CircRNA Information

General Information
circRNA Basic Information
CircID chr18:50227385|50227590
Strand -
CircType exon
Host Gene ENSG00000172361.5;
Algorism CIRI2;
Sequence GGTGGAAGCTTACTGGGGCATGCCTTGCGCATGGGATGAATGTTTTGAGGCAGCACTTGATGGGTGGACAGGACCTCCTGGACCTTGTCCAAACACATCTTGTTTGCTGCTACACCTGCTTCAAACTCTCGGCGTTTCTCTTCCTTCTCTGCTTCTTGGGACTGCTGCTGGTAGGCGATTTGCATCTGAAGTTGCTTCCTGTACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr18:50227385|50227590 hsa-miR-15a-5p 0 0 1
chr18:50227385|50227590 hsa-miR-15a-3p 0 0 1
chr18:50227385|50227590 hsa-miR-181c-5p 0 0 1
chr18:50227385|50227590 hsa-miR-181c-3p 0 0 1
chr18:50227385|50227590 hsa-miR-15b-5p 0 0 1
chr18:50227385|50227590 hsa-miR-15b-3p 0 0 1
chr18:50227385|50227590 hsa-miR-195-5p 0 0 1
chr18:50227385|50227590 hsa-miR-195-3p 0 0 1
chr18:50227385|50227590 hsa-miR-302a-5p 0 0 1
chr18:50227385|50227590 hsa-miR-302a-3p 0 0 1
chr18:50227385|50227590 hsa-miR-302b-5p 0 0 1
chr18:50227385|50227590 hsa-miR-302b-3p 0 0 1
chr18:50227385|50227590 hsa-miR-302c-5p 0 0 1
chr18:50227385|50227590 hsa-miR-302c-3p 0 0 1
chr18:50227385|50227590 hsa-miR-302d-5p 0 0 1
chr18:50227385|50227590 hsa-miR-302d-3p 0 0 1
chr18:50227385|50227590 hsa-miR-372-5p 0 0 1
chr18:50227385|50227590 hsa-miR-372-3p 0 0 1
chr18:50227385|50227590 hsa-miR-373-5p 0 0 1
chr18:50227385|50227590 hsa-miR-373-3p 0 0 1
chr18:50227385|50227590 hsa-miR-424-5p 0 0 1
chr18:50227385|50227590 hsa-miR-424-3p 0 0 1
chr18:50227385|50227590 hsa-miR-497-5p 0 0 1
chr18:50227385|50227590 hsa-miR-497-3p 0 0 1
chr18:50227385|50227590 hsa-miR-181d-5p 0 0 1
chr18:50227385|50227590 hsa-miR-181d-3p 0 0 1
chr18:50227385|50227590 hsa-miR-520e-5p 0 0 1
chr18:50227385|50227590 hsa-miR-520e-3p 0 0 1
chr18:50227385|50227590 hsa-miR-520b-5p 0 0 1
chr18:50227385|50227590 hsa-miR-520b-3p 0 0 1
chr18:50227385|50227590 hsa-miR-503-5p 0 0 1
chr18:50227385|50227590 hsa-miR-503-3p 0 0 1
chr18:50227385|50227590 hsa-miR-545-5p 0 0 1
chr18:50227385|50227590 hsa-miR-545-3p 0 0 1
chr18:50227385|50227590 hsa-miR-624-5p 0 0 1
chr18:50227385|50227590 hsa-miR-624-3p 0 0 1
chr18:50227385|50227590 hsa-miR-634 0 0 1
chr18:50227385|50227590 hsa-miR-646 0 0 1
chr18:50227385|50227590 hsa-miR-1323 0 0 1
chr18:50227385|50227590 hsa-miR-891b 0 0 1
chr18:50227385|50227590 hsa-miR-665 0 0 1
chr18:50227385|50227590 hsa-miR-543 0 0 1
chr18:50227385|50227590 hsa-miR-548o-3p 0 0 1
chr18:50227385|50227590 hsa-miR-302e 0 0 1
chr18:50227385|50227590 hsa-miR-1252-5p 0 0 1
chr18:50227385|50227590 hsa-miR-1252-3p 0 0 1
chr18:50227385|50227590 hsa-miR-548o 0 0 1
chr18:50227385|50227590 hsa-miR-127-5p 0 0 1
chr18:50227385|50227590 hsa-miR-512-3p 0 0 1
chr18:50227385|50227590 hsa-miR-576-3p 0 0 1
chr18:50227385|50227590 hsa-miR-520d-3p 0 0 1
chr18:50227385|50227590 hsa-miR-520a-3p 0 0 1
chr18:50227385|50227590 hsa-miR-520c-3p 0 0 1
chr18:50227385|50227590 hsa-miR-16 0 0 1
chr18:50227385|50227590 hsa-miR-181a 0 0 1
chr18:50227385|50227590 hsa-miR-181b 0 0 1
chr18:50227385|50227590 hsa-miR-922 1 0 0
chr18:50227385|50227590 hsa-miR-936 1 0 0
chr18:50227385|50227590 hsa-miR-1202 1 0 0
chr18:50227385|50227590 hsa-miR-3132 1 0 0
chr18:50227385|50227590 hsa-miR-3154 1 0 0
