CircRNA Information

General Information
circRNA Basic Information
CircID chr19:10923589|10923865
Strand +
CircType exon
Host Gene ENSG00000130733.9;
Algorism CIRI2;
Sequence GGCTACTCCCTCTTTGTCTTCATCCCCATGGTGGTGAGTGTGGCCTGGCGCGGAGTGGGTGGTGGCTGTGTGGGGACACTGGCATGGTCACCTGCCGCCTCATTCCCATGGTGGTGAGGGTGGCCTGGTGCAGAGTGGGTGGTGGCTGGGGGGACTGGCATGGTCACCTGCCGCCGTGTTGCTCCCAGGTCCTGTGGCTCATCCCTGTGCCTTGGCTGCAGTGGCTCTTTGGGGCGCTGGCCCTGGGCCTGTCAGCCGCCGGGCTGGTATTCACCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:10923589|10923865 hsa-miR-197-5p 0 0 1
chr19:10923589|10923865 hsa-miR-197-3p 0 0 1
chr19:10923589|10923865 hsa-miR-492 0 1 1
chr19:10923589|10923865 hsa-miR-506-5p 0 0 1
chr19:10923589|10923865 hsa-miR-506-3p 0 0 1
chr19:10923589|10923865 hsa-miR-583 0 0 1
chr19:10923589|10923865 hsa-miR-591 0 1 1
chr19:10923589|10923865 hsa-miR-631 0 0 1
chr19:10923589|10923865 hsa-miR-634 0 0 1
chr19:10923589|10923865 hsa-miR-920 0 0 1
chr19:10923589|10923865 hsa-miR-937-5p 0 0 1
chr19:10923589|10923865 hsa-miR-937-3p 0 0 1
chr19:10923589|10923865 hsa-miR-1255a 0 1 1
chr19:10923589|10923865 hsa-miR-1276 0 1 1
chr19:10923589|10923865 hsa-miR-125a-3p 0 0 1
chr19:10923589|10923865 hsa-miR-767-5p 0 0 1
chr19:10923589|10923865 hsa-miR-199a-5p 0 1 1
chr19:10923589|10923865 hsa-miR-1184 0 0 1
chr19:10923589|10923865 hsa-miR-361-3p 0 0 1
chr19:10923589|10923865 hsa-miR-199b-5p 0 0 1
chr19:10923589|10923865 hsa-miR-509-3-5p 0 1 1
chr19:10923589|10923865 hsa-miR-509-5p 0 1 1
chr19:10923589|10923865 hsa-miR-220b 0 0 1
chr19:10923589|10923865 hsa-miR-1255b 0 0 1
chr19:10923589|10923865 hsa-miR-220c 0 0 1
chr19:10923589|10923865 hsa-miR-124 0 0 1
chr19:10923589|10923865 hsa-miR-3137 1 0 0
chr19:10923589|10923865 hsa-miR-3196 1 1 0
chr19:10923589|10923865 hsa-miR-4252 0 1 0
chr19:10923589|10923865 hsa-miR-4267 0 1 0
chr19:10923589|10923865 hsa-miR-3661 0 1 0
chr19:10923589|10923865 hsa-miR-3665 0 1 0
chr19:10923589|10923865 hsa-miR-4467 0 1 0
chr19:10923589|10923865 hsa-miR-4510 0 1 0
chr19:10923589|10923865 hsa-miR-4526 0 1 0
chr19:10923589|10923865 hsa-miR-3972 1 0 0
chr19:10923589|10923865 hsa-miR-4688 1 0 0
chr19:10923589|10923865 hsa-miR-4736 0 1 0
chr19:10923589|10923865 hsa-miR-5690 0 1 0
chr19:10923589|10923865 hsa-miR-5704 0 1 0
chr19:10923589|10923865 hsa-miR-6127 0 1 0
chr19:10923589|10923865 hsa-miR-6130 0 1 0
chr19:10923589|10923865 hsa-miR-150-3p 1 0 0
chr19:10923589|10923865 hsa-miR-17-3p 0 1 0
chr19:10923589|10923865 hsa-miR-6765-5p 0 1 0
chr19:10923589|10923865 hsa-miR-1972 0 1 0
chr19:10923589|10923865 hsa-miR-7851-3p 0 1 0
chr19:10923589|10923865 hsa-miR-5187-5p 0 1 0
chr19:10923589|10923865 hsa-miR-6807-5p 0 1 0
chr19:10923589|10923865 hsa-miR-6757-5p 0 1 0
chr19:10923589|10923865 hsa-miR-1301-3p 1 0 0
chr19:10923589|10923865 hsa-miR-6820-5p 0 1 0
chr19:10923589|10923865 hsa-miR-7845-5p 1 0 0
chr19:10923589|10923865 hsa-miR-6716-5p 0 1 0
chr19:10923589|10923865 hsa-miR-6798-5p 1 0 0
chr19:10923589|10923865 hsa-miR-4713-5p 1 0 0
chr19:10923589|10923865 hsa-miR-4640-5p 1 0 0
chr19:10923589|10923865 hsa-miR-4691-3p 0 1 0
chr19:10923589|10923865 hsa-miR-7156-3p 0 1 0
chr19:10923589|10923865 hsa-miR-6895-5p 0 1 0
chr19:10923589|10923865 hsa-miR-4758-3p 0 1 0
chr19:10923589|10923865 hsa-miR-6872-3p 0 1 0
chr19:10923589|10923865 hsa-miR-6746-3p 0 1 0
chr19:10923589|10923865 hsa-miR-6777-3p 0 1 0
chr19:10923589|10923865 hsa-miR-4717-5p 0 1 0
chr19:10923589|10923865 hsa-miR-552-3p 0 1 0
chr19:10923589|10923865 hsa-miR-124-3p 0 1 0
chr19:10923589|10923865 hsa-miR-10400-5p 1 0 0
chr19:10923589|10923865 hsa-miR-6778-5p 0 1 0
chr19:10923589|10923865 hsa-miR-6812-5p 1 0 0
chr19:10923589|10923865 hsa-miR-7110-5p 0 1 0
chr19:10923589|10923865 hsa-miR-1915-3p 0 1 0
chr19:10923589|10923865 hsa-miR-4685-5p 0 1 0
chr19:10923589|10923865 hsa-miR-4726-5p 1 0 0
chr19:10923589|10923865 hsa-miR-4745-3p 0 1 0
chr19:10923589|10923865 hsa-miR-6735-5p 1 0 0
chr19:10923589|10923865 hsa-miR-4700-5p 0 1 0
chr19:10923589|10923865 hsa-miR-324-3p 0 1 0
chr19:10923589|10923865 hsa-miR-6837-5p 0 1 0
chr19:10923589|10923865 hsa-miR-6511b-3p 0 1 0
chr19:10923589|10923865 hsa-miR-6764-5p 0 1 0
chr19:10923589|10923865 hsa-miR-1255b-5p 0 1 0
chr19:10923589|10923865 hsa-miR-216b-3p 0 1 0
chr19:10923589|10923865 hsa-miR-3064-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:10923589|10923865
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MVVSVAWRGVGGGCVGTLAWSPAASFPWW
Nucleotide Sequence ATGGTGGTGAGTGTGGCCTGGCGCGGAGTGGGTGGTGGCTGTGTGGGGACACTGGCATGGTCACCTGCCGCCTCATTCCCATGGTGGTGA
CircID chr19:10923589|10923865
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MVTCRRVAPRSCGSSLCLGCSGSLGRWPWACQPPGWYSP
Nucleotide Sequence ATGGTCACCTGCCGCCGTGTTGCTCCCAGGTCCTGTGGCTCATCCCTGTGCCTTGGCTGCAGTGGCTCTTTGGGGCGCTGGCCCTGGGCCTGTCAGCCGCCGGGCTGGTATTCACCC
CircID chr19:10923589|10923865
ORF Type ORF3
Protein Length 62
Nucleotide Length 186
Protein Sequence MPPHSHGGEGGLVQSGWWLGGLAWSPAAVLLPGPVAHPCALAAVALWGAGPGPVSRRAGIHP
Nucleotide Sequence CTGCCGCCTCATTCCCATGGTGGTGAGGGTGGCCTGGTGCAGAGTGGGTGGTGGCTGGGGGGACTGGCATGGTCACCTGCCGCCGTGTTGCTCCCAGGTCCTGTGGCTCATCCCTGTGCCTTGGCTGCAGTGGCTCTTTGGGGCGCTGGCCCTGGGCCTGTCAGCCGCCGGGCTGGTATTCACCCT
CircID chr19:10923589|10923865
ORF Type ORF4
Protein Length 77
Nucleotide Length 231
Protein Sequence MARSGWWLCGDTGMVTCRLIPMVVRVAWCRVGGGWGDWHGHLPPCCSQVLWLIPVPWLQWLFGALALGLSAAGLVFT
Nucleotide Sequence CTGGCGCGGAGTGGGTGGTGGCTGTGTGGGGACACTGGCATGGTCACCTGCCGCCTCATTCCCATGGTGGTGAGGGTGGCCTGGTGCAGAGTGGGTGGTGGCTGGGGGGACTGGCATGGTCACCTGCCGCCGTGTTGCTCCCAGGTCCTGTGGCTCATCCCTGTGCCTTGGCTGCAGTGGCTCTTTGGGGCGCTGGCCCTGGGCCTGTCAGCCGCCGGGCTGGTATTCACC
CircID chr19:10923589|10923865
ORF Type ORF5
Protein Length 37
Nucleotide Length 114
Protein Sequence MHQATLTTMGMRRQVTMPVSPHSHHPLRARPHSPPWG
Nucleotide Sequence CTGCACCAGGCCACCCTCACCACCATGGGAATGAGGCGGCAGGTGACCATGCCAGTGTCCCCACACAGCCACCACCCACTCCGCGCCAGGCCACACTCACCACCATGGGGATGA
CircID chr19:10923589|10923865
ORF Type ORF6
Protein Length 72
Nucleotide Length 219
Protein Sequence MQPRHRDEPQDLGATRRQVTMPVPPATTHSAPGHPHHHGNEAAGDHASVPTQPPPTPRQATLTTMGMKTKRE
Nucleotide Sequence CTGCAGCCAAGGCACAGGGATGAGCCACAGGACCTGGGAGCAACACGGCGGCAGGTGACCATGCCAGTCCCCCCAGCCACCACCCACTCTGCACCAGGCCACCCTCACCACCATGGGAATGAGGCGGCAGGTGACCATGCCAGTGTCCCCACACAGCCACCACCCACTCCGCGCCAGGCCACACTCACCACCATGGGGATGAAGACAAAGAGGGAGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab