CircNet

General Information

circRNA Basic Information

CircID	chr18:47046457\|47059654
Strand	+
CircType	exon
Host Gene	ENSG00000167216.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	TGCGAGATGAGGACAGAAGCACGACGAAAAAATCTTCTCATTTTGATTTCGCATTATTTAACACAAGAAGGGTATATCGATACAGCAAATGCTTTGGAGCAAGAAACTAAACTGGGGTTACGACGGTTTGAAGTTTGTGACAACATTGATCTTGAAACTATTTTGATGGAATATGAGAGTTATTATTTTGTAAAATTTCAGAAATACCCCAAAATTGTCAAAAAGTCATCAGACACAGGATGATGAACGACAGTTGTCAAAATCTTCCCAAGATCAATCAGCAGAGGCCCCGGTCCAAAACCACAGCGGGGAAGACAGGGGACACCAAATCGCTCAATAAGGAGCATCCTAATCAGGAGGTAGTTGATAACACTCGCCTGGAAAGTGCCAACTTCGGCCTACATATATCAAGAATCCGTAAAGACAGTGGAGAGGAAAATGCCCACCCACGAAGA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr18:47046457\|47059654
ORF Type	ORF1
Protein Length	79
Nucleotide Length	237
Protein Sequence	MRTEARRKNLLILISHYLTQEGYIDTANALEQETKLGLRRFEVCDNIDLETILMEYESYYFVKFQKYPKIVKKSSDTG*
Nucleotide Sequence	ATGAGGACAGAAGCACGACGAAAAAATCTTCTCATTTTGATTTCGCATTATTTAACACAAGAAGGGTATATCGATACAGCAAATGCTTTGGAGCAAGAAACTAAACTGGGGTTACGACGGTTTGAAGTTTGTGACAACATTGATCTTGAAACTATTTTGATGGAATATGAGAGTTATTATTTTGTAAAATTTCAGAAATACCCCAAAATTGTCAAAAAGTCATCAGACACAGGATGA

CircID	chr18:47046457\|47059654
ORF Type	ORF2
Protein Length	72
Nucleotide Length	216
Protein Sequence	MMNDSCQNLPKINQQRPRSKTTAGKTGDTKSLNKEHPNQEVVDNTRLESANFGLHISRIRKDSGEENAHPRR
Nucleotide Sequence	ATGATGAACGACAGTTGTCAAAATCTTCCCAAGATCAATCAGCAGAGGCCCCGGTCCAAAACCACAGCGGGGAAGACAGGGGACACCAAATCGCTCAATAAGGAGCATCCTAATCAGGAGGTAGTTGATAACACTCGCCTGGAAAGTGCCAACTTCGGCCTACATATATCAAGAATCCGTAAAGACAGTGGAGAGGAAAATGCCCACCCACGAAGA

CircID	chr18:47046457\|47059654
ORF Type	ORF3
Protein Length	50
Nucleotide Length	150
Protein Sequence	MLLIERFGVPCLPRCGFGPGPLLIDLGKILTTVVHHPVSDDFLTILGYF*
Nucleotide Sequence	ATGCTCCTTATTGAGCGATTTGGTGTCCCCTGTCTTCCCCGCTGTGGTTTTGGACCGGGGCCTCTGCTGATTGATCTTGGGAAGATTTTGACAACTGTCGTTCATCATCCTGTGTCTGATGACTTTTTGACAATTTTGGGGTATTTCTGA

CircID	chr18:47046457\|47059654
ORF Type	ORF4
Protein Length	31
Nucleotide Length	93
Protein Sequence	MLSQTSNRRNPSLVSCSKAFAVSIYPSCVK*
Nucleotide Sequence	ATGTTGTCACAAACTTCAAACCGTCGTAACCCCAGTTTAGTTTCTTGCTCCAAAGCATTTGCTGTATCGATATACCCTTCTTGTGTTAAATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr18:47046457\|47059654	NOP58	0	0	1
chr18:47046457\|47059654	NOP56	0	3	1
chr18:47046457\|47059654	DDX54	0	0	1
chr18:47046457\|47059654	FUS	0	1	0
chr18:47046457\|47059654	TARDBP	1	0	0
chr18:47046457\|47059654	TAF15	0	1	0
chr18:47046457\|47059654	IGF2BP2	1	0	2
chr18:47046457\|47059654	EIF4A3	2	2	3
chr18:47046457\|47059654	AGO2	0	0	1

CircRNA Information