chr18:50227385|50227590 hsa-miR-4274 0 1 0
chr18:50227385|50227590 hsa-miR-4468 1 0 0
chr18:50227385|50227590 hsa-miR-4516 1 0 0
chr18:50227385|50227590 hsa-miR-4533 1 0 0
chr18:50227385|50227590 hsa-miR-4689 1 0 0
chr18:50227385|50227590 hsa-miR-4706 1 0 0
chr18:50227385|50227590 hsa-miR-5683 0 1 0
chr18:50227385|50227590 hsa-miR-6081 1 0 0
chr18:50227385|50227590 hsa-miR-6124 1 0 0
chr18:50227385|50227590 hsa-miR-8060 1 0 0
chr18:50227385|50227590 hsa-miR-8085 1 0 0
chr18:50227385|50227590 hsa-miR-12120 1 0 0
chr18:50227385|50227590 hsa-miR-6510-5p 1 1 0
chr18:50227385|50227590 hsa-miR-6804-5p 1 0 0
chr18:50227385|50227590 hsa-miR-3934-5p 0 1 0
chr18:50227385|50227590 hsa-miR-4695-5p 1 0 0
chr18:50227385|50227590 hsa-let-7i-3p 0 1 0
chr18:50227385|50227590 hsa-miR-2467-3p 1 0 0
chr18:50227385|50227590 hsa-miR-3150b-3p 1 0 0
chr18:50227385|50227590 hsa-miR-204-3p 1 0 0
chr18:50227385|50227590 hsa-miR-4732-5p 1 0 0
chr18:50227385|50227590 hsa-miR-7850-5p 0 1 0
chr18:50227385|50227590 hsa-miR-181b-5p 0 1 0
chr18:50227385|50227590 hsa-miR-7846-3p 1 1 0
chr18:50227385|50227590 hsa-miR-6832-5p 1 0 0
chr18:50227385|50227590 hsa-miR-6814-5p 1 0 0
chr18:50227385|50227590 hsa-miR-4746-5p 1 0 0
chr18:50227385|50227590 hsa-miR-1207-5p 1 0 0
chr18:50227385|50227590 hsa-miR-6893-5p 0 1 0
chr18:50227385|50227590 hsa-miR-6752-5p 1 0 0
chr18:50227385|50227590 hsa-miR-6797-5p 1 0 0
chr18:50227385|50227590 hsa-miR-5196-5p 1 0 0
chr18:50227385|50227590 hsa-miR-6858-5p 1 0 0
chr18:50227385|50227590 hsa-miR-4436b-3p 1 0 0
chr18:50227385|50227590 hsa-miR-6758-5p 1 0 0
chr18:50227385|50227590 hsa-miR-6856-5p 1 0 0
chr18:50227385|50227590 hsa-miR-4646-5p 1 0 0
chr18:50227385|50227590 hsa-miR-6884-5p 1 0 0
chr18:50227385|50227590 hsa-miR-6838-5p 0 1 0
chr18:50227385|50227590 hsa-miR-514b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr18:50227385|50227590
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MSKHILFAATPASNSRRFSSFSASWDCCW
Nucleotide Sequence TTGTCCAAACACATCTTGTTTGCTGCTACACCTGCTTCAAACTCTCGGCGTTTCTCTTCCTTCTCTGCTTCTTGGGACTGCTGCTGGTAG
CircID chr18:50227385|50227590
ORF Type ORF2
Protein Length 62
Nucleotide Length 186
Protein Sequence MPCAWDECFEAALDGWTGPPGPCPNTSCLLLHLLQTLGVSLPSLLLGTAAGRRFASEVASCT
Nucleotide Sequence ATGCCTTGCGCATGGGATGAATGTTTTGAGGCAGCACTTGATGGGTGGACAGGACCTCCTGGACCTTGTCCAAACACATCTTGTTTGCTGCTACACCTGCTTCAAACTCTCGGCGTTTCTCTTCCTTCTCTGCTTCTTGGGACTGCTGCTGGTAGGCGATTTGCATCTGAAGTTGCTTCCTGTACT
CircID chr18:50227385|50227590
ORF Type ORF3
Protein Length 57
Nucleotide Length 171
Protein Sequence MNVLRQHLMGGQDLLDLVQTHLVCCYTCFKLSAFLFLLCFLGLLLVGDLHLKLLPVL
Nucleotide Sequence ATGAATGTTTTGAGGCAGCACTTGATGGGTGGACAGGACCTCCTGGACCTTGTCCAAACACATCTTGTTTGCTGCTACACCTGCTTCAAACTCTCGGCGTTTCTCTTCCTTCTCTGCTTCTTGGGACTGCTGCTGGTAGGCGATTTGCATCTGAAGTTGCTTCCTGTACTC
CircID chr18:50227385|50227590
ORF Type ORF4
Protein Length 61
Nucleotide Length 183
Protein Sequence MQIAYQQQSQEAEKEEKRREFEAGVAANKMCLDKVQEVLSTHQVLPQNIHPMRKACPSKLP
Nucleotide Sequence ATGCAAATCGCCTACCAGCAGCAGTCCCAAGAAGCAGAGAAGGAAGAGAAACGCCGAGAGTTTGAAGCAGGTGTAGCAGCAAACAAGATGTGTTTGGACAAGGTCCAGGAGGTCCTGTCCACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab