CircNet

General Information

circRNA Basic Information

CircID	chr18:3126701\|3131496
Strand	-
CircType	exon
Host Gene	ENSG00000101605.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATTCACTTGTCATGGATTAGTGACTGGTCAGAGTTATATTTTCCGGGTCAGAGCAGTCAATGCAGCTGGACTTAGTGAATATTCCCAGGATTCAGAAGCTATTGAAGTCAAAGCTGCTATTGGGGGAGGAGTGTCTCCAGATGTGTGTCCCGCACTGAGCGATGAGCCTGGTGGACTAACCGCCTCCAGGGGGCGCGTGCATGAAGCCTCCCCGCCAACCTTCCAGAAAGATGCTTTGCTTGGCAGCAAACCTAACAAACCTTCACTACCCAGTAGCTCTCAAAACCTGGGCCAAACAGAAGTGAGTAAAGTAAGTGAAACAGTTCAGGAAGAGCTTACCCCGCCACCACAGAAAGCGGCTCCTCAGGGGAAAAGTAAGTCTGACCCCCTGAAAAAGAAGACAGACAGAGCACCACCATCTCCACCCTGTGATATCACCTGTCTTGAAAGTTTTCGTGACTCAATGGTTCTTGGATGGAAGCAACCAGATAAGATTGGAGGGGCAGAAATTACTGGCTATTATGTGAACTATCGCGAGGTCATTGATGGGGTACCAGGAAAATGGAGAGAAGCCAATGTCAAGGCTGTCAGTGAGGAGGCATACAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr18:3126701\|3131496	hsa-miR-134-5p	0	1	1
chr18:3126701\|3131496	hsa-miR-122-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr18:3126701\|3131496
ORF Type	ORF1
Protein Length	196
Nucleotide Length	588
Protein Sequence	VTGQSYIFRVRAVNAAGLSEYSQDSEAIEVKAAIGGGVSPDVCPALSDEPGGLTASRGRVHEASPPTFQKDALLGSKPNKPSLPSSSQNLGQTEVSKVSETVQEELTPPPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRDSMVLGWKQPDKIGGAEITGYYVNYREVIDGVPGKWREANVKAVSEEAYK
Nucleotide Sequence	GTGACTGGTCAGAGTTATATTTTCCGGGTCAGAGCAGTCAATGCAGCTGGACTTAGTGAATATTCCCAGGATTCAGAAGCTATTGAAGTCAAAGCTGCTATTGGGGGAGGAGTGTCTCCAGATGTGTGTCCCGCACTGAGCGATGAGCCTGGTGGACTAACCGCCTCCAGGGGGCGCGTGCATGAAGCCTCCCCGCCAACCTTCCAGAAAGATGCTTTGCTTGGCAGCAAACCTAACAAACCTTCACTACCCAGTAGCTCTCAAAACCTGGGCCAAACAGAAGTGAGTAAAGTAAGTGAAACAGTTCAGGAAGAGCTTACCCCGCCACCACAGAAAGCGGCTCCTCAGGGGAAAAGTAAGTCTGACCCCCTGAAAAAGAAGACAGACAGAGCACCACCATCTCCACCCTGTGATATCACCTGTCTTGAAAGTTTTCGTGACTCAATGGTTCTTGGATGGAAGCAACCAGATAAGATTGGAGGGGCAGAAATTACTGGCTATTATGTGAACTATCGCGAGGTCATTGATGGGGTACCAGGAAAATGGAGAGAAGCCAATGTCAAGGCTGTCAGTGAGGAGGCATACAAG

CircID	chr18:3126701\|3131496
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MKPPRQPSRKMLCLAANLTNLHYPVALKTWAKQK*
Nucleotide Sequence	ATGAAGCCTCCCCGCCAACCTTCCAGAAAGATGCTTTGCTTGGCAGCAAACCTAACAAACCTTCACTACCCAGTAGCTCTCAAAACCTGGGCCAAACAGAAGTGA

CircID	chr18:3126701\|3131496
ORF Type	ORF3
Protein Length	33
Nucleotide Length	99
Protein Sequence	MQLDLVNIPRIQKLLKSKLLLGEECLQMCVPH*
Nucleotide Sequence	ATGCAGCTGGACTTAGTGAATATTCCCAGGATTCAGAAGCTATTGAAGTCAAAGCTGCTATTGGGGGAGGAGTGTCTCCAGATGTGTGTCCCGCACTGA

CircID	chr18:3126701\|3131496
ORF Type	ORF4
Protein Length	75
Nucleotide Length	225
Protein Sequence	LLGLLPSKASFWKVGGEASCTRPLEAVSPPGSSLSAGHTSGDTPPPIAALTSIASESWEYSLSPAALTALTRKI*
Nucleotide Sequence	TTGTTAGGTTTGCTGCCAAGCAAAGCATCTTTCTGGAAGGTTGGCGGGGAGGCTTCATGCACGCGCCCCCTGGAGGCGGTTAGTCCACCAGGCTCATCGCTCAGTGCGGGACACACATCTGGAGACACTCCTCCCCCAATAGCAGCTTTGACTTCAATAGCTTCTGAATCCTGGGAATATTCACTAAGTCCAGCTGCATTGACTGCTCTGACCCGGAAAATATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr18:3126701\|3131496	DGCR8	0	1	0
chr18:3126701\|3131496	TAF15	0	1	0
chr18:3126701\|3131496	HNRNPC	2	0	0
chr18:3126701\|3131496	FUS	0	2	0
chr18:3126701\|3131496	EIF4A3	1	1	5

CircRNA Information