CircRNA Information

General Information
circRNA Basic Information
CircID chr19:10921050|10921443
Strand +
CircType exon
Host Gene ENSG00000142453.10;
Algorism CIRI2;
Sequence CTTGGACAATCCCCGTGCTCATTATGGAGCCCATCCGGGAGTGGGTGTGATTGACAATCCCCGTGTTGGCTGCGCAGCGAGAGGGAGGAAAGAAGGAAGGGAGACGGCGTCACCGCCCCCAGCCACCCAGCCCATGCACAGCAGCAGGCTGCAGAGCGAGGCAGAGAGGACGGAGAGCCTCGGCCGAGAGCCCCCAGGAAGAGGAAAAGGTGAAAGGACCAAGCAGAGGCCGACCCTGGTCACCACAGGCCCTTCCCGGCCCCTGGGCAGTCCTGGGCATGGCTCCCTGCTGCCCCTGGCCCTGGGGGACACTCACCTAAAGGAATCAGGTTGTTGTGGCCCACGCTGGAGCCACTGGCAATAACACTGCTCAAGTCATAGGCGGTCGGCATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:10921050|10921443 hsa-miR-214-5p 0 0 1
chr19:10921050|10921443 hsa-miR-214-3p 0 0 1
chr19:10921050|10921443 hsa-miR-137-5p 0 0 1
chr19:10921050|10921443 hsa-miR-137-3p 0 0 1
chr19:10921050|10921443 hsa-miR-370-5p 0 0 1
chr19:10921050|10921443 hsa-miR-370-3p 0 0 1
chr19:10921050|10921443 hsa-miR-133b 0 1 1
chr19:10921050|10921443 hsa-miR-596 0 0 1
chr19:10921050|10921443 hsa-miR-602 0 0 1
chr19:10921050|10921443 hsa-miR-637 1 1 1
chr19:10921050|10921443 hsa-miR-639 0 1 1
chr19:10921050|10921443 hsa-miR-766-5p 0 0 1
chr19:10921050|10921443 hsa-miR-766-3p 0 0 1
chr19:10921050|10921443 hsa-miR-1228-5p 0 0 1
chr19:10921050|10921443 hsa-miR-1228-3p 0 0 1
chr19:10921050|10921443 hsa-miR-1234-3p 0 0 1
chr19:10921050|10921443 hsa-miR-1236-5p 0 0 1
chr19:10921050|10921443 hsa-miR-1236-3p 0 0 1
chr19:10921050|10921443 hsa-miR-1237-5p 0 0 1
chr19:10921050|10921443 hsa-miR-1237-3p 0 0 1
chr19:10921050|10921443 hsa-miR-1238-5p 0 0 1
chr19:10921050|10921443 hsa-miR-1238-3p 0 0 1
chr19:10921050|10921443 hsa-miR-1202 0 0 1
chr19:10921050|10921443 hsa-miR-1205 0 0 1
chr19:10921050|10921443 hsa-miR-1293 0 0 1
chr19:10921050|10921443 hsa-miR-1248 0 0 1
chr19:10921050|10921443 hsa-miR-1288-5p 0 0 1
chr19:10921050|10921443 hsa-miR-1288-3p 0 0 1
chr19:10921050|10921443 hsa-miR-1307-5p 0 0 1
chr19:10921050|10921443 hsa-miR-1307-3p 0 0 1
chr19:10921050|10921443 hsa-miR-1234 0 0 1
chr19:10921050|10921443 hsa-miR-486-3p 1 0 1
chr19:10921050|10921443 hsa-miR-542-5p 0 1 1
chr19:10921050|10921443 hsa-miR-1184 0 0 1
chr19:10921050|10921443 hsa-miR-574-5p 0 0 1
chr19:10921050|10921443 hsa-miR-361-3p 0 0 1
chr19:10921050|10921443 hsa-miR-886-5p 0 0 1
chr19:10921050|10921443 hsa-miR-642 0 0 1
chr19:10921050|10921443 hsa-miR-720 0 0 1
chr19:10921050|10921443 hsa-miR-220a 0 0 1
chr19:10921050|10921443 hsa-miR-133a 0 0 1
chr19:10921050|10921443 hsa-miR-219-5p 0 0 1
chr19:10921050|10921443 hsa-miR-449a 0 1 0
chr19:10921050|10921443 hsa-miR-762 1 1 0
chr19:10921050|10921443 hsa-miR-1538 1 0 0
chr19:10921050|10921443 hsa-miR-2278 0 1 0
chr19:10921050|10921443 hsa-miR-2861 0 1 0
chr19:10921050|10921443 hsa-miR-3137 1 0 0
chr19:10921050|10921443 hsa-miR-3183 0 1 0
chr19:10921050|10921443 hsa-miR-3196 1 1 0
chr19:10921050|10921443 hsa-miR-4270 1 1 0
chr19:10921050|10921443 hsa-miR-3615 1 0 0
chr19:10921050|10921443 hsa-miR-3909 1 1 0
chr19:10921050|10921443 hsa-miR-3918 0 1 0
chr19:10921050|10921443 hsa-miR-1268b 1 0 0
chr19:10921050|10921443 hsa-miR-4469 0 1 0
chr19:10921050|10921443 hsa-miR-4488 1 1 0
chr19:10921050|10921443 hsa-miR-4498 0 1 0
chr19:10921050|10921443 hsa-miR-4505 0 1 0
chr19:10921050|10921443 hsa-miR-4507 1 0 0
chr19:10921050|10921443 hsa-miR-1587 1 1 0
chr19:10921050|10921443 hsa-miR-4656 1 0 0
chr19:10921050|10921443 hsa-miR-4688 1 1 0
chr19:10921050|10921443 hsa-miR-4734 1 0 0
chr19:10921050|10921443 hsa-miR-4739 1 0 0
chr19:10921050|10921443 hsa-miR-4741 1 0 0
chr19:10921050|10921443 hsa-miR-5693 0 1 0
chr19:10921050|10921443 hsa-miR-5787 1 1 0
chr19:10921050|10921443 hsa-miR-6081 1 0 0
chr19:10921050|10921443 hsa-miR-6860 1 1 0
chr19:10921050|10921443 hsa-miR-7974 1 0 0
chr19:10921050|10921443 hsa-miR-9718 1 0 0
chr19:10921050|10921443 hsa-miR-9899 1 0 0
chr19:10921050|10921443 hsa-miR-6749-3p 0 1 0
chr19:10921050|10921443 hsa-miR-29a-5p 0 1 0
chr19:10921050|10921443 hsa-miR-128-1-5p 0 1 0
chr19:10921050|10921443 hsa-miR-4731-5p 0 1 0
chr19:10921050|10921443 hsa-miR-6840-3p 0 1 0
chr19:10921050|10921443 hsa-miR-3194-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6747-3p 0 1 0
chr19:10921050|10921443 hsa-miR-4665-3p 1 1 0
chr19:10921050|10921443 hsa-miR-6822-3p 1 0 0
chr19:10921050|10921443 hsa-miR-125a-3p 1 0 0
chr19:10921050|10921443 hsa-miR-6089 1 0 0
chr19:10921050|10921443 hsa-miR-4722-5p 1 0 0
chr19:10921050|10921443 hsa-miR-593-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6741-5p 1 0 0
chr19:10921050|10921443 hsa-miR-8069 1 0 0
chr19:10921050|10921443 hsa-miR-6776-5p 0 1 0
chr19:10921050|10921443 hsa-miR-6873-3p 1 1 0
chr19:10921050|10921443 hsa-miR-6849-3p 1 0 0
chr19:10921050|10921443 hsa-miR-6817-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6832-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6845-3p 1 0 0
chr19:10921050|10921443 hsa-miR-423-3p 1 0 0
chr19:10921050|10921443 hsa-miR-3180-3p 1 1 0
chr19:10921050|10921443 hsa-miR-6793-5p 1 0 0
chr19:10921050|10921443 hsa-miR-4697-3p 1 0 0
chr19:10921050|10921443 hsa-miR-2467-5p 0 1 0
chr19:10921050|10921443 hsa-miR-6827-5p 1 1 0
chr19:10921050|10921443 hsa-miR-6728-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6821-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6735-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6882-3p 1 1 0
chr19:10921050|10921443 hsa-miR-1343-3p 0 1 0
chr19:10921050|10921443 hsa-miR-1229-5p 1 0 0
chr19:10921050|10921443 hsa-miR-1908-3p 1 0 0
chr19:10921050|10921443 hsa-miR-4640-5p 1 1 0
chr19:10921050|10921443 hsa-miR-6753-5p 0 1 0
chr19:10921050|10921443 hsa-miR-5001-3p 1 1 0
chr19:10921050|10921443 hsa-miR-885-3p 1 1 0
chr19:10921050|10921443 hsa-miR-7113-3p 1 0 0
chr19:10921050|10921443 hsa-miR-296-3p 1 0 0
chr19:10921050|10921443 hsa-miR-6823-5p 1 0 0
chr19:10921050|10921443 hsa-miR-4783-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6878-3p 0 1 0
chr19:10921050|10921443 hsa-miR-7111-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6830-3p 1 1 0
chr19:10921050|10921443 hsa-miR-4787-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6824-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6789-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6800-5p 1 1 0
chr19:10921050|10921443 hsa-miR-7156-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6786-3p 1 0 0
chr19:10921050|10921443 hsa-miR-6825-3p 1 0 0
chr19:10921050|10921443 hsa-miR-6895-5p 0 1 0
chr19:10921050|10921443 hsa-miR-654-5p 0 1 0
chr19:10921050|10921443 hsa-miR-6811-3p 1 0 0
chr19:10921050|10921443 hsa-miR-345-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6499-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6872-3p 0 1 0
chr19:10921050|10921443 hsa-miR-3605-3p 1 0 0
chr19:10921050|10921443 hsa-miR-3124-3p 0 1 0
chr19:10921050|10921443 hsa-miR-4485-5p 1 0 0
chr19:10921050|10921443 hsa-miR-5003-5p 0 1 0
chr19:10921050|10921443 hsa-miR-133a-3p 0 1 0
chr19:10921050|10921443 hsa-miR-1207-5p 1 0 0
chr19:10921050|10921443 hsa-miR-4763-3p 1 0 0
chr19:10921050|10921443 hsa-miR-6812-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6816-5p 1 0 0
chr19:10921050|10921443 hsa-miR-1343-5p 1 0 0
chr19:10921050|10921443 hsa-miR-3180 0 1 0
chr19:10921050|10921443 hsa-miR-6743-5p 1 1 0
chr19:10921050|10921443 hsa-miR-6754-5p 0 1 0
chr19:10921050|10921443 hsa-miR-6756-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6803-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6722-3p 1 1 0
chr19:10921050|10921443 hsa-miR-4685-3p 1 1 0
chr19:10921050|10921443 hsa-miR-6754-3p 1 1 0
chr19:10921050|10921443 hsa-miR-6852-3p 0 1 0
chr19:10921050|10921443 hsa-miR-1915-3p 1 1 0
chr19:10921050|10921443 hsa-miR-3620-5p 1 1 0
chr19:10921050|10921443 hsa-miR-5196-5p 1 1 0
chr19:10921050|10921443 hsa-miR-1909-3p 1 1 0
chr19:10921050|10921443 hsa-miR-328-5p 1 0 0
chr19:10921050|10921443 hsa-miR-449c-5p 1 1 0
chr19:10921050|10921443 hsa-miR-4632-5p 1 0 0
chr19:10921050|10921443 hsa-miR-4649-5p 1 0 0
chr19:10921050|10921443 hsa-miR-4685-5p 1 1 0
chr19:10921050|10921443 hsa-miR-4726-5p 1 1 0
chr19:10921050|10921443 hsa-miR-4749-5p 1 1 0
chr19:10921050|10921443 hsa-miR-6729-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6777-5p 1 1 0
chr19:10921050|10921443 hsa-miR-6848-5p 1 1 0
chr19:10921050|10921443 hsa-miR-6889-5p 1 0 0
chr19:10921050|10921443 hsa-miR-4697-5p 0 1 0
chr19:10921050|10921443 hsa-miR-6877-3p 1 0 0
chr19:10921050|10921443 hsa-miR-4747-5p 0 1 0
chr19:10921050|10921443 hsa-miR-6785-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6791-5p 1 0 0
chr19:10921050|10921443 hsa-miR-6762-5p 1 1 0
chr19:10921050|10921443 hsa-miR-4757-5p 0 1 0
chr19:10921050|10921443 hsa-miR-10400-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6837-5p 1 1 0
chr19:10921050|10921443 hsa-miR-3059-5p 0 1 0
chr19:10921050|10921443 hsa-miR-4723-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6769b-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6744-3p 0 1 0
chr19:10921050|10921443 hsa-miR-6783-3p 0 1 0
chr19:10921050|10921443 hsa-miR-4691-5p 0 1 0
chr19:10921050|10921443 hsa-miR-449b-5p 0 1 0
chr19:10921050|10921443 hsa-miR-6876-3p 1 1 0
chr19:10921050|10921443 hsa-miR-3619-5p 0 1 0
chr19:10921050|10921443 hsa-miR-6764-5p 0 1 0
chr19:10921050|10921443 hsa-miR-4800-3p 1 0 0
chr19:10921050|10921443 hsa-miR-6766-3p 0 1 0
chr19:10921050|10921443 hsa-miR-340-3p 0 1 0
chr19:10921050|10921443 hsa-miR-362-3p 0 1 0
chr19:10921050|10921443 hsa-miR-4782-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:10921050|10921443
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MRSEREERRKGDGVTAPSHPAHAQQQAAERGREDGEPRPRAPRKRKR
Nucleotide Sequence CTGCGCAGCGAGAGGGAGGAAAGAAGGAAGGGAGACGGCGTCACCGCCCCCAGCCACCCAGCCCATGCACAGCAGCAGGCTGCAGAGCGAGGCAGAGAGGACGGAGAGCCTCGGCCGAGAGCCCCCAGGAAGAGGAAAAGGTGA
CircID chr19:10921050|10921443
ORF Type ORF2
Protein Length 120
Nucleotide Length 363
Protein Sequence LDNPRAHYGAHPGVGVIDNPRVGCAARGRKEGRETASPPPATQPMHSSRLQSEAERTESLGREPPGRGKGERTKQRPTLVTTGPSRPLGSPGHGSLLPLALGDTHLKESGCCGPRWSHWQ
Nucleotide Sequence TTGGACAATCCCCGTGCTCATTATGGAGCCCATCCGGGAGTGGGTGTGATTGACAATCCCCGTGTTGGCTGCGCAGCGAGAGGGAGGAAAGAAGGAAGGGAGACGGCGTCACCGCCCCCAGCCACCCAGCCCATGCACAGCAGCAGGCTGCAGAGCGAGGCAGAGAGGACGGAGAGCCTCGGCCGAGAGCCCCCAGGAAGAGGAAAAGGTGAAAGGACCAAGCAGAGGCCGACCCTGGTCACCACAGGCCCTTCCCGGCCCCTGGGCAGTCCTGGGCATGGCTCCCTGCTGCCCCTGGCCCTGGGGGACACTCACCTAAAGGAATCAGGTTGTTGTGGCCCACGCTGGAGCCACTGGCAATAA
CircID chr19:10921050|10921443
ORF Type ORF3
Protein Length 89
Nucleotide Length 270
Protein Sequence MTIPVLAAQREGGKKEGRRRHRPQPPSPCTAAGCRARQRGRRASAESPQEEEKVKGPSRGRPWSPQALPGPWAVLGMAPCCPWPWGTLT
Nucleotide Sequence TTGACAATCCCCGTGTTGGCTGCGCAGCGAGAGGGAGGAAAGAAGGAAGGGAGACGGCGTCACCGCCCCCAGCCACCCAGCCCATGCACAGCAGCAGGCTGCAGAGCGAGGCAGAGAGGACGGAGAGCCTCGGCCGAGAGCCCCCAGGAAGAGGAAAAGGTGAAAGGACCAAGCAGAGGCCGACCCTGGTCACCACAGGCCCTTCCCGGCCCCTGGGCAGTCCTGGGCATGGCTCCCTGCTGCCCCTGGCCCTGGGGGACACTCACCTAA
CircID chr19:10921050|10921443
ORF Type ORF4
Protein Length 56
Nucleotide Length 171
Protein Sequence MPRTAQGPGRACGDQGRPLLGPFTFSSSWGLSAEALRPLCLALQPAAVHGLGGWGR
Nucleotide Sequence ATGCCCAGGACTGCCCAGGGGCCGGGAAGGGCCTGTGGTGACCAGGGTCGGCCTCTGCTTGGTCCTTTCACCTTTTCCTCTTCCTGGGGGCTCTCGGCCGAGGCTCTCCGTCCTCTCTGCCTCGCTCTGCAGCCTGCTGCTGTGCATGGGCTGGGTGGCTGGGGGCGGTGA
CircID chr19:10921050|10921443
ORF Type ORF5
Protein Length 82
Nucleotide Length 249
Protein Sequence MPRGREGPVVTRVGLCLVLSPFPLPGGSRPRLSVLSASLCSLLLCMGWVAGGGDAVSLPSFLPLAAQPTRGLSITPTPGWAP
Nucleotide Sequence CTGCCCAGGGGCCGGGAAGGGCCTGTGGTGACCAGGGTCGGCCTCTGCTTGGTCCTTTCACCTTTTCCTCTTCCTGGGGGCTCTCGGCCGAGGCTCTCCGTCCTCTCTGCCTCGCTCTGCAGCCTGCTGCTGTGCATGGGCTGGGTGGCTGGGGGCGGTGACGCCGTCTCCCTTCCTTCTTTCCTCCCTCTCGCTGCGCAGCCAACACGGGGATTGTCAATCACACCCACTCCCGGATGGGCTCCATAA
CircID chr19:10921050|10921443
ORF Type ORF6
Protein Length 50
Nucleotide Length 153
Protein Sequence MPTAYDLSSVIASGSSVGHNNLIPLGECPPGPGAAGSHAQDCPGAGKGLW
Nucleotide Sequence ATGCCGACCGCCTATGACTTGAGCAGTGTTATTGCCAGTGGCTCCAGCGTGGGCCACAACAACCTGATTCCTTTAGGTGAGTGTCCCCCAGGGCCAGGGGCAGCAGGGAGCCATGCCCAGGACTGCCCAGGGGCCGGGAAGGGCCTGTGGTGA
CircID chr19:10921050|10921443
ORF Type ORF7
Protein Length 65
Nucleotide Length 195
Protein Sequence MGALGRGSPSSLPRSAACCCAWAGWLGAVTPSPFLLSSLSLRSQHGDCQSHPLPDGLHNEHGDCP
Nucleotide Sequence CTGGGGGCTCTCGGCCGAGGCTCTCCGTCCTCTCTGCCTCGCTCTGCAGCCTGCTGCTGTGCATGGGCTGGGTGGCTGGGGGCGGTGACGCCGTCTCCCTTCCTTCTTTCCTCCCTCTCGCTGCGCAGCCAACACGGGGATTGTCAATCACACCCACTCCCGGATGGGCTCCATAATGAGCACGGGGATTGTCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab