CircRNA Information

General Information
circRNA Basic Information
CircID chr18:31832084|31839457
Strand -
CircType exon
Host Gene ENSG00000153339.13;
Algorism find_circ;CIRI2;DCC;
Sequence GAGCCACCAGAAATGGAACTATTGAAATTTTTCAGGCCAGAAAACATTACAGTTTCCTCAAGGCCATCAGTAGAGCAGCTTTCTAGTCTCATTAAAACGAGTCTTCACTACCCAGAATCATTTAATCATCCATTTCATCAAAAAAGCCTTTGTTTAGTACCAGTCACTCTTTTACTTTCCAATTGTTCTAAGGCTGATGTAGATGTCATAGTTGATCTTCGGCATAAAACAACAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr18:31832084|31839457
ORF Type ORF1
Protein Length 74
Nucleotide Length 222
Protein Sequence MELLKFFRPENITVSSRPSVEQLSSLIKTSLHYPESFNHPFHQKSLCLVPVTLLLSNCSKADVDVIVDLRHKTT
Nucleotide Sequence ATGGAACTATTGAAATTTTTCAGGCCAGAAAACATTACAGTTTCCTCAAGGCCATCAGTAGAGCAGCTTTCTAGTCTCATTAAAACGAGTCTTCACTACCCAGAATCATTTAATCATCCATTTCATCAAAAAAGCCTTTGTTTAGTACCAGTCACTCTTTTACTTTCCAATTGTTCTAAGGCTGATGTAGATGTCATAGTTGATCTTCGGCATAAAACAACA

CircID chr18:31832084|31839457
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MRLESCSTDGLEETVMFSGLKNFNSSISGG
Nucleotide Sequence ATGAGACTAGAAAGCTGCTCTACTGATGGCCTTGAGGAAACTGTAATGTTTTCTGGCCTGAAAAATTTCAATAGTTCCATTTCTGGTGGC

CircID chr18:31832084|31839457
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MRLESCSTDGLEETVMFSGLKNFNSSISGG
Nucleotide Sequence ATGAGACTAGAAAGCTGCTCTACTGATGGCCTTGAGGAAACTGTAATGTTTTCTGGCCTGAAAAATTTCAATAGTTCCATTTCTGGTGGC

CircID chr18:31832084|31839457
ORF Type ORF2
Protein Length 74
Nucleotide Length 222
Protein Sequence MELLKFFRPENITVSSRPSVEQLSSLIKTSLHYPESFNHPFHQKSLCLVPVTLLLSNCSKADVDVIVDLRHKTT
Nucleotide Sequence ATGGAACTATTGAAATTTTTCAGGCCAGAAAACATTACAGTTTCCTCAAGGCCATCAGTAGAGCAGCTTTCTAGTCTCATTAAAACGAGTCTTCACTACCCAGAATCATTTAATCATCCATTTCATCAAAAAAGCCTTTGTTTAGTACCAGTCACTCTTTTACTTTCCAATTGTTCTAAGGCTGATGTAGATGTCATAGTTGATCTTCGGCATAAAACAACA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr18:31832084|31839457 NOP56 1 2 0
chr18:31832084|31839457 ELAVL1 2 1 2
chr18:31832084|31839457 UPF1 0 1 0
chr18:31832084|31839457 TAF15 1 0 0
chr18:31832084|31839457 FMR1 1 1 0
chr18:31832084|31839457 NOP58 0 0 3
chr18:31832084|31839457 U2AF1 2 0 1
chr18:31832084|31839457 U2AF2 7 0 4
chr18:31832084|31839457 DDX54 0 0 2
chr18:31832084|31839457 HNRNPK 1 0 0
chr18:31832084|31839457 HNRNPL 1 0 0
chr18:31832084|31839457 PCBP2 2 0 0
chr18:31832084|31839457 PTBP1 0 0 1
chr18:31832084|31839457 HNRNPC 1 0 0
chr18:31832084|31839457 LARP7 0 1 0
chr18:31832084|31839457 SMNDC1 1 0 0
chr18:31832084|31839457 MSI2 0 0 1
chr18:31832084|31839457 HNRNPA1 1 0 0
chr18:31832084|31839457 IGF2BP1 0 0 4
chr18:31832084|31839457 IGF2BP3 0 0 2
chr18:31832084|31839457 IGF2BP2 1 0 2
chr18:31832084|31839457 TARDBP 0 1 0
chr18:31832084|31839457 BUD13 1 0 0
chr18:31832084|31839457 RBM47 1 1 2
chr18:31832084|31839457 CSTF2T 0 0 2
chr18:31832084|31839457 RBM27 0 0 1
chr18:31832084|31839457 TIAL1 1 0 0
chr18:31832084|31839457 EWSR1 0 0 2
chr18:31832084|31839457 EIF4A3 0 2 3
chr18:31832084|31839457 FBL 1 0 1