CircNet

General Information

circRNA Basic Information

CircID	chr18:63399242\|63400703
Strand	-
CircType	exon
Host Gene	ENSG00000119541.9;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCAAGAGAACACCTTGGAGGGGAATCCTATTATTTGGGCCGCCTGGAACAGGAAAGTCCTACTTAGCCAAAGCTGTAGCAACAGAAGCCAACAACTCAACATTTTTTTCAATATCTTCCTCTGATCTTGTTTCTAAGTGGCTAGGTGAAAGTGAAAAGGGTTGGTGTAGACAATGATGGAATTTTGGTTCTGGGAGCTACAAATATACCCTGGGTTCTGGATTCTGCCATTAGGCGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr18:63399242\|63400703
ORF Type	ORF1
Protein Length	34
Nucleotide Length	102
Protein Sequence	MLSCWLLLLQLWLSRTFLFQAAQIIGFPSKVFSC
Nucleotide Sequence	ATGTTGAGTTGTTGGCTTCTGTTGCTACAGCTTTGGCTAAGTAGGACTTTCCTGTTCCAGGCGGCCCAAATAATAGGATTCCCCTCCAAGGTGTTCTCTTGC

CircID	chr18:63399242\|63400703
ORF Type	ORF2
Protein Length	30
Nucleotide Length	90
Protein Sequence	MAESRTQGIFVAPRTKIPSLSTPTLFTFT*
Nucleotide Sequence	ATGGCAGAATCCAGAACCCAGGGTATATTTGTAGCTCCCAGAACCAAAATTCCATCATTGTCTACACCAACCCTTTTCACTTTCACCTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr18:63399242\|63400703	NOP56	2	2	1
chr18:63399242\|63400703	FUS	1	0	1
chr18:63399242\|63400703	FAM120A	0	0	1
chr18:63399242\|63400703	PRPF8	0	2	0
chr18:63399242\|63400703	TAF15	0	1	0
chr18:63399242\|63400703	FMR1	0	0	3
chr18:63399242\|63400703	CPSF6	0	0	1
chr18:63399242\|63400703	ELAVL1	0	2	5
chr18:63399242\|63400703	SRSF1	1	1	4
chr18:63399242\|63400703	NOP58	1	0	2
chr18:63399242\|63400703	U2AF1	0	0	1
chr18:63399242\|63400703	U2AF2	5	6	2
chr18:63399242\|63400703	SRSF9	0	0	3
chr18:63399242\|63400703	DDX54	0	1	5
chr18:63399242\|63400703	RBM10	0	2	0
chr18:63399242\|63400703	PTBP1	0	0	1
chr18:63399242\|63400703	HNRNPC	1	1	0
chr18:63399242\|63400703	TRA2A	0	0	1
chr18:63399242\|63400703	DHX9	1	0	0
chr18:63399242\|63400703	SMNDC1	0	0	1
chr18:63399242\|63400703	LIN28B	0	1	2
chr18:63399242\|63400703	FXR1	0	0	1
chr18:63399242\|63400703	SND1	0	0	2
chr18:63399242\|63400703	IGF2BP1	1	0	2
chr18:63399242\|63400703	IGF2BP3	0	0	1
chr18:63399242\|63400703	IGF2BP2	0	0	3
chr18:63399242\|63400703	TARDBP	0	0	1
chr18:63399242\|63400703	YTHDC1	0	0	2
chr18:63399242\|63400703	BUD13	0	0	1
chr18:63399242\|63400703	RBM47	0	0	1
chr18:63399242\|63400703	TIA1	0	0	1
chr18:63399242\|63400703	ILF3	0	3	0
chr18:63399242\|63400703	AGO2	1	0	3
chr18:63399242\|63400703	EWSR1	0	0	1
chr18:63399242\|63400703	EIF4A3	0	1	3
chr18:63399242\|63400703	FBL	0	2	3

CircRNA Information