CircRNA Information

General Information
circRNA Basic Information
CircID chr18:79420644|79420848
Strand +
CircType exon
Host Gene ENSG00000279637.1;
Algorism CIRI2;
Sequence CTGGAAACGCATCCGCCTCTTCCCCTCTGCAGCGACGTCACCTGGAAACGCGTTCCCCTCTTGCCCTCTGCAACGACATCGCCTGGAAACGCGTCCTCCTCTTCCTCTCTGCAGCAACGTCGCCTGGAAACACGTCCTCCTCTTCCTCTCTGCAGCCATGCTGCCTGGAAATGCGACCCCCTCTTCCTCTCTGCAGCGACCTTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr18:79420644|79420848 hsa-miR-31-5p 0 0 1
chr18:79420644|79420848 hsa-miR-31-3p 0 0 1
chr18:79420644|79420848 hsa-miR-107 0 1 1
chr18:79420644|79420848 hsa-miR-604 1 0 1
chr18:79420644|79420848 hsa-miR-639 1 1 1
chr18:79420644|79420848 hsa-miR-647 0 0 1
chr18:79420644|79420848 hsa-miR-1292-5p 0 0 1
chr18:79420644|79420848 hsa-miR-1292-3p 0 0 1
chr18:79420644|79420848 hsa-miR-125a-3p 0 1 1
chr18:79420644|79420848 hsa-miR-103 0 0 1
chr18:79420644|79420848 hsa-miR-638 1 0 0
chr18:79420644|79420848 hsa-miR-658 1 1 0
chr18:79420644|79420848 hsa-miR-765 1 1 0
chr18:79420644|79420848 hsa-miR-936 1 0 0
chr18:79420644|79420848 hsa-miR-1275 1 0 0
chr18:79420644|79420848 hsa-miR-3125 1 1 0
chr18:79420644|79420848 hsa-miR-3132 1 0 0
chr18:79420644|79420848 hsa-miR-4270 1 1 0
chr18:79420644|79420848 hsa-miR-4271 1 0 0
chr18:79420644|79420848 hsa-miR-3916 1 1 0
chr18:79420644|79420848 hsa-miR-3937 1 1 0
chr18:79420644|79420848 hsa-miR-4476 1 0 0
chr18:79420644|79420848 hsa-miR-4510 1 0 0
chr18:79420644|79420848 hsa-miR-4514 1 0 0
chr18:79420644|79420848 hsa-miR-4692 1 1 0
chr18:79420644|79420848 hsa-miR-4706 0 1 0
chr18:79420644|79420848 hsa-miR-4721 1 0 0
chr18:79420644|79420848 hsa-miR-4739 1 1 0
chr18:79420644|79420848 hsa-miR-5090 1 0 0
chr18:79420644|79420848 hsa-miR-5192 1 0 0
chr18:79420644|79420848 hsa-miR-5194 1 0 0
chr18:79420644|79420848 hsa-miR-5698 1 0 0
chr18:79420644|79420848 hsa-miR-5739 1 1 0
chr18:79420644|79420848 hsa-miR-5787 1 0 0
chr18:79420644|79420848 hsa-miR-6077 0 1 0
chr18:79420644|79420848 hsa-miR-6088 1 0 0
chr18:79420644|79420848 hsa-miR-6127 1 0 0
chr18:79420644|79420848 hsa-miR-6133 1 0 0
chr18:79420644|79420848 hsa-miR-8072 1 0 0
chr18:79420644|79420848 hsa-miR-8085 1 1 0
chr18:79420644|79420848 hsa-miR-12118 1 0 0
chr18:79420644|79420848 hsa-miR-6734-5p 1 0 0
chr18:79420644|79420848 hsa-miR-7106-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6825-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6894-5p 1 0 0
chr18:79420644|79420848 hsa-miR-4687-3p 1 0 0
chr18:79420644|79420848 hsa-miR-6510-5p 1 0 0
chr18:79420644|79420848 hsa-miR-3192-5p 1 0 0
chr18:79420644|79420848 hsa-miR-7847-3p 1 0 0
chr18:79420644|79420848 hsa-miR-4695-5p 1 0 0
chr18:79420644|79420848 hsa-miR-4709-3p 1 1 0
chr18:79420644|79420848 hsa-miR-4722-5p 1 0 0
chr18:79420644|79420848 hsa-miR-7154-3p 0 1 0
chr18:79420644|79420848 hsa-miR-6727-5p 1 0 0
chr18:79420644|79420848 hsa-miR-197-5p 1 0 0
chr18:79420644|79420848 hsa-miR-7845-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6783-5p 0 1 0
chr18:79420644|79420848 hsa-miR-3180-3p 1 0 0
chr18:79420644|79420848 hsa-miR-6732-5p 1 1 0
chr18:79420644|79420848 hsa-miR-6798-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6760-5p 1 1 0
chr18:79420644|79420848 hsa-miR-2467-3p 1 1 0
chr18:79420644|79420848 hsa-miR-6782-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6786-5p 1 0 0
chr18:79420644|79420848 hsa-miR-7109-5p 1 0 0
chr18:79420644|79420848 hsa-miR-185-5p 1 0 0
chr18:79420644|79420848 hsa-miR-885-3p 1 0 0
chr18:79420644|79420848 hsa-miR-92b-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6847-5p 0 1 0
chr18:79420644|79420848 hsa-miR-103a-3p 0 1 0
chr18:79420644|79420848 hsa-miR-6717-5p 1 1 0
chr18:79420644|79420848 hsa-miR-6824-5p 1 0 0
chr18:79420644|79420848 hsa-miR-3158-5p 1 1 0
chr18:79420644|79420848 hsa-miR-3678-3p 0 1 0
chr18:79420644|79420848 hsa-miR-423-5p 1 0 0
chr18:79420644|79420848 hsa-miR-3191-3p 1 0 0
chr18:79420644|79420848 hsa-miR-6832-5p 1 1 0
chr18:79420644|79420848 hsa-miR-10400-5p 1 0 0
chr18:79420644|79420848 hsa-miR-1207-5p 1 0 0
chr18:79420644|79420848 hsa-miR-4763-3p 1 0 0
chr18:79420644|79420848 hsa-miR-6787-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6870-5p 1 0 0
chr18:79420644|79420848 hsa-miR-1343-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6743-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6752-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6754-5p 1 0 0
chr18:79420644|79420848 hsa-miR-7107-5p 1 0 0
chr18:79420644|79420848 hsa-miR-7110-5p 1 0 0
chr18:79420644|79420848 hsa-miR-11181-3p 1 1 0
chr18:79420644|79420848 hsa-miR-1249-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6722-3p 1 0 0
chr18:79420644|79420848 hsa-miR-6797-5p 1 0 0
chr18:79420644|79420848 hsa-miR-7111-5p 1 0 0
chr18:79420644|79420848 hsa-miR-4728-5p 1 0 0
chr18:79420644|79420848 hsa-miR-5196-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6780b-5p 1 0 0
chr18:79420644|79420848 hsa-miR-1909-3p 1 0 0
chr18:79420644|79420848 hsa-miR-328-5p 1 0 0
chr18:79420644|79420848 hsa-miR-4632-5p 1 0 0
chr18:79420644|79420848 hsa-miR-4649-5p 1 0 0
chr18:79420644|79420848 hsa-miR-4725-3p 1 1 0
chr18:79420644|79420848 hsa-miR-4745-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6729-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6738-5p 1 0 0
chr18:79420644|79420848 hsa-miR-675-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6794-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6795-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6848-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6858-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6887-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6511b-5p 1 0 0
chr18:79420644|79420848 hsa-miR-30c-1-3p 1 0 0
chr18:79420644|79420848 hsa-miR-6758-5p 1 1 0
chr18:79420644|79420848 hsa-miR-6856-5p 1 1 0
chr18:79420644|79420848 hsa-miR-4665-5p 1 0 0
chr18:79420644|79420848 hsa-miR-3679-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6876-5p 1 0 0
chr18:79420644|79420848 hsa-miR-6859-5p 0 1 0
chr18:79420644|79420848 hsa-miR-370-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr18:79420644|79420848
ORF Type ORF1
Protein Length 68
Nucleotide Length 204
Protein Sequence LETHPPLPLCSDVTWKRVPLLPSATTSPGNASSSSSLQQRRLETRPPLPLCSHAAWKCDPLFLSAATL
Nucleotide Sequence CTGGAAACGCATCCGCCTCTTCCCCTCTGCAGCGACGTCACCTGGAAACGCGTTCCCCTCTTGCCCTCTGCAACGACATCGCCTGGAAACGCGTCCTCCTCTTCCTCTCTGCAGCAACGTCGCCTGGAAACACGTCCTCCTCTTCCTCTCTGCAGCCATGCTGCCTGGAAATGCGACCCCCTCTTCCTCTCTGCAGCGACCTTG
CircID chr18:79420644|79420848
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MQRHRLETRPPLPLCSNVAWKHVLLFLSAAMLPGNATPSSSLQRPC
Nucleotide Sequence CTGCAACGACATCGCCTGGAAACGCGTCCTCCTCTTCCTCTCTGCAGCAACGTCGCCTGGAAACACGTCCTCCTCTTCCTCTCTGCAGCCATGCTGCCTGGAAATGCGACCCCCTCTTCCTCTCTGCAGCGACCTTGC
CircID chr18:79420644|79420848
ORF Type ORF3
Protein Length 59
Nucleotide Length 177
Protein Sequence MQRRHLETRSPLALCNDIAWKRVLLFLSAATSPGNTSSSSSLQPCCLEMRPPLPLCSDL
Nucleotide Sequence CTGCAGCGACGTCACCTGGAAACGCGTTCCCCTCTTGCCCTCTGCAACGACATCGCCTGGAAACGCGTCCTCCTCTTCCTCTCTGCAGCAACGTCGCCTGGAAACACGTCCTCCTCTTCCTCTCTGCAGCCATGCTGCCTGGAAATGCGACCCCCTCTTCCTCTCTGCAGCGACCTT
CircID chr18:79420644|79420848
ORF Type ORF4
Protein Length 52
Nucleotide Length 159
Protein Sequence MQRGRGGRISRQHGCREEEEDVFPGDVAAERKRRTRFQAMSLQRARGERVSR
Nucleotide Sequence CTGCAGAGAGGAAGAGGGGGTCGCATTTCCAGGCAGCATGGCTGCAGAGAGGAAGAGGAGGACGTGTTTCCAGGCGACGTTGCTGCAGAGAGGAAGAGGAGGACGCGTTTCCAGGCGATGTCGTTGCAGAGGGCAAGAGGGGAACGCGTTTCCAGGTGA
CircID chr18:79420644|79420848
ORF Type ORF5
Protein Length 53
Nucleotide Length 159
Protein Sequence MAAERKRRTCFQATLLQRGRGGRVSRRCRCRGQEGNAFPGDVAAEGKRRMRFQ
Nucleotide Sequence ATGGCTGCAGAGAGGAAGAGGAGGACGTGTTTCCAGGCGACGTTGCTGCAGAGAGGAAGAGGAGGACGCGTTTCCAGGCGATGTCGTTGCAGAGGGCAAGAGGGGAACGCGTTTCCAGGTGACGTCGCTGCAGAGGGGAAGAGGCGGATGCGTTTCCAG
CircID chr18:79420644|79420848
ORF Type ORF6
Protein Length 51
Nucleotide Length 153
Protein Sequence MQRGRGGRVSRRRCCREEEEDAFPGDVVAEGKRGTRFQVTSLQRGRGGCVS
Nucleotide Sequence CTGCAGAGAGGAAGAGGAGGACGTGTTTCCAGGCGACGTTGCTGCAGAGAGGAAGAGGAGGACGCGTTTCCAGGCGATGTCGTTGCAGAGGGCAAGAGGGGAACGCGTTTCCAGGTGACGTCGCTGCAGAGGGGAAGAGGCGGATGCGTTTCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab