CircRNA Information

General Information
circRNA Basic Information
CircID chr18:80045925|80046108
Strand +
CircType exon
Host Gene ENSG00000267127.5;
Algorism CIRI2;
Sequence CTCCTCTCTCTGCCTCCAACTCCTCTGTGTCCGGGGCATAGCATTCGTACTCCGGGGCACCAACCAGGTCCAGGTCATCTTCAACCTCCTCGCCTGACAGGTAACTCTTGAGGGAGCTGTCCTGCTCCAGGCGGGGCTTGGCCCTCTTCCTTCCCTTTTTCATCTGCGTTGTCAGCTCAGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr18:80045925|80046108 hsa-miR-335-5p 0 0 1
chr18:80045925|80046108 hsa-miR-335-3p 0 0 1
chr18:80045925|80046108 hsa-miR-492 0 0 1
chr18:80045925|80046108 hsa-miR-558 0 0 1
chr18:80045925|80046108 hsa-miR-571 0 0 1
chr18:80045925|80046108 hsa-miR-619-5p 0 0 1
chr18:80045925|80046108 hsa-miR-619-3p 0 0 1
chr18:80045925|80046108 hsa-miR-631 0 0 1
chr18:80045925|80046108 hsa-miR-650 0 0 1
chr18:80045925|80046108 hsa-miR-1286 0 0 1
chr18:80045925|80046108 hsa-miR-1252-5p 0 0 1
chr18:80045925|80046108 hsa-miR-1252-3p 0 0 1
chr18:80045925|80046108 hsa-miR-1827 0 0 1
chr18:80045925|80046108 hsa-miR-151-5p 0 0 1
chr18:80045925|80046108 hsa-miR-1254 0 0 1
chr18:80045925|80046108 hsa-miR-768-5p 0 0 1
chr18:80045925|80046108 hsa-miR-549 0 0 1
chr18:80045925|80046108 hsa-miR-612 1 0 0
chr18:80045925|80046108 hsa-miR-663a 1 0 0
chr18:80045925|80046108 hsa-miR-762 1 0 0
chr18:80045925|80046108 hsa-miR-765 1 0 0
chr18:80045925|80046108 hsa-miR-3125 1 0 0
chr18:80045925|80046108 hsa-miR-3154 1 0 0
chr18:80045925|80046108 hsa-miR-3166 1 0 0
chr18:80045925|80046108 hsa-miR-3185 1 0 0
chr18:80045925|80046108 hsa-miR-4303 1 0 0
chr18:80045925|80046108 hsa-miR-4254 0 1 0
chr18:80045925|80046108 hsa-miR-3661 0 1 0
chr18:80045925|80046108 hsa-miR-3665 1 0 0
chr18:80045925|80046108 hsa-miR-3907 1 0 0
chr18:80045925|80046108 hsa-miR-1268b 1 0 0
chr18:80045925|80046108 hsa-miR-4442 0 1 0
chr18:80045925|80046108 hsa-miR-4449 1 0 0
chr18:80045925|80046108 hsa-miR-4450 1 0 0
chr18:80045925|80046108 hsa-miR-4451 1 0 0
chr18:80045925|80046108 hsa-miR-4462 1 0 0
chr18:80045925|80046108 hsa-miR-4469 0 1 0
chr18:80045925|80046108 hsa-miR-4478 1 0 0
chr18:80045925|80046108 hsa-miR-4487 1 0 0
chr18:80045925|80046108 hsa-miR-4492 1 0 0
chr18:80045925|80046108 hsa-miR-4504 0 1 0
chr18:80045925|80046108 hsa-miR-4505 1 0 0
chr18:80045925|80046108 hsa-miR-4526 1 0 0
chr18:80045925|80046108 hsa-miR-4533 0 1 0
chr18:80045925|80046108 hsa-miR-4535 0 1 0
chr18:80045925|80046108 hsa-miR-1587 1 0 0
chr18:80045925|80046108 hsa-miR-4656 1 0 0
chr18:80045925|80046108 hsa-miR-4663 1 1 0
chr18:80045925|80046108 hsa-miR-4706 1 0 0
chr18:80045925|80046108 hsa-miR-4739 1 0 0
chr18:80045925|80046108 hsa-miR-4741 1 0 0
chr18:80045925|80046108 hsa-miR-5194 1 0 0
chr18:80045925|80046108 hsa-miR-5787 1 0 0
chr18:80045925|80046108 hsa-miR-6085 1 0 0
chr18:80045925|80046108 hsa-miR-6086 1 1 0
chr18:80045925|80046108 hsa-miR-6088 1 0 0
chr18:80045925|80046108 hsa-miR-6124 1 1 0
chr18:80045925|80046108 hsa-miR-8077 1 0 0
chr18:80045925|80046108 hsa-miR-4433b-3p 1 0 0
chr18:80045925|80046108 hsa-miR-92a-1-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6825-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6894-5p 1 0 0
chr18:80045925|80046108 hsa-miR-125a-3p 1 0 0
chr18:80045925|80046108 hsa-miR-6799-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6873-5p 0 1 0
chr18:80045925|80046108 hsa-miR-7847-3p 0 1 0
chr18:80045925|80046108 hsa-miR-4653-3p 1 0 0
chr18:80045925|80046108 hsa-miR-6842-3p 1 0 0
chr18:80045925|80046108 hsa-miR-4655-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6871-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6732-5p 1 0 0
chr18:80045925|80046108 hsa-miR-2467-3p 1 0 0
chr18:80045925|80046108 hsa-miR-6782-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6874-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6888-5p 1 0 0
chr18:80045925|80046108 hsa-miR-2277-3p 1 0 0
chr18:80045925|80046108 hsa-miR-877-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6847-5p 1 1 0
chr18:80045925|80046108 hsa-miR-7854-3p 1 0 0
chr18:80045925|80046108 hsa-miR-3160-3p 1 0 0
chr18:80045925|80046108 hsa-miR-3690 0 1 0
chr18:80045925|80046108 hsa-miR-149-3p 1 1 0
chr18:80045925|80046108 hsa-miR-6824-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6886-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6895-5p 0 1 0
chr18:80045925|80046108 hsa-miR-4707-5p 1 0 0
chr18:80045925|80046108 hsa-miR-7106-3p 0 1 0
chr18:80045925|80046108 hsa-miR-5000-3p 0 1 0
chr18:80045925|80046108 hsa-miR-744-5p 1 0 0
chr18:80045925|80046108 hsa-miR-4750-5p 1 1 0
chr18:80045925|80046108 hsa-miR-6767-5p 1 0 0
chr18:80045925|80046108 hsa-miR-371b-3p 1 0 0
chr18:80045925|80046108 hsa-miR-6812-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6816-5p 0 1 0
chr18:80045925|80046108 hsa-miR-6865-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6893-5p 1 0 0
chr18:80045925|80046108 hsa-miR-5001-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6726-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6743-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6754-5p 1 0 0
chr18:80045925|80046108 hsa-miR-11181-3p 1 0 0
chr18:80045925|80046108 hsa-miR-1249-5p 1 1 0
chr18:80045925|80046108 hsa-miR-6763-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6797-5p 1 1 0
chr18:80045925|80046108 hsa-miR-6808-5p 1 0 0
chr18:80045925|80046108 hsa-miR-3620-5p 1 0 0
chr18:80045925|80046108 hsa-miR-4728-5p 1 1 0
chr18:80045925|80046108 hsa-miR-5196-5p 1 1 0
chr18:80045925|80046108 hsa-miR-4649-5p 1 0 0
chr18:80045925|80046108 hsa-miR-4726-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6735-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6738-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6777-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6858-5p 1 0 0
chr18:80045925|80046108 hsa-miR-6889-5p 1 0 0
chr18:80045925|80046108 hsa-miR-939-5p 1 0 0
chr18:80045925|80046108 hsa-miR-1910-3p 0 1 0
chr18:80045925|80046108 hsa-miR-6511a-5p 0 1 0
chr18:80045925|80046108 hsa-miR-3085-5p 1 0 0
chr18:80045925|80046108 hsa-miR-10396a-3p 1 1 0
chr18:80045925|80046108 hsa-miR-10396b-3p 1 1 0
chr18:80045925|80046108 hsa-miR-3198 1 0 0
chr18:80045925|80046108 hsa-miR-3940-5p 1 0 0
chr18:80045925|80046108 hsa-miR-1199-5p 1 0 0
chr18:80045925|80046108 hsa-miR-7843-5p 1 0 0
chr18:80045925|80046108 hsa-miR-1914-3p 1 0 0
chr18:80045925|80046108 hsa-miR-3116 0 1 0
chr18:80045925|80046108 hsa-miR-4747-5p 0 1 0
chr18:80045925|80046108 hsa-miR-9851-5p 1 1 0
chr18:80045925|80046108 hsa-miR-10392-3p 1 0 0
chr18:80045925|80046108 hsa-miR-33b-3p 1 0 0
chr18:80045925|80046108 hsa-miR-6504-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr18:80045925|80046108
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MPPTPLCPGHSIRTPGHQPGPGHLQPPRLTGNS
Nucleotide Sequence CTGCCTCCAACTCCTCTGTGTCCGGGGCATAGCATTCGTACTCCGGGGCACCAACCAGGTCCAGGTCATCTTCAACCTCCTCGCCTGACAGGTAACTCTTGA
CircID chr18:80045925|80046108
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MRELSCSRRGLALFLPFFICVVSSA
Nucleotide Sequence TTGAGGGAGCTGTCCTGCTCCAGGCGGGGCTTGGCCCTCTTCCTTCCCTTTTTCATCTGCGTTGTCAGCTCAGCC
CircID chr18:80045925|80046108
ORF Type ORF3
Protein Length 58
Nucleotide Length 174
Protein Sequence MTTQMKKGRKRAKPRLEQDSSLKSYLSGEEVEDDLDLVGAPEYECYAPDTEELEAERG
Nucleotide Sequence CTGACAACGCAGATGAAAAAGGGAAGGAAGAGGGCCAAGCCCCGCCTGGAGCAGGACAGCTCCCTCAAGAGTTACCTGTCAGGCGAGGAGGTTGAAGATGACCTGGACCTGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAGTTGGAGGCAGAGAGAGGA
CircID chr18:80045925|80046108
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MKMTWTWLVPRSTNAMPRTQRSWRQREE
Nucleotide Sequence TTGAAGATGACCTGGACCTGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAGTTGGAGGCAGAGAGAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab