CircRNA Information

General Information
circRNA Basic Information
CircID chr19:10323224|10323449
Strand +
CircType exon
Host Gene ENSG00000161847.12;
Algorism CIRI2;
Sequence CTGCGAGTCTCCTTCTGCGCCCCTGGGCCCCCCGGCCGCAGTATGCTGGCCGCTCTCATCGCTGCCCAGGCCACGGTGAGCCTGTGCGGGCAGAGGTGGCGGGGTGGGGATGGGAGCCCCATGGGGATGTCAGGGCCCCAGCGGCACTCTGAGCTGCTTCTGTTCCTTCCTGCAGGCCCTCAATCGGGGGAAGGGACTCCTCCCCGAGCCCAACATCCTGCAGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:10323224|10323449 hsa-miR-484 0 1 1
chr19:10323224|10323449 hsa-miR-489-5p 0 0 1
chr19:10323224|10323449 hsa-miR-489-3p 0 0 1
chr19:10323224|10323449 hsa-miR-612 0 1 1
chr19:10323224|10323449 hsa-miR-646 0 0 1
chr19:10323224|10323449 hsa-miR-661 0 0 1
chr19:10323224|10323449 hsa-miR-765 0 0 1
chr19:10323224|10323449 hsa-miR-298 0 1 1
chr19:10323224|10323449 hsa-miR-1204 0 1 1
chr19:10323224|10323449 hsa-miR-1205 0 1 1
chr19:10323224|10323449 hsa-miR-1286 0 0 1
chr19:10323224|10323449 hsa-miR-1291 0 1 1
chr19:10323224|10323449 hsa-miR-1265 0 0 1
chr19:10323224|10323449 hsa-miR-1252-5p 0 0 1
chr19:10323224|10323449 hsa-miR-1252-3p 0 0 1
chr19:10323224|10323449 hsa-miR-542-5p 0 0 1
chr19:10323224|10323449 hsa-miR-885-3p 0 1 1
chr19:10323224|10323449 hsa-miR-1289 0 0 1
chr19:10323224|10323449 hsa-miR-338-3p 0 0 1
chr19:10323224|10323449 hsa-miR-324-3p 0 0 1
chr19:10323224|10323449 hsa-miR-1285 0 0 1
chr19:10323224|10323449 hsa-miR-371-3p 0 0 1
chr19:10323224|10323449 hsa-miR-1293 1 0 0
chr19:10323224|10323449 hsa-miR-2861 0 1 0
chr19:10323224|10323449 hsa-miR-3135a 1 0 0
chr19:10323224|10323449 hsa-miR-3147 0 1 0
chr19:10323224|10323449 hsa-miR-3155a 0 1 0
chr19:10323224|10323449 hsa-miR-1260b 0 1 0
chr19:10323224|10323449 hsa-miR-4258 0 1 0
chr19:10323224|10323449 hsa-miR-3918 1 1 0
chr19:10323224|10323449 hsa-miR-4449 1 0 0
chr19:10323224|10323449 hsa-miR-4476 0 1 0
chr19:10323224|10323449 hsa-miR-3155b 0 1 0
chr19:10323224|10323449 hsa-miR-4656 1 0 0
chr19:10323224|10323449 hsa-miR-4674 0 1 0
chr19:10323224|10323449 hsa-miR-4688 1 0 0
chr19:10323224|10323449 hsa-miR-4739 1 0 0
chr19:10323224|10323449 hsa-miR-4779 0 1 0
chr19:10323224|10323449 hsa-miR-6085 1 0 0
chr19:10323224|10323449 hsa-miR-6860 0 1 0
chr19:10323224|10323449 hsa-miR-9899 1 0 0
chr19:10323224|10323449 hsa-miR-12120 1 1 0
chr19:10323224|10323449 hsa-miR-4731-5p 0 1 0
chr19:10323224|10323449 hsa-miR-323a-5p 1 0 0
chr19:10323224|10323449 hsa-miR-6089 1 0 0
chr19:10323224|10323449 hsa-miR-6840-5p 1 1 0
chr19:10323224|10323449 hsa-miR-3180-3p 1 0 0
chr19:10323224|10323449 hsa-miR-3934-3p 1 0 0
chr19:10323224|10323449 hsa-miR-615-5p 1 0 0
chr19:10323224|10323449 hsa-miR-5088-5p 1 0 0
chr19:10323224|10323449 hsa-miR-1226-5p 1 1 0
chr19:10323224|10323449 hsa-miR-1909-5p 1 1 0
chr19:10323224|10323449 hsa-miR-4640-5p 1 0 0
chr19:10323224|10323449 hsa-miR-4743-5p 1 0 0
chr19:10323224|10323449 hsa-miR-6789-5p 1 0 0
chr19:10323224|10323449 hsa-miR-6870-3p 0 1 0
chr19:10323224|10323449 hsa-miR-423-5p 0 1 0
chr19:10323224|10323449 hsa-miR-6499-5p 1 0 0
chr19:10323224|10323449 hsa-miR-2114-5p 0 1 0
chr19:10323224|10323449 hsa-miR-4732-3p 0 1 0
chr19:10323224|10323449 hsa-miR-6719-3p 0 1 0
chr19:10323224|10323449 hsa-miR-1296-5p 1 0 0
chr19:10323224|10323449 hsa-miR-1199-3p 0 1 0
chr19:10323224|10323449 hsa-miR-3675-5p 0 1 0
chr19:10323224|10323449 hsa-miR-6729-3p 0 1 0
chr19:10323224|10323449 hsa-miR-3162-3p 0 1 0
chr19:10323224|10323449 hsa-miR-7107-5p 0 1 0
chr19:10323224|10323449 hsa-miR-1915-3p 1 0 0
chr19:10323224|10323449 hsa-miR-5189-5p 0 1 0
chr19:10323224|10323449 hsa-miR-1237-5p 1 0 0
chr19:10323224|10323449 hsa-miR-328-5p 1 1 0
chr19:10323224|10323449 hsa-miR-4632-5p 0 1 0
chr19:10323224|10323449 hsa-miR-4649-5p 1 0 0
chr19:10323224|10323449 hsa-miR-4726-5p 1 0 0
chr19:10323224|10323449 hsa-miR-6846-5p 1 0 0
chr19:10323224|10323449 hsa-miR-6848-5p 1 0 0
chr19:10323224|10323449 hsa-miR-6889-5p 0 1 0
chr19:10323224|10323449 hsa-miR-3187-5p 0 1 0
chr19:10323224|10323449 hsa-miR-4697-5p 1 0 0
chr19:10323224|10323449 hsa-miR-6885-5p 1 1 0
chr19:10323224|10323449 hsa-miR-1285-3p 0 1 0
chr19:10323224|10323449 hsa-miR-6773-5p 1 0 0
chr19:10323224|10323449 hsa-miR-1914-3p 1 0 0
chr19:10323224|10323449 hsa-miR-6876-5p 1 1 0
chr19:10323224|10323449 hsa-miR-10398-5p 0 1 0
chr19:10323224|10323449 hsa-miR-6727-3p 0 1 0
chr19:10323224|10323449 hsa-miR-6784-3p 0 1 0
chr19:10323224|10323449 hsa-miR-6862-3p 0 1 0
chr19:10323224|10323449 hsa-miR-10401-3p 0 1 0
chr19:10323224|10323449 hsa-miR-10400-3p 0 1 0
chr19:10323224|10323449 hsa-miR-6775-3p 0 1 0
chr19:10323224|10323449 hsa-miR-10394-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:10323224|10323449
ORF Type ORF1
Protein Length 75
Nucleotide Length 225
Protein Sequence LRVSFCAPGPPGRSMLAALIAAQATVSLCGQRWRGGDGSPMGMSGPQRHSELLLFLPAGPQSGEGTPPRAQHPAA
Nucleotide Sequence CTGCGAGTCTCCTTCTGCGCCCCTGGGCCCCCCGGCCGCAGTATGCTGGCCGCTCTCATCGCTGCCCAGGCCACGGTGAGCCTGTGCGGGCAGAGGTGGCGGGGTGGGGATGGGAGCCCCATGGGGATGTCAGGGCCCCAGCGGCACTCTGAGCTGCTTCTGTTCCTTCCTGCAGGCCCTCAATCGGGGGAAGGGACTCCTCCCCGAGCCCAACATCCTGCAGCT
CircID chr19:10323224|10323449
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MGAPWGCQGPSGTLSCFCSFLQALNRGKGLLPEPNILQL
Nucleotide Sequence ATGGGAGCCCCATGGGGATGTCAGGGCCCCAGCGGCACTCTGAGCTGCTTCTGTTCCTTCCTGCAGGCCCTCAATCGGGGGAAGGGACTCCTCCCCGAGCCCAACATCCTGCAGCTG
CircID chr19:10323224|10323449
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MRPWAPRPQYAGRSHRCPGHGEPVRAEVAGWGWEPHGDVRAPAAL
Nucleotide Sequence CTGCGCCCCTGGGCCCCCCGGCCGCAGTATGCTGGCCGCTCTCATCGCTGCCCAGGCCACGGTGAGCCTGTGCGGGCAGAGGTGGCGGGGTGGGGATGGGAGCCCCATGGGGATGTCAGGGCCCCAGCGGCACTCTGA
CircID chr19:10323224|10323449
ORF Type ORF4
Protein Length 55
Nucleotide Length 168
Protein Sequence MQDVGLGEESLPPIEGLQEGTEAAQSAAGALTSPWGSHPHPATSARTGSPWPGQR
Nucleotide Sequence CTGCAGGATGTTGGGCTCGGGGAGGAGTCCCTTCCCCCGATTGAGGGCCTGCAGGAAGGAACAGAAGCAGCTCAGAGTGCCGCTGGGGCCCTGACATCCCCATGGGGCTCCCATCCCCACCCCGCCACCTCTGCCCGCACAGGCTCACCGTGGCCTGGGCAGCGATGA
CircID chr19:10323224|10323449
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MLGSGRSPFPRLRACRKEQKQLRVPLGP
Nucleotide Sequence ATGTTGGGCTCGGGGAGGAGTCCCTTCCCCCGATTGAGGGCCTGCAGGAAGGAACAGAAGCAGCTCAGAGTGCCGCTGGGGCCCTGA
CircID chr19:10323224|10323449
ORF Type ORF6
Protein Length 31
Nucleotide Length 93
Protein Sequence MPAQAHRGLGSDESGQHTAAGGPRGAEGDSQ
Nucleotide Sequence CTGCCCGCACAGGCTCACCGTGGCCTGGGCAGCGATGAGAGCGGCCAGCATACTGCGGCCGGGGGGCCCAGGGGCGCAGAAGGAGACTCGCAG
CircID chr19:10323224|10323449
ORF Type ORF7
Protein Length 40
Nucleotide Length 120
Protein Sequence MGLPSPPRHLCPHRLTVAWAAMRAASILRPGGPGAQKETR
Nucleotide Sequence ATGGGGCTCCCATCCCCACCCCGCCACCTCTGCCCGCACAGGCTCACCGTGGCCTGGGCAGCGATGAGAGCGGCCAGCATACTGCGGCCGGGGGGCCCAGGGGCGCAGAAGGAGACTCGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab