CircRNA Information

General Information
circRNA Basic Information
CircID chr18:36796729|36796936
Strand -
CircType exon
Host Gene ENSG00000134779.13;
Algorism CIRI2;
Sequence TGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGAGGGAGGGGTGCTCACTTCCGGGTGGGGTTTCCAGAGCCAGAGGAGGATTTAGAAGTGGAGGAAGTGGAGGGACCGGAGGGTCCTGAGGGCCCTTTCTGGCCACCTGCAGGCTGCACAGGCCCTTTCTTTTTTGGGATTACGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr18:36796729|36796936 hsa-miR-149-5p 0 0 1
chr18:36796729|36796936 hsa-miR-149-3p 0 0 1
chr18:36796729|36796936 hsa-miR-328-5p 0 0 1
chr18:36796729|36796936 hsa-miR-328-3p 0 0 1
chr18:36796729|36796936 hsa-miR-587 0 0 1
chr18:36796729|36796936 hsa-miR-596 0 0 1
chr18:36796729|36796936 hsa-miR-605-5p 0 0 1
chr18:36796729|36796936 hsa-miR-605-3p 0 0 1
chr18:36796729|36796936 hsa-miR-634 0 0 1
chr18:36796729|36796936 hsa-miR-657 0 0 1
chr18:36796729|36796936 hsa-miR-760 0 0 1
chr18:36796729|36796936 hsa-miR-1205 0 0 1
chr18:36796729|36796936 hsa-miR-1291 0 0 1
chr18:36796729|36796936 hsa-miR-1299 0 0 1
chr18:36796729|36796936 hsa-miR-525-5p 0 0 1
chr18:36796729|36796936 hsa-miR-876-3p 0 0 1
chr18:36796729|36796936 hsa-miR-875-3p 0 0 1
chr18:36796729|36796936 hsa-miR-520a-5p 0 0 1
chr18:36796729|36796936 hsa-miR-323-5p 0 0 1
chr18:36796729|36796936 hsa-miR-326 1 0 0
chr18:36796729|36796936 hsa-miR-1202 0 1 0
chr18:36796729|36796936 hsa-miR-1470 1 1 0
chr18:36796729|36796936 hsa-miR-2861 0 1 0
chr18:36796729|36796936 hsa-miR-4290 0 1 0
chr18:36796729|36796936 hsa-miR-4469 0 1 0
chr18:36796729|36796936 hsa-miR-5193 1 1 0
chr18:36796729|36796936 hsa-miR-5681a 0 1 0
chr18:36796729|36796936 hsa-miR-143-5p 1 0 0
chr18:36796729|36796936 hsa-miR-4435 0 1 0
chr18:36796729|36796936 hsa-miR-6749-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6836-3p 1 0 0
chr18:36796729|36796936 hsa-miR-766-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6892-3p 1 0 0
chr18:36796729|36796936 hsa-miR-29b-2-5p 0 1 0
chr18:36796729|36796936 hsa-miR-7110-3p 1 1 0
chr18:36796729|36796936 hsa-miR-6845-3p 1 0 0
chr18:36796729|36796936 hsa-miR-877-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6735-3p 0 1 0
chr18:36796729|36796936 hsa-miR-4436b-5p 1 1 0
chr18:36796729|36796936 hsa-miR-5187-3p 0 1 0
chr18:36796729|36796936 hsa-miR-4783-5p 1 0 0
chr18:36796729|36796936 hsa-miR-4667-3p 1 1 0
chr18:36796729|36796936 hsa-miR-6769a-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6811-3p 0 1 0
chr18:36796729|36796936 hsa-miR-4687-5p 1 0 0
chr18:36796729|36796936 hsa-miR-339-3p 1 0 0
chr18:36796729|36796936 hsa-miR-4758-3p 1 1 0
chr18:36796729|36796936 hsa-miR-6887-3p 1 1 0
chr18:36796729|36796936 hsa-miR-6871-3p 1 1 0
chr18:36796729|36796936 hsa-miR-6752-3p 1 0 0
chr18:36796729|36796936 hsa-miR-4749-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6795-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6777-3p 1 0 0
chr18:36796729|36796936 hsa-miR-1292-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6802-3p 1 0 0
chr18:36796729|36796936 hsa-miR-1229-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6734-3p 1 0 0
chr18:36796729|36796936 hsa-miR-3162-3p 1 1 0
chr18:36796729|36796936 hsa-miR-6865-5p 1 1 0
chr18:36796729|36796936 hsa-miR-6815-5p 0 1 0
chr18:36796729|36796936 hsa-miR-3127-3p 1 0 0
chr18:36796729|36796936 hsa-miR-4685-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6727-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6756-3p 1 0 0
chr18:36796729|36796936 hsa-miR-6792-3p 1 1 0
chr18:36796729|36796936 hsa-miR-4723-3p 1 0 0
chr18:36796729|36796936 hsa-miR-483-3p 1 0 0
chr18:36796729|36796936 hsa-miR-10394-5p 0 1 0
chr18:36796729|36796936 hsa-miR-6824-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr18:36796729|36796936
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MCMETTTLELVGSWREGCSLPGGVSRARGGFRSGGSGGTGGS
Nucleotide Sequence CTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGAGGGAGGGGTGCTCACTTCCGGGTGGGGTTTCCAGAGCCAGAGGAGGATTTAGAAGTGGAGGAAGTGGAGGGACCGGAGGGTCCTGA

CircID chr18:36796729|36796936
ORF Type ORF2
Protein Length 56
Nucleotide Length 171
Protein Sequence MCSLQVARKGPQDPPVPPLPPLLNPPLALETPPGSEHPSLQLPTSSRVVVSMHRWP
Nucleotide Sequence CTGTGCAGCCTGCAGGTGGCCAGAAAGGGCCCTCAGGACCCTCCGGTCCCTCCACTTCCTCCACTTCTAAATCCTCCTCTGGCTCTGGAAACCCCACCCGGAAGTGAGCACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites