CircNet

General Information

circRNA Basic Information

CircID	chr18:668819\|669002
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CAAATATTCAAAGGACTGTGTAGAAGAGGAAAAAGACTTTGTTAGGGCTCCAGAGGACAGAGCCAGGAGTCAGACAGGGCCTTGAACTCAACCCACCGAGATCTGCAAACTTTGCAGGATGCACCAGATGTCTTGTAGCCATGGGTCAAGGGGGGACCCTGGGTAAGAGACTGTAATAGATGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr18:668819\|669002	hsa-miR-149-5p	0	0	1
chr18:668819\|669002	hsa-miR-149-3p	0	0	1
chr18:668819\|669002	hsa-miR-345-5p	0	0	1
chr18:668819\|669002	hsa-miR-345-3p	0	0	1
chr18:668819\|669002	hsa-miR-495-5p	0	0	1
chr18:668819\|669002	hsa-miR-495-3p	0	0	1
chr18:668819\|669002	hsa-miR-527	0	0	1
chr18:668819\|669002	hsa-miR-561-5p	0	0	1
chr18:668819\|669002	hsa-miR-561-3p	0	0	1
chr18:668819\|669002	hsa-miR-641	0	0	1
chr18:668819\|669002	hsa-miR-1264	0	0	1
chr18:668819\|669002	hsa-miR-760	0	1	1
chr18:668819\|669002	hsa-miR-1238-5p	0	0	1
chr18:668819\|669002	hsa-miR-1238-3p	0	0	1
chr18:668819\|669002	hsa-miR-1291	0	1	1
chr18:668819\|669002	hsa-miR-324-5p	0	0	1
chr18:668819\|669002	hsa-miR-146b-3p	0	0	1
chr18:668819\|669002	hsa-miR-339-5p	0	1	1
chr18:668819\|669002	hsa-miR-582-5p	0	0	1
chr18:668819\|669002	hsa-miR-518a-5p	0	0	1
chr18:668819\|669002	hsa-miR-1233	0	0	1
chr18:668819\|669002	hsa-miR-516b	0	0	1
chr18:668819\|669002	hsa-miR-3909	1	1	0
chr18:668819\|669002	hsa-miR-4507	0	1	0
chr18:668819\|669002	hsa-miR-4682	1	0	0
chr18:668819\|669002	hsa-miR-4780	0	1	0
chr18:668819\|669002	hsa-miR-8057	0	1	0
chr18:668819\|669002	hsa-miR-187-5p	0	1	0
chr18:668819\|669002	hsa-miR-6793-5p	0	1	0
chr18:668819\|669002	hsa-miR-877-3p	0	1	0
chr18:668819\|669002	hsa-miR-296-3p	0	1	0
chr18:668819\|669002	hsa-miR-3678-3p	0	1	0
chr18:668819\|669002	hsa-miR-3120-5p	0	1	0
chr18:668819\|669002	hsa-miR-4652-3p	1	0	0
chr18:668819\|669002	hsa-miR-6769a-5p	1	0	0
chr18:668819\|669002	hsa-miR-4685-5p	1	0	0
chr18:668819\|669002	hsa-miR-3940-5p	1	1	0
chr18:668819\|669002	hsa-miR-2682-3p	1	1	0
chr18:668819\|669002	hsa-miR-6775-3p	1	1	0
chr18:668819\|669002	hsa-miR-10397-5p	0	1	0
chr18:668819\|669002	hsa-miR-6781-3p	0	1	0
chr18:668819\|669002	hsa-miR-6764-5p	0	1	0
chr18:668819\|669002	hsa-miR-5699-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr18:668819\|669002
ORF Type	ORF1
Protein Length	45
Nucleotide Length	138
Protein Sequence	MLGLQRTEPGVRQGLELNPPRSANFAGCTRCLVAMGQGGTLGKRL
Nucleotide Sequence	TTGTTAGGGCTCCAGAGGACAGAGCCAGGAGTCAGACAGGGCCTTGAACTCAACCCACCGAGATCTGCAAACTTTGCAGGATGCACCAGATGTCTTGTAGCCATGGGTCAAGGGGGGACCCTGGGTAAGAGACTGTAA

CircID	chr18:668819\|669002
ORF Type	ORF2
Protein Length	44
Nucleotide Length	135
Protein Sequence	MATRHLVHPAKFADLGGLSSRPCLTPGSVLWSPNKVFFLFYTVL
Nucleotide Sequence	ATGGCTACAAGACATCTGGTGCATCCTGCAAAGTTTGCAGATCTCGGTGGGTTGAGTTCAAGGCCCTGTCTGACTCCTGGCTCTGTCCTCTGGAGCCCTAACAAAGTCTTTTTCCTCTTCTACACAGTCCTTTGA

CircID	chr18:668819\|669002
ORF Type	ORF3
Protein Length	35
Nucleotide Length	108
Protein Sequence	MTHGYKTSGASCKVCRSRWVEFKALSDSWLCPLEP
Nucleotide Sequence	TTGACCCATGGCTACAAGACATCTGGTGCATCCTGCAAAGTTTGCAGATCTCGGTGGGTTGAGTTCAAGGCCCTGTCTGACTCCTGGCTCTGTCCTCTGGAGCCCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information