CircRNA Information

General Information
circRNA Basic Information
CircID chr18:9950079|9950238
Strand -
CircType exon
Host Gene ENSG00000101558.12;
Algorism CIRI2;
Sequence CAAAGTGCTGGTTTTAGGGGTAAATACAAAGAGAGATGGCTCTTGCTCTCTCAGCCTTTGAAGTATTACAGGAAAGAACTTGAACAATAATTATTAAGATACATAATAAAGTGCTATGGTAGAGGTACGTGCCAGGGATTATGGGAATAGAGGGAGTGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr18:9950079|9950238 hsa-miR-26b-5p 0 0 1
chr18:9950079|9950238 hsa-miR-26b-3p 0 0 1
chr18:9950079|9950238 hsa-miR-200b-5p 0 0 1
chr18:9950079|9950238 hsa-miR-200b-3p 0 0 1
chr18:9950079|9950238 hsa-miR-200c-5p 0 0 1
chr18:9950079|9950238 hsa-miR-200c-3p 0 0 1
chr18:9950079|9950238 hsa-miR-335-5p 0 0 1
chr18:9950079|9950238 hsa-miR-335-3p 0 0 1
chr18:9950079|9950238 hsa-miR-429 0 0 1
chr18:9950079|9950238 hsa-miR-564 0 0 1
chr18:9950079|9950238 hsa-miR-634 0 0 1
chr18:9950079|9950238 hsa-miR-944 0 0 1
chr18:9950079|9950238 hsa-miR-1297 0 0 1
chr18:9950079|9950238 hsa-miR-486-5p 0 0 1
chr18:9950079|9950238 hsa-miR-642 0 0 1
chr18:9950079|9950238 hsa-miR-26a 0 0 1
chr18:9950079|9950238 hsa-miR-4326 1 0 0
chr18:9950079|9950238 hsa-miR-3929 0 1 0
chr18:9950079|9950238 hsa-miR-4469 1 1 0
chr18:9950079|9950238 hsa-miR-4656 0 1 0
chr18:9950079|9950238 hsa-miR-6892-3p 1 0 0
chr18:9950079|9950238 hsa-miR-6881-3p 1 0 0
chr18:9950079|9950238 hsa-miR-7110-3p 1 0 0
chr18:9950079|9950238 hsa-miR-6882-3p 1 0 0
chr18:9950079|9950238 hsa-miR-7113-3p 1 0 0
chr18:9950079|9950238 hsa-miR-7111-3p 1 0 0
chr18:9950079|9950238 hsa-miR-4667-3p 1 0 0
chr18:9950079|9950238 hsa-miR-4742-3p 1 0 0
chr18:9950079|9950238 hsa-miR-7106-3p 1 0 0
chr18:9950079|9950238 hsa-miR-6867-3p 1 0 0
chr18:9950079|9950238 hsa-miR-6865-3p 1 0 0
chr18:9950079|9950238 hsa-miR-6826-3p 1 0 0
chr18:9950079|9950238 hsa-miR-6777-3p 1 0 0
chr18:9950079|9950238 hsa-miR-6761-5p 0 1 0
chr18:9950079|9950238 hsa-miR-204-5p 1 0 0
chr18:9950079|9950238 hsa-miR-5195-5p 0 1 0
chr18:9950079|9950238 hsa-miR-6731-3p 0 1 0
chr18:9950079|9950238 hsa-miR-320a-5p 1 0 0
chr18:9950079|9950238 hsa-miR-4685-3p 1 0 0
chr18:9950079|9950238 hsa-miR-324-3p 1 0 0
chr18:9950079|9950238 hsa-miR-6756-3p 1 0 0
chr18:9950079|9950238 hsa-miR-3059-5p 1 0 0
chr18:9950079|9950238 hsa-miR-483-3p 1 0 0
chr18:9950079|9950238 hsa-miR-5195-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr18:9950079|9950238
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MFKFFPVILQRLREQEPSLFVFTPKTSTL
Nucleotide Sequence TTGTTCAAGTTCTTTCCTGTAATACTTCAAAGGCTGAGAGAGCAAGAGCCATCTCTCTTTGTATTTACCCCTAAAACCAGCACTTTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites