CircRNA Information

General Information
circRNA Basic Information
CircID chr18:54152990|54153170
Strand +
CircType exon
Host Gene ENSG00000134046.10;
Algorism CIRI2;
Sequence CCCACCTCTCCTCCATCCCCACGATCACTGCCTTCATATGAACTGCCTTTCCTGTCCTCTGGACTTTCAGTGGCTTCCTTTTTTGCTCACCTGTCCACTTTCTTCCCCTTCCCTCTCTCCATCCCTCCACATAGTCATCAGAAAGATCATCAAAACAGGCAAATGTGACTGTATTATTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr18:54152990|54153170 hsa-miR-23a-5p 0 0 1
chr18:54152990|54153170 hsa-miR-23a-3p 0 0 1
chr18:54152990|54153170 hsa-miR-198 1 1 1
chr18:54152990|54153170 hsa-miR-34a-5p 0 0 1
chr18:54152990|54153170 hsa-miR-34a-3p 0 0 1
chr18:54152990|54153170 hsa-miR-23b-5p 0 0 1
chr18:54152990|54153170 hsa-miR-23b-3p 0 0 1
chr18:54152990|54153170 hsa-miR-185-5p 0 0 1
chr18:54152990|54153170 hsa-miR-185-3p 0 0 1
chr18:54152990|54153170 hsa-miR-449a 1 1 1
chr18:54152990|54153170 hsa-miR-552-5p 0 0 1
chr18:54152990|54153170 hsa-miR-552-3p 0 0 1
chr18:54152990|54153170 hsa-miR-449b-5p 0 0 1
chr18:54152990|54153170 hsa-miR-449b-3p 0 0 1
chr18:54152990|54153170 hsa-miR-655-5p 0 0 1
chr18:54152990|54153170 hsa-miR-655-3p 0 0 1
chr18:54152990|54153170 hsa-miR-765 1 1 1
chr18:54152990|54153170 hsa-miR-548p 0 0 1
chr18:54152990|54153170 hsa-miR-671-5p 1 1 1
chr18:54152990|54153170 hsa-miR-125a-3p 1 0 1
chr18:54152990|54153170 hsa-miR-491-5p 1 0 1
chr18:54152990|54153170 hsa-miR-299-3p 0 0 1
chr18:54152990|54153170 hsa-miR-525-5p 0 0 1
chr18:54152990|54153170 hsa-miR-520a-5p 0 1 1
chr18:54152990|54153170 hsa-miR-34c-5p 0 0 1
chr18:54152990|54153170 hsa-miR-369-3p 0 0 1
chr18:54152990|54153170 hsa-miR-1245 0 0 1
chr18:54152990|54153170 hsa-miR-184 1 0 0
chr18:54152990|54153170 hsa-miR-608 1 0 0
chr18:54152990|54153170 hsa-miR-612 1 0 0
chr18:54152990|54153170 hsa-miR-650 1 0 0
chr18:54152990|54153170 hsa-miR-658 1 0 0
chr18:54152990|54153170 hsa-miR-1182 1 0 0
chr18:54152990|54153170 hsa-miR-1268a 1 0 0
chr18:54152990|54153170 hsa-miR-1270 1 0 0
chr18:54152990|54153170 hsa-miR-1827 1 0 0
chr18:54152990|54153170 hsa-miR-3125 1 1 0
chr18:54152990|54153170 hsa-miR-3132 1 0 0
chr18:54152990|54153170 hsa-miR-3138 1 1 0
chr18:54152990|54153170 hsa-miR-3141 1 0 0
chr18:54152990|54153170 hsa-miR-3154 1 0 0
chr18:54152990|54153170 hsa-miR-1193 1 0 0
chr18:54152990|54153170 hsa-miR-3175 1 0 0
chr18:54152990|54153170 hsa-miR-3185 1 0 0
chr18:54152990|54153170 hsa-miR-4299 1 0 0
chr18:54152990|54153170 hsa-miR-4298 1 0 0
chr18:54152990|54153170 hsa-miR-4271 1 1 0
chr18:54152990|54153170 hsa-miR-3612 1 0 0
chr18:54152990|54153170 hsa-miR-3911 1 0 0
chr18:54152990|54153170 hsa-miR-3916 1 1 0
chr18:54152990|54153170 hsa-miR-1268b 1 0 0
chr18:54152990|54153170 hsa-miR-4430 1 0 0
chr18:54152990|54153170 hsa-miR-4436a 1 0 0
chr18:54152990|54153170 hsa-miR-4440 1 0 0
chr18:54152990|54153170 hsa-miR-4443 1 0 0
chr18:54152990|54153170 hsa-miR-4462 1 0 0
chr18:54152990|54153170 hsa-miR-4476 1 0 0
chr18:54152990|54153170 hsa-miR-4491 1 0 0
chr18:54152990|54153170 hsa-miR-4510 1 0 0
chr18:54152990|54153170 hsa-miR-4516 1 0 0
chr18:54152990|54153170 hsa-miR-4533 1 0 0
chr18:54152990|54153170 hsa-miR-4534 1 1 0
chr18:54152990|54153170 hsa-miR-4644 1 1 0
chr18:54152990|54153170 hsa-miR-4651 1 0 0
chr18:54152990|54153170 hsa-miR-4657 1 1 0
chr18:54152990|54153170 hsa-miR-4658 1 0 0
chr18:54152990|54153170 hsa-miR-4688 1 0 0
chr18:54152990|54153170 hsa-miR-4689 1 0 0
chr18:54152990|54153170 hsa-miR-4692 1 0 0
chr18:54152990|54153170 hsa-miR-4706 1 0 0
chr18:54152990|54153170 hsa-miR-4710 1 0 0
chr18:54152990|54153170 hsa-miR-4739 1 1 0
chr18:54152990|54153170 hsa-miR-4779 1 0 0
chr18:54152990|54153170 hsa-miR-4784 0 1 0
chr18:54152990|54153170 hsa-miR-5191 1 0 0
chr18:54152990|54153170 hsa-miR-5192 1 0 0
chr18:54152990|54153170 hsa-miR-5194 1 0 0
chr18:54152990|54153170 hsa-miR-5698 1 0 0
chr18:54152990|54153170 hsa-miR-5739 1 0 0
chr18:54152990|54153170 hsa-miR-5787 1 0 0
chr18:54152990|54153170 hsa-miR-6090 1 0 0
chr18:54152990|54153170 hsa-miR-6125 1 0 0
chr18:54152990|54153170 hsa-miR-6127 1 0 0
chr18:54152990|54153170 hsa-miR-6130 1 0 0
chr18:54152990|54153170 hsa-miR-6133 1 0 0
chr18:54152990|54153170 hsa-miR-6745 1 0 0
chr18:54152990|54153170 hsa-miR-8057 1 0 0
chr18:54152990|54153170 hsa-miR-8079 0 1 0
chr18:54152990|54153170 hsa-miR-8082 1 1 0
chr18:54152990|54153170 hsa-miR-8085 1 0 0
chr18:54152990|54153170 hsa-miR-8089 1 0 0
chr18:54152990|54153170 hsa-miR-9500 1 0 0
chr18:54152990|54153170 hsa-miR-12114 1 0 0
chr18:54152990|54153170 hsa-miR-12115 1 0 0
chr18:54152990|54153170 hsa-miR-12119 1 0 0
chr18:54152990|54153170 hsa-miR-4433b-3p 1 0 0
chr18:54152990|54153170 hsa-miR-6734-5p 1 0 0
chr18:54152990|54153170 hsa-miR-7106-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6825-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6894-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6857-5p 0 1 0
chr18:54152990|54153170 hsa-miR-6728-5p 1 0 0
chr18:54152990|54153170 hsa-miR-8071 1 0 0
chr18:54152990|54153170 hsa-miR-6833-5p 1 0 0
chr18:54152990|54153170 hsa-miR-5187-5p 1 0 0
chr18:54152990|54153170 hsa-miR-7114-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6515-5p 1 1 0
chr18:54152990|54153170 hsa-miR-6089 1 0 0
chr18:54152990|54153170 hsa-miR-6757-5p 1 1 0
chr18:54152990|54153170 hsa-miR-6873-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6880-5p 1 1 0
chr18:54152990|54153170 hsa-miR-7847-3p 1 1 0
chr18:54152990|54153170 hsa-miR-4695-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6746-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6730-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6721-5p 1 0 0
chr18:54152990|54153170 hsa-miR-197-5p 1 0 0
chr18:54152990|54153170 hsa-miR-7845-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6783-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6742-5p 1 0 0
chr18:54152990|54153170 hsa-miR-3605-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6716-5p 1 0 0
chr18:54152990|54153170 hsa-miR-3151-5p 1 0 0
chr18:54152990|54153170 hsa-miR-1292-5p 1 0 0
chr18:54152990|54153170 hsa-miR-3180-3p 1 0 0
chr18:54152990|54153170 hsa-miR-6748-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6796-5p 1 1 0
chr18:54152990|54153170 hsa-miR-656-5p 1 0 0
chr18:54152990|54153170 hsa-miR-3190-3p 1 0 0
chr18:54152990|54153170 hsa-miR-6805-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6827-5p 1 1 0
chr18:54152990|54153170 hsa-miR-6798-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6760-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6881-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6782-5p 1 1 0
chr18:54152990|54153170 hsa-miR-6810-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6835-5p 1 0 0
chr18:54152990|54153170 hsa-miR-7109-5p 1 0 0
chr18:54152990|54153170 hsa-miR-1226-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4786-3p 1 0 0
chr18:54152990|54153170 hsa-miR-4640-5p 1 0 0
chr18:54152990|54153170 hsa-miR-296-3p 1 0 0
chr18:54152990|54153170 hsa-miR-6771-5p 1 0 0
chr18:54152990|54153170 hsa-miR-92b-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6847-5p 1 1 0
chr18:54152990|54153170 hsa-miR-3202 1 1 0
chr18:54152990|54153170 hsa-miR-4446-3p 1 0 0
chr18:54152990|54153170 hsa-miR-149-3p 1 0 0
chr18:54152990|54153170 hsa-miR-6717-5p 1 0 0
chr18:54152990|54153170 hsa-miR-3616-3p 1 0 0
chr18:54152990|54153170 hsa-miR-6824-5p 1 0 0
chr18:54152990|54153170 hsa-miR-5010-5p 1 0 0
chr18:54152990|54153170 hsa-miR-5584-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4800-5p 1 0 0
chr18:54152990|54153170 hsa-miR-7112-5p 1 0 0
chr18:54152990|54153170 hsa-miR-423-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4746-3p 1 0 0
chr18:54152990|54153170 hsa-miR-598-5p 1 0 0
chr18:54152990|54153170 hsa-miR-483-5p 1 0 0
chr18:54152990|54153170 hsa-miR-5004-5p 1 1 0
chr18:54152990|54153170 hsa-miR-1207-5p 1 0 0
chr18:54152990|54153170 hsa-miR-1233-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4763-3p 1 0 0
chr18:54152990|54153170 hsa-miR-6778-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6787-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6812-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6816-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6870-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6893-5p 1 0 0
chr18:54152990|54153170 hsa-miR-1343-5p 1 0 0
chr18:54152990|54153170 hsa-miR-5001-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6737-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6743-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6754-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6756-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6803-5p 0 1 0
chr18:54152990|54153170 hsa-miR-6819-5p 1 0 0
chr18:54152990|54153170 hsa-miR-7110-5p 0 1 0
chr18:54152990|54153170 hsa-miR-11181-3p 1 1 0
chr18:54152990|54153170 hsa-miR-1249-5p 1 1 0
chr18:54152990|54153170 hsa-miR-6722-3p 1 0 0
chr18:54152990|54153170 hsa-miR-6763-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6779-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6780a-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6797-5p 1 1 0
chr18:54152990|54153170 hsa-miR-6808-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6875-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6879-5p 1 1 0
chr18:54152990|54153170 hsa-miR-7111-5p 1 1 0
chr18:54152990|54153170 hsa-miR-4728-5p 1 1 0
chr18:54152990|54153170 hsa-miR-5196-5p 1 1 0
chr18:54152990|54153170 hsa-miR-6780b-5p 1 1 0
chr18:54152990|54153170 hsa-miR-328-5p 1 0 0
chr18:54152990|54153170 hsa-miR-449c-5p 1 1 0
chr18:54152990|54153170 hsa-miR-4632-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4649-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4725-3p 1 0 0
chr18:54152990|54153170 hsa-miR-6729-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6735-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6738-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6794-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6795-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6846-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6848-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6858-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6883-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6887-5p 1 0 0
chr18:54152990|54153170 hsa-miR-3187-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4436b-3p 1 1 0
chr18:54152990|54153170 hsa-miR-4723-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6831-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4769-5p 1 1 0
chr18:54152990|54153170 hsa-miR-34b-5p 1 1 0
chr18:54152990|54153170 hsa-miR-6511a-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6511b-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6731-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6758-5p 1 1 0
chr18:54152990|54153170 hsa-miR-6856-5p 1 0 0
chr18:54152990|54153170 hsa-miR-1914-3p 1 0 0
chr18:54152990|54153170 hsa-miR-4700-5p 1 0 0
chr18:54152990|54153170 hsa-miR-3679-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4747-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6876-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6891-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4472 1 0 0
chr18:54152990|54153170 hsa-miR-4716-3p 1 0 0
chr18:54152990|54153170 hsa-miR-6750-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6785-5p 1 0 0
chr18:54152990|54153170 hsa-miR-4667-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6790-5p 1 0 0
chr18:54152990|54153170 hsa-miR-6849-5p 1 1 0
chr18:54152990|54153170 hsa-miR-135a-2-3p 1 0 0
chr18:54152990|54153170 hsa-miR-2682-5p 0 1 0
chr18:54152990|54153170 hsa-miR-4704-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr18:54152990|54153170
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence MPSYELPFLSSGLSVASFFAHLSTFFPFPLSIPPHSHQKDHQNRQM
Nucleotide Sequence CTGCCTTCATATGAACTGCCTTTCCTGTCCTCTGGACTTTCAGTGGCTTCCTTTTTTGCTCACCTGTCCACTTTCTTCCCCTTCCCTCTCTCCATCCCTCCACATAGTCATCAGAAAGATCATCAAAACAGGCAAATGTGA
CircID chr18:54152990|54153170
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MNCLSCPLDFQWLPFLLTCPLSSPSLSPSLHIVIRKIIKTGKCDCIIS
Nucleotide Sequence ATGAACTGCCTTTCCTGTCCTCTGGACTTTCAGTGGCTTCCTTTTTTGCTCACCTGTCCACTTTCTTCCCCTTCCCTCTCTCCATCCCTCCACATAGTCATCAGAAAGATCATCAAAACAGGCAAATGTGACTGTATTATTTCC
CircID chr18:54152990|54153170
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MPVLMIFLMTMWRDGEREGEESGQVSKKGSH
Nucleotide Sequence TTGCCTGTTTTGATGATCTTTCTGATGACTATGTGGAGGGATGGAGAGAGGGAAGGGGAAGAAAGTGGACAGGTGAGCAAAAAAGGAAGCCACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab