CircRNA Information

General Information
circRNA Basic Information
CircID chr19:1072402|1072575
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGGCTTTCACTGCCCTCCTCAGCCAGGGGTGGTGGCTTACACCTGTGACCCCAGCACTTTGGGAGGCTGAGGCAGGAGGACGGGTTGAGCCCAGGAATTCAAGACCAGCCTGGGCAATACAGTAAGACCCTGTCTCTGTAAGAAATAAAATAAAGAATAAAAAGCTAAATGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:1072402|1072575 hsa-miR-17-5p 0 0 1
chr19:1072402|1072575 hsa-miR-17-3p 0 0 1
chr19:1072402|1072575 hsa-miR-20a-5p 0 0 1
chr19:1072402|1072575 hsa-miR-20a-3p 0 0 1
chr19:1072402|1072575 hsa-miR-93-5p 0 0 1
chr19:1072402|1072575 hsa-miR-93-3p 0 0 1
chr19:1072402|1072575 hsa-miR-106a-5p 0 0 1
chr19:1072402|1072575 hsa-miR-106a-3p 0 0 1
chr19:1072402|1072575 hsa-miR-34a-5p 0 0 1
chr19:1072402|1072575 hsa-miR-34a-3p 0 0 1
chr19:1072402|1072575 hsa-miR-150-5p 0 0 1
chr19:1072402|1072575 hsa-miR-150-3p 0 0 1
chr19:1072402|1072575 hsa-miR-106b-5p 0 0 1
chr19:1072402|1072575 hsa-miR-106b-3p 0 0 1
chr19:1072402|1072575 hsa-miR-302a-5p 0 0 1
chr19:1072402|1072575 hsa-miR-302a-3p 0 0 1
chr19:1072402|1072575 hsa-miR-302b-5p 0 0 1
chr19:1072402|1072575 hsa-miR-302b-3p 0 0 1
chr19:1072402|1072575 hsa-miR-302c-5p 0 0 1
chr19:1072402|1072575 hsa-miR-302c-3p 0 0 1
chr19:1072402|1072575 hsa-miR-302d-5p 0 0 1
chr19:1072402|1072575 hsa-miR-302d-3p 0 0 1
chr19:1072402|1072575 hsa-miR-372-5p 0 0 1
chr19:1072402|1072575 hsa-miR-372-3p 0 0 1
chr19:1072402|1072575 hsa-miR-373-5p 0 0 1
chr19:1072402|1072575 hsa-miR-373-3p 0 0 1
chr19:1072402|1072575 hsa-miR-20b-5p 0 0 1
chr19:1072402|1072575 hsa-miR-20b-3p 0 0 1
chr19:1072402|1072575 hsa-miR-449a 0 0 1
chr19:1072402|1072575 hsa-miR-520e-5p 0 0 1
chr19:1072402|1072575 hsa-miR-520e-3p 0 0 1
chr19:1072402|1072575 hsa-miR-520b-5p 0 0 1
chr19:1072402|1072575 hsa-miR-520b-3p 0 0 1
chr19:1072402|1072575 hsa-miR-519d-5p 0 0 1
chr19:1072402|1072575 hsa-miR-519d-3p 0 0 1
chr19:1072402|1072575 hsa-miR-520g-5p 0 0 1
chr19:1072402|1072575 hsa-miR-520g-3p 0 0 1
chr19:1072402|1072575 hsa-miR-520h 0 0 1
chr19:1072402|1072575 hsa-miR-552-5p 0 0 1
chr19:1072402|1072575 hsa-miR-552-3p 0 0 1
chr19:1072402|1072575 hsa-miR-600 0 1 1
chr19:1072402|1072575 hsa-miR-449b-5p 0 0 1
chr19:1072402|1072575 hsa-miR-449b-3p 0 0 1
chr19:1072402|1072575 hsa-miR-1182 0 0 1
chr19:1072402|1072575 hsa-miR-1183 0 0 1
chr19:1072402|1072575 hsa-miR-1247-5p 0 0 1
chr19:1072402|1072575 hsa-miR-1247-3p 0 0 1
chr19:1072402|1072575 hsa-miR-302e 0 0 1
chr19:1072402|1072575 hsa-miR-512-3p 0 1 1
chr19:1072402|1072575 hsa-miR-615-5p 0 0 1
chr19:1072402|1072575 hsa-miR-193a-5p 0 0 1
chr19:1072402|1072575 hsa-miR-331-3p 0 0 1
chr19:1072402|1072575 hsa-miR-513a-5p 0 0 1
chr19:1072402|1072575 hsa-miR-520d-3p 0 0 1
chr19:1072402|1072575 hsa-miR-34c-5p 0 1 1
chr19:1072402|1072575 hsa-miR-520a-3p 0 0 1
chr19:1072402|1072575 hsa-miR-520c-3p 0 0 1
chr19:1072402|1072575 hsa-miR-220b 0 0 1
chr19:1072402|1072575 hsa-miR-220c 0 0 1
chr19:1072402|1072575 hsa-miR-1303 1 1 0
chr19:1072402|1072575 hsa-miR-1538 1 0 0
chr19:1072402|1072575 hsa-miR-4452 0 1 0
chr19:1072402|1072575 hsa-miR-4512 0 1 0
chr19:1072402|1072575 hsa-miR-4689 0 1 0
chr19:1072402|1072575 hsa-miR-4779 0 1 0
chr19:1072402|1072575 hsa-miR-5704 0 1 0
chr19:1072402|1072575 hsa-miR-4731-5p 0 1 0
chr19:1072402|1072575 hsa-miR-7155-5p 0 1 0
chr19:1072402|1072575 hsa-miR-6747-3p 0 1 0
chr19:1072402|1072575 hsa-miR-6881-3p 0 1 0
chr19:1072402|1072575 hsa-miR-6515-5p 0 1 0
chr19:1072402|1072575 hsa-miR-7160-5p 0 1 0
chr19:1072402|1072575 hsa-miR-6721-5p 0 1 0
chr19:1072402|1072575 hsa-miR-1343-3p 1 1 0
chr19:1072402|1072575 hsa-miR-939-3p 0 1 0
chr19:1072402|1072575 hsa-miR-1237-3p 0 1 0
chr19:1072402|1072575 hsa-miR-4524a-3p 0 1 0
chr19:1072402|1072575 hsa-miR-7158-5p 0 1 0
chr19:1072402|1072575 hsa-miR-4524b-3p 0 1 0
chr19:1072402|1072575 hsa-miR-6879-5p 0 1 0
chr19:1072402|1072575 hsa-miR-4728-5p 0 1 0
chr19:1072402|1072575 hsa-miR-6735-5p 0 1 0
chr19:1072402|1072575 hsa-miR-6858-5p 0 1 0
chr19:1072402|1072575 hsa-miR-7843-5p 0 1 0
chr19:1072402|1072575 hsa-miR-6783-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:1072402|1072575
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence LAFTALLSQGWWLTPVTPALWEAEAGGRVEPRNSRPAWAIQ
Nucleotide Sequence CTGGCTTTCACTGCCCTCCTCAGCCAGGGGTGGTGGCTTACACCTGTGACCCCAGCACTTTGGGAGGCTGAGGCAGGAGGACGGGTTGAGCCCAGGAATTCAAGACCAGCCTGGGCAATACAGTAA

CircID chr19:1072402|1072575
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MGSTRPPASASQSAGVTGVSHHPWLRRAVKA
Nucleotide Sequence CTGGGCTCAACCCGTCCTCCTGCCTCAGCCTCCCAAAGTGCTGGGGTCACAGGTGTAAGCCACCACCCCTGGCTGAGGAGGGCAGTGAAAGCC

CircID chr19:1072402|1072575
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MPRLVLNSWAQPVLLPQPPKVLGSQV
Nucleotide Sequence TTGCCCAGGCTGGTCTTGAATTCCTGGGCTCAACCCGTCCTCCTGCCTCAGCCTCCCAAAGTGCTGGGGTCACAGGTGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites