CircRNA Information

General Information
circRNA Basic Information
CircID chr18:31830752|31830859
Strand +
CircType exon
Host Gene ENSG00000153339.12;
Algorism CIRI2;
Sequence CTTGGAACTCCTAGGGTATTTGCCAAGTTATCGGACCAAGTTACAGTGTTTGAAACAAGTCAGCAGAATTCCATGCCTGCCCTGATCATCATCAGTAATGTGTGACAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr18:31830752|31830859 hsa-miR-182-5p 0 0 1
chr18:31830752|31830859 hsa-miR-182-3p 0 0 1
chr18:31830752|31830859 hsa-miR-141-5p 0 0 1
chr18:31830752|31830859 hsa-miR-141-3p 0 0 1
chr18:31830752|31830859 hsa-miR-200a-5p 0 0 1
chr18:31830752|31830859 hsa-miR-200a-3p 0 0 1
chr18:31830752|31830859 hsa-miR-377-5p 0 0 1
chr18:31830752|31830859 hsa-miR-377-3p 0 0 1
chr18:31830752|31830859 hsa-miR-383-5p 0 0 1
chr18:31830752|31830859 hsa-miR-383-3p 0 0 1
chr18:31830752|31830859 hsa-miR-133b 0 0 1
chr18:31830752|31830859 hsa-miR-607 0 0 1
chr18:31830752|31830859 hsa-miR-1272 1 1 1
chr18:31830752|31830859 hsa-miR-628-5p 0 0 1
chr18:31830752|31830859 hsa-miR-323-3p 0 0 1
chr18:31830752|31830859 hsa-miR-133a 0 0 1
chr18:31830752|31830859 hsa-miR-4498 1 0 0
chr18:31830752|31830859 hsa-miR-4502 0 1 0
chr18:31830752|31830859 hsa-miR-4710 1 0 0
chr18:31830752|31830859 hsa-miR-6727-5p 1 1 0
chr18:31830752|31830859 hsa-miR-3682-3p 1 0 0
chr18:31830752|31830859 hsa-miR-6753-5p 1 0 0
chr18:31830752|31830859 hsa-miR-3127-5p 0 1 0
chr18:31830752|31830859 hsa-miR-6823-5p 1 0 0
chr18:31830752|31830859 hsa-miR-4446-3p 1 0 0
chr18:31830752|31830859 hsa-miR-4763-3p 1 0 0
chr18:31830752|31830859 hsa-miR-6775-5p 1 0 0
chr18:31830752|31830859 hsa-miR-6879-5p 0 1 0
chr18:31830752|31830859 hsa-miR-4632-5p 1 1 0
chr18:31830752|31830859 hsa-miR-6735-5p 1 1 0
chr18:31830752|31830859 hsa-miR-4436b-3p 0 1 0
chr18:31830752|31830859 hsa-miR-6511b-5p 1 0 0
chr18:31830752|31830859 hsa-miR-6785-5p 1 0 0
chr18:31830752|31830859 hsa-miR-6837-5p 0 1 0
chr18:31830752|31830859 hsa-miR-379-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr18:31830752|31830859
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence LELLGYLPSYRTKLQCLKQVSRIPCLP
Nucleotide Sequence TTGGAACTCCTAGGGTATTTGCCAAGTTATCGGACCAAGTTACAGTGTTTGAAACAAGTCAGCAGAATTCCATGCCTGCCCTGA

CircID chr18:31830752|31830859
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence LSHITDDDQGRHGILLTCFKHCNLVR
Nucleotide Sequence TTGTCACACATTACTGATGATGATCAGGGCAGGCATGGAATTCTGCTGACTTGTTTCAAACACTGTAACTTGGTCCGATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites