CircRNA Information

General Information
circRNA Basic Information
CircID chr18:62830035|62975625
Strand +
CircType exon
Host Gene ENSG00000081913.13;
Algorism CIRI2;
Sequence GAAACTTGGAACTGCTGGGCAGAAGCTTGGTGGTGCCGCTGTCCTTTGTCATATCAAGCATGACCCTGTGGATCCAGGAGGATCCTTCACCTTGACCTCTGCTAATGTGGGCAAGTGCCAAACAGTTCTCTGTCGAAATGGAAAGCCGCTGCCTCTGTCCAGATCTTACATCATGAGCTGTGAAGAAGAGCTGAAGAGGATTAAACAGCACAAGGCCATTATCACTGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
CircID chr18:62830035|62975625
ORF Type ORF1
Protein Length 70
Nucleotide Length 210
Protein Sequence VLFNPLQLFFTAHDVRSGQRQRLSISTENCLALAHISRGQGEGSSWIHRVMLDMTKDSGTTKLLPSSSKF
Nucleotide Sequence GTGCTGTTTAATCCTCTTCAGCTCTTCTTCACAGCTCATGATGTAAGATCTGGACAGAGGCAGCGGCTTTCCATTTCGACAGAGAACTGTTTGGCACTTGCCCACATTAGCAGAGGTCAAGGTGAAGGATCCTCCTGGATCCACAGGGTCATGCTTGATATGACAAAGGACAGCGGCACCACCAAGCTTCTGCCCAGCAGTTCCAAGTTT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr18:62830035|62975625 FBL 1 1 2
chr18:62830035|62975625 ELAVL1 0 0 2
chr18:62830035|62975625 U2AF2 1 0 0
chr18:62830035|62975625 FMR1 0 0 3
chr18:62830035|62975625 TARDBP 0 1 0
chr18:62830035|62975625 RBM10 1 0 0
chr18:62830035|62975625 IGF2BP1 0 0 1
chr18:62830035|62975625 IGF2BP2 0 0 1
chr18:62830035|62975625 EIF4A3 1 2 3
chr18:62830035|62975625 NOP58 0 0 2