CircNet

General Information

circRNA Basic Information

CircID	chr18:9182382\|9221999
Strand	+
CircType	exon
Host Gene	ENSG00000101745.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATCCAGGATGAGAAGACTGATAAAAGAAGAAGCTAGCTGAACAGCTGTAAAATGCCCAAATCTGGGTTCACAAAACCAATTCAGAGTGAAAATTCTGACAGTGACAGCAATATGGTAGAGAAACCATATGGAAGAAAGAAACTACAGTAAAGGCTCTTGCTCACATTTCACCTTTCTTCTTTTACCTCTTGACCAACCACCCTGGTACTTCCCTGTGTGGTCTGGAGTGGCATGATGTGGCATGGCATGCTCCCCACCCCTTGGAACTCCTGGAGCACAGTGGCGAAGAACATGGCTCACTATAGCCTCAATCCTCCCAGCTCAAGCAGTCCTCCTGCCTCAGCCTCCCAAAGTAAAGACAAGATTGCATCCTACAGCAAAACTCCAAAAATTGAACGAAGTGATGTGAGCAAGGAGATGAAAGAGAAATCATCCATGAAACGTAAACTTCCTTTTACTATTAGCCCATCAAGAAATGAAGAACGAGATTCAGACACAGAATTGACAGGATAAATTTTATAGTTGTAACAGAGGTAAATCATGGCAGTGTTTACTGTTGAAGATTTTGGAATCTGACTAGTGTTGACCCTAAGCCCCCTACGAGCACTGGCCCAGTAATTAGACTTCTTTATTCAGATCCAGGACATACAAGTGAAAATTGGGGGGAGAGACTTATATCTTCTTACAGGACATACTCAGAGAAAGAAGGTCCAGAAAAGAAGAAGACAAAAAAGGAAGCTGGAAATAAGAAATCCACACCAGTTAGCATTCTTTTTGGTTATCCACTCTCTGAGCGAAAACAGATGGCACTTCTTATGCAGATGACAGCAAGAGACAACAGTCCAGATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAGTTCTTCATCTCGACAGAAAGATAAAGTTAATAAAAGAAATGAACGTGGTGAAACTCCTTTACACATGGCTGCTATTCGAGGAGATGTGAAACAAGTTAAAGAATTAATAAGTTTAGGGGCAAATGTGAATGTGAAAGATTTTGCAGGTTGGACACCACTGCATGAAGCTTGCAATGTTGGATATTACGATGTTGCTAAGATACTTATAGCAGCTGGAGCAGATGTTAACACACAAGGATTAGATGATGACACTCCACTCCATGATTCTGCTAGTAGTGGGCACAGAGATGTAAATTACTGGAATATGGAGATAAGTATCAGGGACAACTGTTCTTCACCAGCAGACTTGGAAACCTAGTTGATCTTTTAAAATCATAGTAAAGCTGTTACTTCGTCACGGTGGAAATCCATTTCAAGCTAATAAACATGGGGAGCGTCCAGTGGATGTAGCAGAAACAGAGGAGTTGGAGTTGCTACTAAAAAGAGAGGTGCCTTTATCTGATGATGATGAAAGTTACACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr18:9182382\|9221999	hsa-miR-320a-5p	0	0	1
chr18:9182382\|9221999	hsa-miR-320a-3p	0	0	1
chr18:9182382\|9221999	hsa-miR-379-5p	0	0	1
chr18:9182382\|9221999	hsa-miR-379-3p	0	0	1
chr18:9182382\|9221999	hsa-miR-498-5p	0	0	1
chr18:9182382\|9221999	hsa-miR-498-3p	0	0	1
chr18:9182382\|9221999	hsa-miR-571	0	0	1
chr18:9182382\|9221999	hsa-miR-665	0	0	1
chr18:9182382\|9221999	hsa-miR-939-5p	0	0	1
chr18:9182382\|9221999	hsa-miR-939-3p	0	0	1
chr18:9182382\|9221999	hsa-miR-1253	0	0	1
chr18:9182382\|9221999	hsa-miR-1255a	0	0	1
chr18:9182382\|9221999	hsa-miR-1272	0	1	1
chr18:9182382\|9221999	hsa-miR-513b-5p	0	0	1
chr18:9182382\|9221999	hsa-miR-513b-3p	0	0	1
chr18:9182382\|9221999	hsa-miR-1825	0	0	1
chr18:9182382\|9221999	hsa-miR-146a-3p	0	1	1
chr18:9182382\|9221999	hsa-miR-143-3p	0	1	1
chr18:9182382\|9221999	hsa-miR-199a-5p	0	0	1
chr18:9182382\|9221999	hsa-miR-199b-5p	0	0	1
chr18:9182382\|9221999	hsa-miR-320b	0	0	1
chr18:9182382\|9221999	hsa-miR-320c	0	0	1
chr18:9182382\|9221999	hsa-miR-320d	0	0	1
chr18:9182382\|9221999	hsa-miR-542-3p	0	0	1
chr18:9182382\|9221999	hsa-miR-1255b	0	0	1
chr18:9182382\|9221999	hsa-miR-7	0	0	1
chr18:9182382\|9221999	hsa-miR-1300	0	0	1
chr18:9182382\|9221999	hsa-miR-365	0	0	1
chr18:9182382\|9221999	hsa-miR-638	1	0	0
chr18:9182382\|9221999	hsa-miR-759	0	1	0
chr18:9182382\|9221999	hsa-miR-298	1	1	0
chr18:9182382\|9221999	hsa-miR-3125	0	1	0
chr18:9182382\|9221999	hsa-miR-3131	1	0	0
chr18:9182382\|9221999	hsa-miR-3185	0	1	0
chr18:9182382\|9221999	hsa-miR-3660	0	1	0
chr18:9182382\|9221999	hsa-miR-3908	0	1	0
chr18:9182382\|9221999	hsa-miR-3929	0	1	0
chr18:9182382\|9221999	hsa-miR-4450	1	0	0
chr18:9182382\|9221999	hsa-miR-4499	0	1	0
chr18:9182382\|9221999	hsa-miR-4502	1	1	0
chr18:9182382\|9221999	hsa-miR-4513	1	0	0
chr18:9182382\|9221999	hsa-miR-4689	1	1	0
chr18:9182382\|9221999	hsa-miR-4739	1	0	0
chr18:9182382\|9221999	hsa-miR-5698	1	0	0
chr18:9182382\|9221999	hsa-miR-8085	1	0	0
chr18:9182382\|9221999	hsa-miR-6825-5p	1	0	0
chr18:9182382\|9221999	hsa-miR-5187-5p	1	0	0
chr18:9182382\|9221999	hsa-miR-4653-3p	1	0	0
chr18:9182382\|9221999	hsa-miR-6730-5p	0	1	0
chr18:9182382\|9221999	hsa-miR-197-5p	1	1	0
chr18:9182382\|9221999	hsa-miR-6871-5p	1	0	0
chr18:9182382\|9221999	hsa-miR-6772-5p	1	0	0
chr18:9182382\|9221999	hsa-miR-6782-5p	1	0	0
chr18:9182382\|9221999	hsa-miR-6786-5p	1	0	0
chr18:9182382\|9221999	hsa-miR-3691-5p	0	1	0
chr18:9182382\|9221999	hsa-miR-6847-5p	1	1	0
chr18:9182382\|9221999	hsa-miR-6878-5p	1	1	0
chr18:9182382\|9221999	hsa-miR-3120-3p	0	1	0
chr18:9182382\|9221999	hsa-miR-3681-5p	0	1	0
chr18:9182382\|9221999	hsa-miR-4762-5p	0	1	0
chr18:9182382\|9221999	hsa-miR-1343-5p	1	1	0
chr18:9182382\|9221999	hsa-miR-6763-5p	1	1	0
chr18:9182382\|9221999	hsa-miR-6788-5p	0	1	0
chr18:9182382\|9221999	hsa-miR-328-5p	1	0	0
chr18:9182382\|9221999	hsa-miR-6858-5p	1	0	0
chr18:9182382\|9221999	hsa-miR-5586-3p	0	1	0
chr18:9182382\|9221999	hsa-miR-3085-5p	1	0	0
chr18:9182382\|9221999	hsa-miR-6856-5p	1	1	0
chr18:9182382\|9221999	hsa-miR-6855-5p	1	0	0
chr18:9182382\|9221999	hsa-miR-342-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr18:9182382\|9221999
ORF Type	ORF1
Protein Length	48
Nucleotide Length	144
Protein Sequence	LCLSSIWFLYHIAVTVRIFTLNWFCEPRFGHFTAVQLASSFISLLILD
Nucleotide Sequence	CTGTGTCTTTCTTCCATATGGTTTCTCTACCATATTGCTGTCACTGTCAGAATTTTCACTCTGAATTGGTTTTGTGAACCCAGATTTGGGCATTTTACAGCTGTTCAGCTAGCTTCTTCTTTTATCAGTCTTCTCATCCTGGAT

CircID	chr18:9182382\|9221999
ORF Type	ORF2
Protein Length	36
Nucleotide Length	108
Protein Sequence	MNSCKMPKSGFTKPIQSENSDSDSNMVEKPYGRKTQ
Nucleotide Sequence	CTGAACAGCTGTAAAATGCCCAAATCTGGGTTCACAAAACCAATTCAGAGTGAAAATTCTGACAGTGACAGCAATATGGTAGAGAAACCATATGGAAGAAAGACACAG

CircID	chr18:9182382\|9221999
ORF Type	ORF1
Protein Length	34
Nucleotide Length	105
Protein Sequence	LCNFHHHQIKAPLFLVATPTPLFLLHPLDAPHVY
Nucleotide Sequence	CTGTGTAACTTTCATCATCATCAGATAAAGGCACCTCTCTTTTTAGTAGCAACTCCAACTCCTCTGTTTCTGCTACATCCACTGGACGCTCCCCATGTTTATTAG

CircID	chr18:9182382\|9221999
ORF Type	ORF2
Protein Length	35
Nucleotide Length	108
Protein Sequence	MDFHRDEVTALLSFFHMVSLPYCCHCQNFHSELVL
Nucleotide Sequence	ATGGATTTCCACCGTGACGAAGTAACAGCTTTACTATCTTTCTTCCATATGGTTTCTCTACCATATTGCTGTCACTGTCAGAATTTTCACTCTGAATTGGTTTTGTGA

CircID	chr18:9182382\|9221999
ORF Type	ORF3
Protein Length	28
Nucleotide Length	84
Protein Sequence	MNWFCEPRFGHFTAVQLASSFISLLILD
Nucleotide Sequence	CTGAATTGGTTTTGTGAACCCAGATTTGGGCATTTTACAGCTGTTCAGCTAGCTTCTTCTTTTATCAGTCTTCTCATCCTGGAT

CircID	chr18:9182382\|9221999
ORF Type	ORF4
Protein Length	83
Nucleotide Length	249
Protein Sequence	MNSCKMPKSGFTKPIQSENSDSDSNMVEKPYGRKIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLKREVPLSDDDESYT
Nucleotide Sequence	CTGAACAGCTGTAAAATGCCCAAATCTGGGTTCACAAAACCAATTCAGAGTGAAAATTCTGACAGTGACAGCAATATGGTAGAGAAACCATATGGAAGAAAGATAGTAAAGCTGTTACTTCGTCACGGTGGAAATCCATTTCAAGCTAATAAACATGGGGAGCGTCCAGTGGATGTAGCAGAAACAGAGGAGTTGGAGTTGCTACTAAAAAGAGAGGTGCCTTTATCTGATGATGATGAAAGTTACACA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr18:9182382\|9221999	NOP56	1	1	0
chr18:9182382\|9221999	MOV10	0	0	1
chr18:9182382\|9221999	ELAVL1	0	4	1
chr18:9182382\|9221999	SF3B4	3	0	5
chr18:9182382\|9221999	FAM120A	1	0	2
chr18:9182382\|9221999	PRPF8	0	2	10
chr18:9182382\|9221999	UPF1	0	2	0
chr18:9182382\|9221999	DDX54	2	2	33
chr18:9182382\|9221999	TAF15	1	0	0
chr18:9182382\|9221999	CAPRIN1	0	0	1
chr18:9182382\|9221999	FMR1	2	0	2
chr18:9182382\|9221999	CPSF6	2	0	3
chr18:9182382\|9221999	NUDT21	0	2	4
chr18:9182382\|9221999	GPKOW	0	1	2
chr18:9182382\|9221999	FUS	1	3	0
chr18:9182382\|9221999	GNL3	0	1	0
chr18:9182382\|9221999	SRSF7	1	0	2
chr18:9182382\|9221999	MTPAP	0	0	3
chr18:9182382\|9221999	SRSF1	3	0	10
chr18:9182382\|9221999	NOP58	3	1	14
chr18:9182382\|9221999	U2AF1	3	1	5
chr18:9182382\|9221999	U2AF2	9	8	18
chr18:9182382\|9221999	SRSF9	2	0	0
chr18:9182382\|9221999	ZNF622	2	1	7
chr18:9182382\|9221999	IGF2BP1	0	0	12
chr18:9182382\|9221999	GRWD1	1	0	6
chr18:9182382\|9221999	RBM10	1	0	0
chr18:9182382\|9221999	HNRNPL	0	1	0
chr18:9182382\|9221999	SF3A3	1	0	1
chr18:9182382\|9221999	FIP1L1	0	0	3
chr18:9182382\|9221999	PTBP1	1	3	1
chr18:9182382\|9221999	HNRNPC	5	0	2
chr18:9182382\|9221999	TRA2A	5	0	12
chr18:9182382\|9221999	KHSRP	0	9	0
chr18:9182382\|9221999	ZNF184	1	0	0
chr18:9182382\|9221999	HNRNPA1	3	0	0
chr18:9182382\|9221999	SMNDC1	2	0	1
chr18:9182382\|9221999	MSI2	0	0	1
chr18:9182382\|9221999	ACIN1	0	0	8
chr18:9182382\|9221999	LIN28B	2	2	8
chr18:9182382\|9221999	LIN28A	0	0	1
chr18:9182382\|9221999	QKI	0	1	0
chr18:9182382\|9221999	FXR2	1	0	0
chr18:9182382\|9221999	UCHL5	0	2	5
chr18:9182382\|9221999	FASTKD2	0	0	1
chr18:9182382\|9221999	IGF2BP3	0	0	3
chr18:9182382\|9221999	IGF2BP2	1	2	27
chr18:9182382\|9221999	TARDBP	0	3	5
chr18:9182382\|9221999	BUD13	3	1	19
chr18:9182382\|9221999	RBFOX2	1	0	0
chr18:9182382\|9221999	RBM47	0	1	6
chr18:9182382\|9221999	EIF4G2	1	0	4
chr18:9182382\|9221999	DDX24	0	0	1
chr18:9182382\|9221999	CSTF2T	1	1	7
chr18:9182382\|9221999	BCCIP	1	0	0
chr18:9182382\|9221999	CSTF2	0	4	0
chr18:9182382\|9221999	CPSF7	1	1	6
chr18:9182382\|9221999	RBM22	0	2	0
chr18:9182382\|9221999	WDR33	0	1	0
chr18:9182382\|9221999	PPIG	1	0	1
chr18:9182382\|9221999	AGO2	0	0	4
chr18:9182382\|9221999	AGO1	0	0	1
chr18:9182382\|9221999	EWSR1	0	0	1
chr18:9182382\|9221999	EIF4A3	6	2	15
chr18:9182382\|9221999	FBL	1	0	7

CircRNA Information