CircRNA Information

General Information
circRNA Basic Information
CircID chr19:10681073|10681240
Strand -
CircType exon
Host Gene ENSG00000129351.16;
Algorism CIRI2;
Sequence CCTCTGCCTTCCAAGATGCCCAAGAAACCAAAGAATGAAAACCCAGTGGACTACACCGGTAAGCCTGCGGCGGTTGCCTGATGGCTGGGGCTCCAGGAAGAGTCACCATCTGCATCTCCCAGCCATGCCCTGGTCTCTCCTTGCAGTTCAGATCCCACCAAGCACCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:10681073|10681240 hsa-miR-185-5p 0 0 1
chr19:10681073|10681240 hsa-miR-185-3p 0 0 1
chr19:10681073|10681240 hsa-miR-432-5p 0 0 1
chr19:10681073|10681240 hsa-miR-432-3p 0 0 1
chr19:10681073|10681240 hsa-miR-578 0 0 1
chr19:10681073|10681240 hsa-miR-629-5p 0 0 1
chr19:10681073|10681240 hsa-miR-629-3p 0 0 1
chr19:10681073|10681240 hsa-miR-635 0 0 1
chr19:10681073|10681240 hsa-miR-636 0 0 1
chr19:10681073|10681240 hsa-miR-638 1 0 1
chr19:10681073|10681240 hsa-miR-659-5p 0 0 1
chr19:10681073|10681240 hsa-miR-659-3p 0 0 1
chr19:10681073|10681240 hsa-miR-1298-5p 0 0 1
chr19:10681073|10681240 hsa-miR-1298-3p 0 0 1
chr19:10681073|10681240 hsa-miR-541-5p 0 0 1
chr19:10681073|10681240 hsa-miR-541-3p 0 0 1
chr19:10681073|10681240 hsa-miR-1236-5p 0 0 1
chr19:10681073|10681240 hsa-miR-1236-3p 0 0 1
chr19:10681073|10681240 hsa-miR-1225-3p 0 0 1
chr19:10681073|10681240 hsa-miR-654-5p 0 0 1
chr19:10681073|10681240 hsa-miR-769-3p 1 0 1
chr19:10681073|10681240 hsa-miR-450b-3p 0 0 1
chr19:10681073|10681240 hsa-miR-9 0 0 1
chr19:10681073|10681240 hsa-miR-637 1 0 0
chr19:10681073|10681240 hsa-miR-762 1 0 0
chr19:10681073|10681240 hsa-miR-1268a 1 0 0
chr19:10681073|10681240 hsa-miR-3147 1 0 0
chr19:10681073|10681240 hsa-miR-4253 0 1 0
chr19:10681073|10681240 hsa-miR-4254 0 1 0
chr19:10681073|10681240 hsa-miR-3652 1 0 0
chr19:10681073|10681240 hsa-miR-3907 1 0 0
chr19:10681073|10681240 hsa-miR-3918 1 0 0
chr19:10681073|10681240 hsa-miR-1268b 1 0 0
chr19:10681073|10681240 hsa-miR-4428 0 1 0
chr19:10681073|10681240 hsa-miR-3689c 0 1 0
chr19:10681073|10681240 hsa-miR-4525 0 1 0
chr19:10681073|10681240 hsa-miR-4539 1 1 0
chr19:10681073|10681240 hsa-miR-4648 1 0 0
chr19:10681073|10681240 hsa-miR-4654 1 1 0
chr19:10681073|10681240 hsa-miR-5090 1 0 0
chr19:10681073|10681240 hsa-miR-5787 1 0 0
chr19:10681073|10681240 hsa-miR-6132 1 0 0
chr19:10681073|10681240 hsa-miR-7974 1 0 0
chr19:10681073|10681240 hsa-miR-8075 1 0 0
chr19:10681073|10681240 hsa-miR-12113 0 1 0
chr19:10681073|10681240 hsa-miR-323a-5p 1 0 0
chr19:10681073|10681240 hsa-miR-1273h-3p 1 0 0
chr19:10681073|10681240 hsa-miR-6825-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6720-5p 0 1 0
chr19:10681073|10681240 hsa-miR-6728-5p 1 0 0
chr19:10681073|10681240 hsa-miR-4786-5p 1 1 0
chr19:10681073|10681240 hsa-miR-3192-5p 1 1 0
chr19:10681073|10681240 hsa-miR-3622b-5p 1 1 0
chr19:10681073|10681240 hsa-miR-4655-5p 0 1 0
chr19:10681073|10681240 hsa-miR-8069 1 0 0
chr19:10681073|10681240 hsa-miR-6793-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6796-5p 1 0 0
chr19:10681073|10681240 hsa-miR-203b-3p 0 1 0
chr19:10681073|10681240 hsa-miR-4793-3p 1 0 0
chr19:10681073|10681240 hsa-miR-6821-5p 1 0 0
chr19:10681073|10681240 hsa-miR-30b-3p 0 1 0
chr19:10681073|10681240 hsa-miR-5006-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6753-5p 1 1 0
chr19:10681073|10681240 hsa-miR-30c-2-3p 0 1 0
chr19:10681073|10681240 hsa-miR-3127-5p 1 0 0
chr19:10681073|10681240 hsa-miR-296-3p 1 0 0
chr19:10681073|10681240 hsa-miR-2276-3p 0 1 0
chr19:10681073|10681240 hsa-miR-5002-5p 0 1 0
chr19:10681073|10681240 hsa-miR-1207-5p 1 0 0
chr19:10681073|10681240 hsa-miR-1233-5p 1 0 0
chr19:10681073|10681240 hsa-miR-3689b-3p 0 1 0
chr19:10681073|10681240 hsa-miR-6769b-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6778-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6775-5p 1 1 0
chr19:10681073|10681240 hsa-miR-6769a-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6851-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6774-5p 1 1 0
chr19:10681073|10681240 hsa-miR-6788-5p 0 1 0
chr19:10681073|10681240 hsa-miR-6797-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6879-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6862-5p 1 1 0
chr19:10681073|10681240 hsa-miR-3689a-3p 0 1 0
chr19:10681073|10681240 hsa-miR-4632-5p 1 0 0
chr19:10681073|10681240 hsa-miR-4685-5p 1 1 0
chr19:10681073|10681240 hsa-miR-4749-5p 0 1 0
chr19:10681073|10681240 hsa-miR-6848-5p 1 0 0
chr19:10681073|10681240 hsa-miR-4769-5p 1 0 0
chr19:10681073|10681240 hsa-miR-30c-1-3p 0 1 0
chr19:10681073|10681240 hsa-miR-6731-5p 1 1 0
chr19:10681073|10681240 hsa-miR-1914-3p 1 0 0
chr19:10681073|10681240 hsa-miR-4665-5p 1 0 0
chr19:10681073|10681240 hsa-miR-9851-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6529-5p 1 0 0
chr19:10681073|10681240 hsa-miR-6837-5p 1 1 0
chr19:10681073|10681240 hsa-miR-10394-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:10681073|10681240
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MPSKMPKKPKNENPVDYTGKPAAVA
Nucleotide Sequence CTGCCTTCCAAGATGCCCAAGAAACCAAAGAATGAAAACCCAGTGGACTACACCGGTAAGCCTGCGGCGGTTGCCTGA
CircID chr19:10681073|10681240
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MGLQEESPSASPSHALVSPCSSDPTKHH
Nucleotide Sequence CTGGGGCTCCAGGAAGAGTCACCATCTGCATCTCCCAGCCATGCCCTGGTCTCTCCTTGCAGTTCAGATCCCACCAAGCACCAC
CircID chr19:10681073|10681240
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MKTQWTTPVSLRRLPDGWGSRKSHHLHLPAMPWSLLAVQIPPST
Nucleotide Sequence ATGAAAACCCAGTGGACTACACCGGTAAGCCTGCGGCGGTTGCCTGATGGCTGGGGCTCCAGGAAGAGTCACCATCTGCATCTCCCAGCCATGCCCTGGTCTCTCCTTGCAGTTCAGATCCCACCAAGCACC
CircID chr19:10681073|10681240
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MMAGAPGRVTICISQPCPGLSLQFRSHQAP
Nucleotide Sequence CTGATGGCTGGGGCTCCAGGAAGAGTCACCATCTGCATCTCCCAGCCATGCCCTGGTCTCTCCTTGCAGTTCAGATCCCACCAAGCACCA
CircID chr19:10681073|10681240
ORF Type ORF5
Protein Length 32
Nucleotide Length 96
Protein Sequence MEPQPSGNRRRLTGVVHWVFILWFLGHLGRQR
Nucleotide Sequence CTGGAGCCCCAGCCATCAGGCAACCGCCGCAGGCTTACCGGTGTAGTCCACTGGGTTTTCATTCTTTGGTTTCTTGGGCATCTTGGAAGGCAGAGG
CircID chr19:10681073|10681240
ORF Type ORF6
Protein Length 36
Nucleotide Length 111
Protein Sequence MVGSELQGETRAWLGDADGDSSWSPSHQATAAGLPV
Nucleotide Sequence TTGGTGGGATCTGAACTGCAAGGAGAGACCAGGGCATGGCTGGGAGATGCAGATGGTGACTCTTCCTGGAGCCCCAGCCATCAGGCAACCGCCGCAGGCTTACCGGTGTAG
CircID chr19:10681073|10681240
ORF Type ORF7
Protein Length 50
Nucleotide Length 150
Protein Sequence MNCKERPGHGWEMQMVTLPGAPAIRQPPQAYRCSPLGFHSLVSWASWKAE
Nucleotide Sequence CTGAACTGCAAGGAGAGACCAGGGCATGGCTGGGAGATGCAGATGGTGACTCTTCCTGGAGCCCCAGCCATCAGGCAACCGCCGCAGGCTTACCGGTGTAGTCCACTGGGTTTTCATTCTTTGGTTTCTTGGGCATCTTGGAAGGCAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab