|22183043 IGF2BP1 0 2 3
chr18:22176955|22183043 IGF2BP3 0 1 3
chr18:22176955|22183043 IGF2BP2 0 0 3
chr18:22176955|22183043 HNRNPUL1 1 0 0
chr18:22176955|22183043 YTHDC1 0 0 1
chr18:22176955|22183043 BUD13 1 1 2
chr18:22176955|22183043 RBM47 0 0 1
chr18:22176955|22183043 CSTF2T 0 0 1
chr18:22176955|22183043 UPF1 0 1 0
chr18:22176955|22183043 AGO2 0 1 5
chr18:22176955|22183043 AGO1 0 0 1
chr18:22176955|22183043 EWSR1 1 0 1
chr18:22176955|22183043 EIF4A3 3 0 5
chr18:22176955|22183043 FBL 2 0 2