CircRNA Information

General Information
circRNA Basic Information
CircID chr19:10107517|10107854
Strand +
CircType exon
Host Gene ENSG00000243207.5;
Algorism CIRI2;
Sequence CTTCTTGACCTGGAAGGTCAAGGTGGGGCCTCCTGGGAGGCGCATCAGCTTCTGCAGGAGAAGAAAAGATCAGTGACTCTGGAGGGGTCTAGCAGAGGTGCCCGGAGTAGGCACCTTTGCCCCATCTCTTCTTCAGAGCGTTTACTTTGAAGCCAGAAATCACAGCAGCTCAGAGGCATATGTGTTCATCATGAGAGATAGGGGAAGGGGGGGTCTGGGGGAGATGAAGGGTGAGGGCGTCTACTCACAAAGTAGACATTGGTCTCTGTTTTGCTCAGGATCAGAAAGTGTGTGACCCCGAGGGGCCCAGCCACTGCCACGCAGTCCTTCAGCGAGTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:10107517|10107854 hsa-miR-18a-5p 0 0 1
chr19:10107517|10107854 hsa-miR-18a-3p 0 0 1
chr19:10107517|10107854 hsa-miR-192-5p 0 0 1
chr19:10107517|10107854 hsa-miR-192-3p 0 0 1
chr19:10107517|10107854 hsa-miR-34a-5p 0 0 1
chr19:10107517|10107854 hsa-miR-34a-3p 0 0 1
chr19:10107517|10107854 hsa-miR-205-5p 0 0 1
chr19:10107517|10107854 hsa-miR-205-3p 0 0 1
chr19:10107517|10107854 hsa-miR-215-5p 0 0 1
chr19:10107517|10107854 hsa-miR-215-3p 0 0 1
chr19:10107517|10107854 hsa-miR-149-5p 0 0 1
chr19:10107517|10107854 hsa-miR-149-3p 0 0 1
chr19:10107517|10107854 hsa-miR-377-5p 0 0 1
chr19:10107517|10107854 hsa-miR-377-3p 0 0 1
chr19:10107517|10107854 hsa-miR-18b-5p 0 0 1
chr19:10107517|10107854 hsa-miR-18b-3p 0 0 1
chr19:10107517|10107854 hsa-miR-449a 0 0 1
chr19:10107517|10107854 hsa-miR-433-5p 0 0 1
chr19:10107517|10107854 hsa-miR-433-3p 0 0 1
chr19:10107517|10107854 hsa-miR-520g-5p 0 0 1
chr19:10107517|10107854 hsa-miR-520g-3p 0 0 1
chr19:10107517|10107854 hsa-miR-520h 0 0 1
chr19:10107517|10107854 hsa-miR-558 0 1 1
chr19:10107517|10107854 hsa-miR-559 0 0 1
chr19:10107517|10107854 hsa-miR-603 0 0 1
chr19:10107517|10107854 hsa-miR-449b-5p 0 0 1
chr19:10107517|10107854 hsa-miR-449b-3p 0 0 1
chr19:10107517|10107854 hsa-miR-411-5p 0 0 1
chr19:10107517|10107854 hsa-miR-411-3p 0 0 1
chr19:10107517|10107854 hsa-miR-758-5p 0 0 1
chr19:10107517|10107854 hsa-miR-758-3p 0 0 1
chr19:10107517|10107854 hsa-miR-298 1 1 1
chr19:10107517|10107854 hsa-miR-665 0 1 1
chr19:10107517|10107854 hsa-miR-934 0 1 1
chr19:10107517|10107854 hsa-miR-942-5p 0 0 1
chr19:10107517|10107854 hsa-miR-942-3p 0 0 1
chr19:10107517|10107854 hsa-miR-1200 0 1 1
chr19:10107517|10107854 hsa-miR-548j-5p 0 0 1
chr19:10107517|10107854 hsa-miR-548j-3p 0 0 1
chr19:10107517|10107854 hsa-miR-1272 0 1 1
chr19:10107517|10107854 hsa-miR-548p 0 0 1
chr19:10107517|10107854 hsa-miR-1281 0 0 1
chr19:10107517|10107854 hsa-miR-1288-5p 0 0 1
chr19:10107517|10107854 hsa-miR-1288-3p 0 0 1
chr19:10107517|10107854 hsa-miR-1252-5p 0 0 1
chr19:10107517|10107854 hsa-miR-1252-3p 0 0 1
chr19:10107517|10107854 hsa-miR-296-5p 1 0 1
chr19:10107517|10107854 hsa-miR-486-3p 0 0 1
chr19:10107517|10107854 hsa-miR-525-5p 0 1 1
chr19:10107517|10107854 hsa-miR-361-3p 0 0 1
chr19:10107517|10107854 hsa-miR-1224-3p 0 0 1
chr19:10107517|10107854 hsa-miR-532-5p 0 0 1
chr19:10107517|10107854 hsa-miR-520a-5p 0 0 1
chr19:10107517|10107854 hsa-miR-34c-5p 0 0 1
chr19:10107517|10107854 hsa-miR-548b-5p 0 0 1
chr19:10107517|10107854 hsa-miR-548d-5p 0 0 1
chr19:10107517|10107854 hsa-miR-548c-5p 0 0 1
chr19:10107517|10107854 hsa-miR-548a-5p 0 0 1
chr19:10107517|10107854 hsa-miR-548i 0 0 1
chr19:10107517|10107854 hsa-miR-720 0 0 1
chr19:10107517|10107854 hsa-miR-548h 0 0 1
chr19:10107517|10107854 hsa-miR-346 1 0 0
chr19:10107517|10107854 hsa-miR-663a 1 0 0
chr19:10107517|10107854 hsa-miR-762 1 0 0
chr19:10107517|10107854 hsa-miR-3131 1 0 0
chr19:10107517|10107854 hsa-miR-3169 0 1 0
chr19:10107517|10107854 hsa-miR-4303 0 1 0
chr19:10107517|10107854 hsa-miR-4324 1 0 0
chr19:10107517|10107854 hsa-miR-4268 1 0 0
chr19:10107517|10107854 hsa-miR-4279 1 0 0
chr19:10107517|10107854 hsa-miR-3915 0 1 0
chr19:10107517|10107854 hsa-miR-4420 0 1 0
chr19:10107517|10107854 hsa-miR-3135b 1 0 0
chr19:10107517|10107854 hsa-miR-4469 1 0 0
chr19:10107517|10107854 hsa-miR-4686 0 1 0
chr19:10107517|10107854 hsa-miR-5787 1 1 0
chr19:10107517|10107854 hsa-miR-6127 1 0 0
chr19:10107517|10107854 hsa-miR-8064 1 0 0
chr19:10107517|10107854 hsa-miR-6749-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6747-3p 1 0 0
chr19:10107517|10107854 hsa-miR-766-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6892-3p 1 0 0
chr19:10107517|10107854 hsa-miR-210-5p 1 0 0
chr19:10107517|10107854 hsa-miR-4709-3p 0 1 0
chr19:10107517|10107854 hsa-miR-4722-5p 1 0 0
chr19:10107517|10107854 hsa-miR-7160-5p 1 0 0
chr19:10107517|10107854 hsa-miR-874-5p 1 0 0
chr19:10107517|10107854 hsa-miR-6840-5p 1 0 0
chr19:10107517|10107854 hsa-miR-6842-3p 0 1 0
chr19:10107517|10107854 hsa-miR-7110-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6726-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6845-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6793-5p 1 0 0
chr19:10107517|10107854 hsa-miR-6829-5p 1 0 0
chr19:10107517|10107854 hsa-miR-6728-3p 0 1 0
chr19:10107517|10107854 hsa-miR-6821-5p 1 1 0
chr19:10107517|10107854 hsa-miR-4713-5p 1 0 0
chr19:10107517|10107854 hsa-miR-532-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6884-3p 1 1 0
chr19:10107517|10107854 hsa-miR-6803-3p 1 1 0
chr19:10107517|10107854 hsa-miR-7161-3p 1 0 0
chr19:10107517|10107854 hsa-miR-7113-3p 1 0 0
chr19:10107517|10107854 hsa-miR-3679-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6821-3p 1 0 0
chr19:10107517|10107854 hsa-miR-4640-3p 1 0 0
chr19:10107517|10107854 hsa-miR-1306-5p 1 0 0
chr19:10107517|10107854 hsa-miR-3158-5p 0 1 0
chr19:10107517|10107854 hsa-miR-6870-3p 1 1 0
chr19:10107517|10107854 hsa-miR-6869-5p 0 1 0
chr19:10107517|10107854 hsa-miR-7152-3p 1 0 0
chr19:10107517|10107854 hsa-miR-1236-3p 1 1 0
chr19:10107517|10107854 hsa-miR-6785-3p 1 0 0
chr19:10107517|10107854 hsa-miR-5571-3p 0 1 0
chr19:10107517|10107854 hsa-miR-4732-3p 1 0 0
chr19:10107517|10107854 hsa-miR-4758-3p 0 1 0
chr19:10107517|10107854 hsa-miR-4778-3p 0 1 0
chr19:10107517|10107854 hsa-miR-6867-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6887-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6778-3p 0 1 0
chr19:10107517|10107854 hsa-miR-2355-5p 1 0 0
chr19:10107517|10107854 hsa-miR-6865-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6886-3p 1 1 0
chr19:10107517|10107854 hsa-miR-5088-3p 1 0 0
chr19:10107517|10107854 hsa-miR-4749-3p 1 1 0
chr19:10107517|10107854 hsa-miR-6795-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6859-3p 1 1 0
chr19:10107517|10107854 hsa-miR-6794-3p 1 0 0
chr19:10107517|10107854 hsa-miR-668-5p 1 0 0
chr19:10107517|10107854 hsa-miR-6880-3p 1 0 0
chr19:10107517|10107854 hsa-miR-3620-3p 1 0 0
chr19:10107517|10107854 hsa-miR-1229-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6798-3p 1 1 0
chr19:10107517|10107854 hsa-miR-6734-3p 0 1 0
chr19:10107517|10107854 hsa-miR-6515-3p 1 1 0
chr19:10107517|10107854 hsa-miR-6846-3p 1 1 0
chr19:10107517|10107854 hsa-miR-1249-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6729-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6789-3p 1 0 0
chr19:10107517|10107854 hsa-miR-455-5p 0 1 0
chr19:10107517|10107854 hsa-miR-6800-3p 1 0 0
chr19:10107517|10107854 hsa-miR-3162-3p 1 0 0
chr19:10107517|10107854 hsa-miR-4787-3p 1 1 0
chr19:10107517|10107854 hsa-miR-3156-3p 1 0 0
chr19:10107517|10107854 hsa-miR-4763-3p 1 0 0
chr19:10107517|10107854 hsa-miR-3127-3p 1 0 0
chr19:10107517|10107854 hsa-miR-4685-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6754-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6836-5p 1 0 0
chr19:10107517|10107854 hsa-miR-4632-5p 1 0 0
chr19:10107517|10107854 hsa-miR-1285-3p 0 1 0
chr19:10107517|10107854 hsa-miR-6773-5p 1 0 0
chr19:10107517|10107854 hsa-miR-6724-5p 1 0 0
chr19:10107517|10107854 hsa-miR-6791-5p 1 0 0
chr19:10107517|10107854 hsa-miR-6756-3p 0 1 0
chr19:10107517|10107854 hsa-miR-6784-3p 1 1 0
chr19:10107517|10107854 hsa-miR-6792-3p 1 1 0
chr19:10107517|10107854 hsa-miR-6862-3p 1 1 0
chr19:10107517|10107854 hsa-miR-10401-3p 1 0 0
chr19:10107517|10107854 hsa-miR-125a-5p 1 0 0
chr19:10107517|10107854 hsa-miR-6511b-3p 1 0 0
chr19:10107517|10107854 hsa-miR-6891-3p 1 0 0
chr19:10107517|10107854 hsa-miR-7114-3p 1 0 0
chr19:10107517|10107854 hsa-miR-5581-5p 0 1 0
chr19:10107517|10107854 hsa-miR-330-5p 0 1 0
chr19:10107517|10107854 hsa-miR-6744-3p 1 0 0
chr19:10107517|10107854 hsa-miR-10394-5p 0 1 0
chr19:10107517|10107854 hsa-miR-4691-5p 1 1 0
chr19:10107517|10107854 hsa-miR-10397-5p 0 1 0
chr19:10107517|10107854 hsa-miR-412-3p 1 0 0
chr19:10107517|10107854 hsa-miR-125b-5p 1 0 0
chr19:10107517|10107854 hsa-miR-664a-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:10107517|10107854
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence MEGQGGASWEAHQLLQEKKRSVTLEGSSRGARSRHLCPISSSERLL
Nucleotide Sequence CTGGAAGGTCAAGGTGGGGCCTCCTGGGAGGCGCATCAGCTTCTGCAGGAGAAGAAAAGATCAGTGACTCTGGAGGGGTCTAGCAGAGGTGCCCGGAGTAGGCACCTTTGCCCCATCTCTTCTTCAGAGCGTTTACTTTGA

CircID chr19:10107517|10107854
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MVSVLLRIRKCVTPRGPATATQSFSE
Nucleotide Sequence TTGGTCTCTGTTTTGCTCAGGATCAGAAAGTGTGTGACCCCGAGGGGCCCAGCCACTGCCACGCAGTCCTTCAGCGAG

CircID chr19:10107517|10107854
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MRDRGRGGLGEMKGEGVYSQSRHWSLFCSGSESV
Nucleotide Sequence ATGAGAGATAGGGGAAGGGGGGGTCTGGGGGAGATGAAGGGTGAGGGCGTCTACTCACAAAGTAGACATTGGTCTCTGTTTTGCTCAGGATCAGAAAGTGTGTGA

CircID chr19:10107517|10107854
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MPHLFFRAFTLKPEITAAQRHMCSS
Nucleotide Sequence TTGCCCCATCTCTTCTTCAGAGCGTTTACTTTGAAGCCAGAAATCACAGCAGCTCAGAGGCATATGTGTTCATCATGA

CircID chr19:10107517|10107854
ORF Type ORF5
Protein Length 47
Nucleotide Length 144
Protein Sequence MKDCVAVAGPLGVTHFLILSKTETNVYFVSRRPHPSSPPDPPFPYLS
Nucleotide Sequence CTGAAGGACTGCGTGGCAGTGGCTGGGCCCCTCGGGGTCACACACTTTCTGATCCTGAGCAAAACAGAGACCAATGTCTACTTTGTGAGTAGACGCCCTCACCCTTCATCTCCCCCAGACCCCCCCTTCCCCTATCTCTCATGA

CircID chr19:10107517|10107854
ORF Type ORF6
Protein Length 44
Nucleotide Length 135
Protein Sequence MPLSCCDFWLQSKRSEEEMGQRCLLRAPLLDPSRVTDLFFSCRS
Nucleotide Sequence ATGCCTCTGAGCTGCTGTGATTTCTGGCTTCAAAGTAAACGCTCTGAAGAAGAGATGGGGCAAAGGTGCCTACTCCGGGCACCTCTGCTAGACCCCTCCAGAGTCACTGATCTTTTCTTCTCCTGCAGAAGCTGA

CircID chr19:10107517|10107854
ORF Type ORF7
Protein Length 27
Nucleotide Length 84
Protein Sequence MRGSGWAPRGHTLSDPEQNRDQCLLCE
Nucleotide Sequence CTGCGTGGCAGTGGCTGGGCCCCTCGGGGTCACACACTTTCTGATCCTGAGCAAAACAGAGACCAATGTCTACTTTGTGAGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites