CircRNA Information

General Information
circRNA Basic Information
CircID chr18:48861325|48861485
Strand -
CircType exon
Host Gene ENSG00000134030.12;
Algorism CIRI2;
Sequence CTCTGGTCCCTGGCCCTGAACCCTGCCTTCTTCCTCCCTCCACGGTTTCTTCCCAGACTTTCTCAAGCTCCTCCTCACTGCCCTTCCTCCCCAGCCCAGCCTGGGAACACAGATGCCCCGCGGGTAGGAGGCCTCGAGGGAGGAGCCGGGCTGATGCGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr18:48861325|48861485 hsa-miR-34a-5p 0 0 1
chr18:48861325|48861485 hsa-miR-34a-3p 0 0 1
chr18:48861325|48861485 hsa-miR-449a 0 0 1
chr18:48861325|48861485 hsa-miR-539-5p 0 0 1
chr18:48861325|48861485 hsa-miR-539-3p 0 0 1
chr18:48861325|48861485 hsa-miR-580-5p 0 0 1
chr18:48861325|48861485 hsa-miR-580-3p 0 0 1
chr18:48861325|48861485 hsa-miR-449b-5p 0 0 1
chr18:48861325|48861485 hsa-miR-449b-3p 0 0 1
chr18:48861325|48861485 hsa-miR-765 1 1 1
chr18:48861325|48861485 hsa-miR-708-5p 0 0 1
chr18:48861325|48861485 hsa-miR-708-3p 0 0 1
chr18:48861325|48861485 hsa-miR-744-5p 0 0 1
chr18:48861325|48861485 hsa-miR-744-3p 0 0 1
chr18:48861325|48861485 hsa-miR-939-5p 0 0 1
chr18:48861325|48861485 hsa-miR-939-3p 0 0 1
chr18:48861325|48861485 hsa-miR-940 0 0 1
chr18:48861325|48861485 hsa-miR-1321 0 0 1
chr18:48861325|48861485 hsa-miR-28-5p 0 0 1
chr18:48861325|48861485 hsa-miR-1207-5p 1 0 1
chr18:48861325|48861485 hsa-miR-34c-5p 1 0 1
chr18:48861325|48861485 hsa-miR-1300 0 0 1
chr18:48861325|48861485 hsa-miR-184 1 0 0
chr18:48861325|48861485 hsa-miR-637 1 0 0
chr18:48861325|48861485 hsa-miR-663a 1 0 0
chr18:48861325|48861485 hsa-miR-658 1 0 0
chr18:48861325|48861485 hsa-miR-762 1 1 0
chr18:48861325|48861485 hsa-miR-3125 1 0 0
chr18:48861325|48861485 hsa-miR-3132 1 0 0
chr18:48861325|48861485 hsa-miR-3141 1 1 0
chr18:48861325|48861485 hsa-miR-3147 1 1 0
chr18:48861325|48861485 hsa-miR-3154 1 1 0
chr18:48861325|48861485 hsa-miR-3175 1 0 0
chr18:48861325|48861485 hsa-miR-3185 1 1 0
chr18:48861325|48861485 hsa-miR-4298 1 0 0
chr18:48861325|48861485 hsa-miR-4268 0 1 0
chr18:48861325|48861485 hsa-miR-4271 1 0 0
chr18:48861325|48861485 hsa-miR-3652 1 0 0
chr18:48861325|48861485 hsa-miR-3916 1 1 0
chr18:48861325|48861485 hsa-miR-3918 0 1 0
chr18:48861325|48861485 hsa-miR-378g 0 1 0
chr18:48861325|48861485 hsa-miR-4430 1 0 0
chr18:48861325|48861485 hsa-miR-4441 1 0 0
chr18:48861325|48861485 hsa-miR-4469 0 1 0
chr18:48861325|48861485 hsa-miR-4476 1 1 0
chr18:48861325|48861485 hsa-miR-4478 1 0 0
chr18:48861325|48861485 hsa-miR-4486 1 0 0
chr18:48861325|48861485 hsa-miR-4498 1 1 0
chr18:48861325|48861485 hsa-miR-4505 1 1 0
chr18:48861325|48861485 hsa-miR-2392 1 0 0
chr18:48861325|48861485 hsa-miR-4507 1 0 0
chr18:48861325|48861485 hsa-miR-4510 1 1 0
chr18:48861325|48861485 hsa-miR-4516 1 0 0
chr18:48861325|48861485 hsa-miR-4533 1 0 0
chr18:48861325|48861485 hsa-miR-4534 1 0 0
chr18:48861325|48861485 hsa-miR-1587 1 1 0
chr18:48861325|48861485 hsa-miR-4538 1 0 0
chr18:48861325|48861485 hsa-miR-4651 1 0 0
chr18:48861325|48861485 hsa-miR-4656 1 0 0
chr18:48861325|48861485 hsa-miR-4674 1 0 0
chr18:48861325|48861485 hsa-miR-4688 1 0 0
chr18:48861325|48861485 hsa-miR-4689 1 0 0
chr18:48861325|48861485 hsa-miR-4706 1 0 0
chr18:48861325|48861485 hsa-miR-4739 1 1 0
chr18:48861325|48861485 hsa-miR-4741 1 0 0
chr18:48861325|48861485 hsa-miR-4779 1 0 0
chr18:48861325|48861485 hsa-miR-4784 1 0 0
chr18:48861325|48861485 hsa-miR-5090 1 1 0
chr18:48861325|48861485 hsa-miR-5190 1 0 0
chr18:48861325|48861485 hsa-miR-5572 1 0 0
chr18:48861325|48861485 hsa-miR-5698 1 0 0
chr18:48861325|48861485 hsa-miR-5787 1 1 0
chr18:48861325|48861485 hsa-miR-6085 1 0 0
chr18:48861325|48861485 hsa-miR-6086 1 0 0
chr18:48861325|48861485 hsa-miR-6090 1 0 0
chr18:48861325|48861485 hsa-miR-6127 1 1 0
chr18:48861325|48861485 hsa-miR-6132 1 0 0
chr18:48861325|48861485 hsa-miR-6133 1 1 0
chr18:48861325|48861485 hsa-miR-6745 1 0 0
chr18:48861325|48861485 hsa-miR-6860 1 0 0
chr18:48861325|48861485 hsa-miR-8085 1 0 0
chr18:48861325|48861485 hsa-miR-8089 1 1 0
chr18:48861325|48861485 hsa-miR-12118 1 0 0
chr18:48861325|48861485 hsa-miR-12120 1 0 0
chr18:48861325|48861485 hsa-miR-6734-5p 1 0 0
chr18:48861325|48861485 hsa-miR-7155-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6765-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3150a-3p 1 1 0
chr18:48861325|48861485 hsa-miR-6861-5p 1 0 0
chr18:48861325|48861485 hsa-miR-7106-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6825-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6894-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6857-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6799-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6510-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6728-5p 1 0 0
chr18:48861325|48861485 hsa-miR-766-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6833-5p 1 0 0
chr18:48861325|48861485 hsa-miR-7114-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6515-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6089 1 0 0
chr18:48861325|48861485 hsa-miR-3192-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6880-5p 1 1 0
chr18:48861325|48861485 hsa-miR-7847-3p 1 1 0
chr18:48861325|48861485 hsa-miR-4695-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6746-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6727-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6721-5p 1 0 0
chr18:48861325|48861485 hsa-miR-4655-5p 1 0 0
chr18:48861325|48861485 hsa-miR-197-5p 1 0 0
chr18:48861325|48861485 hsa-miR-7845-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3605-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3151-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3180-3p 1 0 0
chr18:48861325|48861485 hsa-miR-6748-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6829-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3190-3p 1 0 0
chr18:48861325|48861485 hsa-miR-23a-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6798-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3126-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6760-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6881-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3150b-3p 1 0 0
chr18:48861325|48861485 hsa-miR-6810-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6786-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6835-5p 1 0 0
chr18:48861325|48861485 hsa-miR-5088-5p 1 0 0
chr18:48861325|48861485 hsa-miR-7109-5p 1 0 0
chr18:48861325|48861485 hsa-miR-1226-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6740-5p 1 0 0
chr18:48861325|48861485 hsa-miR-204-3p 1 1 0
chr18:48861325|48861485 hsa-miR-1229-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6784-5p 1 0 0
chr18:48861325|48861485 hsa-miR-4640-5p 0 1 0
chr18:48861325|48861485 hsa-miR-30c-2-3p 1 0 0
chr18:48861325|48861485 hsa-miR-3127-5p 0 1 0
chr18:48861325|48861485 hsa-miR-1228-5p 1 0 0
chr18:48861325|48861485 hsa-miR-296-3p 1 0 0
chr18:48861325|48861485 hsa-miR-6771-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6823-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3202 1 1 0
chr18:48861325|48861485 hsa-miR-4446-3p 1 0 0
chr18:48861325|48861485 hsa-miR-149-3p 1 1 0
chr18:48861325|48861485 hsa-miR-6824-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3162-5p 0 1 0
chr18:48861325|48861485 hsa-miR-6895-5p 0 1 0
chr18:48861325|48861485 hsa-miR-423-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6832-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3940-3p 0 1 0
chr18:48861325|48861485 hsa-miR-1233-5p 1 0 0
chr18:48861325|48861485 hsa-miR-4763-3p 1 1 0
chr18:48861325|48861485 hsa-miR-6778-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6787-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6812-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6865-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6870-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6893-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6775-5p 1 1 0
chr18:48861325|48861485 hsa-miR-1343-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3180 1 0 0
chr18:48861325|48861485 hsa-miR-5001-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6737-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6743-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6754-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6756-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6803-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6819-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6851-5p 1 0 0
chr18:48861325|48861485 hsa-miR-7107-5p 1 0 0
chr18:48861325|48861485 hsa-miR-10401-5p 1 0 0
chr18:48861325|48861485 hsa-miR-11181-3p 1 1 0
chr18:48861325|48861485 hsa-miR-1249-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6722-3p 1 0 0
chr18:48861325|48861485 hsa-miR-6751-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6763-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6779-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6780a-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6797-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6808-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6875-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6879-5p 1 1 0
chr18:48861325|48861485 hsa-miR-7111-5p 1 1 0
chr18:48861325|48861485 hsa-miR-3620-5p 1 1 0
chr18:48861325|48861485 hsa-miR-4728-5p 1 1 0
chr18:48861325|48861485 hsa-miR-5189-5p 1 0 0
chr18:48861325|48861485 hsa-miR-5196-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6780b-5p 1 0 0
chr18:48861325|48861485 hsa-miR-10396a-5p 1 0 0
chr18:48861325|48861485 hsa-miR-10396b-5p 1 1 0
chr18:48861325|48861485 hsa-miR-1237-5p 1 0 0
chr18:48861325|48861485 hsa-miR-1909-3p 1 0 0
chr18:48861325|48861485 hsa-miR-328-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3689a-3p 1 0 0
chr18:48861325|48861485 hsa-miR-449c-5p 1 0 0
chr18:48861325|48861485 hsa-miR-4632-5p 1 1 0
chr18:48861325|48861485 hsa-miR-4649-5p 1 0 0
chr18:48861325|48861485 hsa-miR-4685-5p 1 0 0
chr18:48861325|48861485 hsa-miR-4725-3p 1 1 0
chr18:48861325|48861485 hsa-miR-4726-5p 0 1 0
chr18:48861325|48861485 hsa-miR-4749-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6735-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6777-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6794-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6795-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6858-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6883-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6887-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6889-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3187-5p 1 0 0
chr18:48861325|48861485 hsa-miR-4436b-3p 1 1 0
chr18:48861325|48861485 hsa-miR-4723-5p 1 0 0
chr18:48861325|48861485 hsa-miR-4758-5p 1 0 0
chr18:48861325|48861485 hsa-miR-3940-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6731-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6856-5p 1 0 0
chr18:48861325|48861485 hsa-miR-4700-5p 1 1 0
chr18:48861325|48861485 hsa-miR-3173-3p 1 0 0
chr18:48861325|48861485 hsa-miR-4646-5p 1 1 0
chr18:48861325|48861485 hsa-miR-4747-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6876-5p 1 1 0
chr18:48861325|48861485 hsa-miR-6891-5p 1 1 0
chr18:48861325|48861485 hsa-miR-4716-3p 1 0 0
chr18:48861325|48861485 hsa-miR-6785-5p 1 0 0
chr18:48861325|48861485 hsa-miR-4667-5p 1 1 0
chr18:48861325|48861485 hsa-miR-3184-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6791-5p 1 0 0
chr18:48861325|48861485 hsa-miR-6829-3p 0 1 0
chr18:48861325|48861485 hsa-miR-10400-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr18:48861325|48861485
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MALNPAFFLPPRFLPRLSQAPPHCPSSPAQPGNTDAPRVGGLEGGAGLMR
Nucleotide Sequence CTGGCCCTGAACCCTGCCTTCTTCCTCCCTCCACGGTTTCTTCCCAGACTTTCTCAAGCTCCTCCTCACTGCCCTTCCTCCCCAGCCCAGCCTGGGAACACAGATGCCCCGCGGGTAGGAGGCCTCGAGGGAGGAGCCGGGCTGATGCGG
CircID chr18:48861325|48861485
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MPSSSLHGFFPDFLKLLLTALPPQPSLGTQMPRG
Nucleotide Sequence CTGCCTTCTTCCTCCCTCCACGGTTTCTTCCCAGACTTTCTCAAGCTCCTCCTCACTGCCCTTCCTCCCCAGCCCAGCCTGGGAACACAGATGCCCCGCGGGTAG
CircID chr18:48861325|48861485
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence LVPGPEPCLLPPSTVSSQTFSSSSSLPFLPSPAWEHRCPAGRRPRGRSRADAG
Nucleotide Sequence CTGGTCCCTGGCCCTGAACCCTGCCTTCTTCCTCCCTCCACGGTTTCTTCCCAGACTTTCTCAAGCTCCTCCTCACTGCCCTTCCTCCCCAGCCCAGCCTGGGAACACAGATGCCCCGCGGGTAGGAGGCCTCGAGGGAGGAGCCGGGCTGATGCGGGG
CircID chr18:48861325|48861485
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MCSQAGLGRKGSEEELEKVWEETVEGGRRQGSGPGTR
Nucleotide Sequence CTGTGTTCCCAGGCTGGGCTGGGGAGGAAGGGCAGTGAGGAGGAGCTTGAGAAAGTCTGGGAAGAAACCGTGGAGGGAGGAAGAAGGCAGGGTTCAGGGCCAGGGACCAGA
CircID chr18:48861325|48861485
ORF Type ORF5
Protein Length 33
Nucleotide Length 99
Protein Sequence MGWGGRAVRRSLRKSGKKPWREEEGRVQGQGPE
Nucleotide Sequence CTGGGCTGGGGAGGAAGGGCAGTGAGGAGGAGCTTGAGAAAGTCTGGGAAGAAACCGTGGAGGGAGGAAGAAGGCAGGGTTCAGGGCCAGGGACCAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab