CircRNA Information

General Information
circRNA Basic Information
CircID chr19:1108934|1109206
Strand +
CircType exon
Host Gene ENSG00000064932.14;
Algorism CIRI2;
Sequence CGCGGAGGAGGCCAAGGAGCCCTGGGAGAGTGGCTACGCTTTGTCGCTGACGCACTGCAGCCACAGCGCCTGGTGAGGGCGGGCCGGGGACCAGGGGGAAACCGGCAGATGGCGGCGACCCAGGCGGGGATCGGGGGCTCCCGAGACCCTGAGAGGAGGCGGGAGATCTCAGGGCACCTGGGGAGCCTGCGGGCCCCTGGGACCCGCCTGAGCCGAGACGACCCGTCTCGTCCGCAGGAACCGGCACTGCCGGCTGGCGCAGGAGGGTAAGGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:1108934|1109206 hsa-miR-34a-5p 0 0 1
chr19:1108934|1109206 hsa-miR-34a-3p 0 0 1
chr19:1108934|1109206 hsa-miR-150-5p 0 0 1
chr19:1108934|1109206 hsa-miR-150-3p 0 0 1
chr19:1108934|1109206 hsa-miR-449a 0 0 1
chr19:1108934|1109206 hsa-miR-484 0 0 1
chr19:1108934|1109206 hsa-miR-604 0 0 1
chr19:1108934|1109206 hsa-miR-647 0 0 1
chr19:1108934|1109206 hsa-miR-661 1 1 1
chr19:1108934|1109206 hsa-miR-449b-5p 0 0 1
chr19:1108934|1109206 hsa-miR-449b-3p 0 0 1
chr19:1108934|1109206 hsa-miR-874-5p 0 0 1
chr19:1108934|1109206 hsa-miR-874-3p 0 0 1
chr19:1108934|1109206 hsa-miR-1182 0 1 1
chr19:1108934|1109206 hsa-miR-1226-5p 0 0 1
chr19:1108934|1109206 hsa-miR-1226-3p 0 0 1
chr19:1108934|1109206 hsa-miR-1266-5p 0 0 1
chr19:1108934|1109206 hsa-miR-1266-3p 0 0 1
chr19:1108934|1109206 hsa-miR-1281 0 1 1
chr19:1108934|1109206 hsa-miR-1307-5p 0 0 1
chr19:1108934|1109206 hsa-miR-1307-3p 0 0 1
chr19:1108934|1109206 hsa-miR-1225-3p 0 1 1
chr19:1108934|1109206 hsa-miR-532-3p 0 0 1
chr19:1108934|1109206 hsa-miR-146b-3p 0 0 1
chr19:1108934|1109206 hsa-miR-671-3p 0 0 1
chr19:1108934|1109206 hsa-miR-483-5p 0 0 1
chr19:1108934|1109206 hsa-miR-331-3p 0 0 1
chr19:1108934|1109206 hsa-miR-125a-5p 0 1 1
chr19:1108934|1109206 hsa-miR-34c-5p 0 1 1
chr19:1108934|1109206 hsa-miR-886-5p 0 0 1
chr19:1108934|1109206 hsa-miR-125b 0 0 1
chr19:1108934|1109206 hsa-miR-24 0 0 1
chr19:1108934|1109206 hsa-miR-371-3p 0 0 1
chr19:1108934|1109206 hsa-miR-764 0 1 0
chr19:1108934|1109206 hsa-miR-1202 0 1 0
chr19:1108934|1109206 hsa-miR-1976 0 1 0
chr19:1108934|1109206 hsa-miR-718 1 0 0
chr19:1108934|1109206 hsa-miR-1273c 0 1 0
chr19:1108934|1109206 hsa-miR-3155a 0 1 0
chr19:1108934|1109206 hsa-miR-4313 1 0 0
chr19:1108934|1109206 hsa-miR-3621 0 1 0
chr19:1108934|1109206 hsa-miR-3943 0 1 0
chr19:1108934|1109206 hsa-miR-4448 0 1 0
chr19:1108934|1109206 hsa-miR-4449 1 1 0
chr19:1108934|1109206 hsa-miR-3155b 0 1 0
chr19:1108934|1109206 hsa-miR-4519 1 0 0
chr19:1108934|1109206 hsa-miR-4686 1 1 0
chr19:1108934|1109206 hsa-miR-4767 1 0 0
chr19:1108934|1109206 hsa-miR-7976 0 1 0
chr19:1108934|1109206 hsa-miR-9901 1 1 0
chr19:1108934|1109206 hsa-miR-4726-3p 1 1 0
chr19:1108934|1109206 hsa-miR-1915-5p 1 1 0
chr19:1108934|1109206 hsa-miR-4697-3p 1 0 0
chr19:1108934|1109206 hsa-miR-23a-5p 0 1 0
chr19:1108934|1109206 hsa-miR-4713-5p 0 1 0
chr19:1108934|1109206 hsa-miR-1343-3p 0 1 0
chr19:1108934|1109206 hsa-miR-615-5p 1 1 0
chr19:1108934|1109206 hsa-miR-6763-3p 1 1 0
chr19:1108934|1109206 hsa-miR-1909-5p 0 1 0
chr19:1108934|1109206 hsa-miR-4707-3p 1 1 0
chr19:1108934|1109206 hsa-miR-7113-3p 1 0 0
chr19:1108934|1109206 hsa-miR-6771-5p 0 1 0
chr19:1108934|1109206 hsa-miR-6878-3p 0 1 0
chr19:1108934|1109206 hsa-miR-6742-3p 0 1 0
chr19:1108934|1109206 hsa-miR-4640-3p 1 1 0
chr19:1108934|1109206 hsa-miR-4707-5p 1 0 0
chr19:1108934|1109206 hsa-miR-4638-5p 0 1 0
chr19:1108934|1109206 hsa-miR-1911-3p 0 1 0
chr19:1108934|1109206 hsa-miR-4746-3p 1 0 0
chr19:1108934|1109206 hsa-miR-3074-5p 0 1 0
chr19:1108934|1109206 hsa-miR-4746-5p 0 1 0
chr19:1108934|1109206 hsa-miR-6777-3p 0 1 0
chr19:1108934|1109206 hsa-miR-4639-3p 0 1 0
chr19:1108934|1109206 hsa-miR-6790-3p 1 0 0
chr19:1108934|1109206 hsa-miR-524-5p 0 1 0
chr19:1108934|1109206 hsa-miR-1915-3p 0 1 0
chr19:1108934|1109206 hsa-miR-6791-3p 0 1 0
chr19:1108934|1109206 hsa-miR-6724-5p 1 0 0
chr19:1108934|1109206 hsa-miR-769-3p 1 1 0
chr19:1108934|1109206 hsa-miR-9851-5p 1 1 0
chr19:1108934|1109206 hsa-miR-6511a-3p 0 1 0
chr19:1108934|1109206 hsa-miR-6862-3p 1 0 0
chr19:1108934|1109206 hsa-miR-10401-3p 1 0 0
chr19:1108934|1109206 hsa-miR-6805-3p 1 1 0
chr19:1108934|1109206 hsa-miR-6810-3p 1 0 0
chr19:1108934|1109206 hsa-miR-6829-3p 0 1 0
chr19:1108934|1109206 hsa-miR-6511b-3p 0 1 0
chr19:1108934|1109206 hsa-miR-6783-3p 1 0 0
chr19:1108934|1109206 hsa-miR-6848-3p 0 1 0
chr19:1108934|1109206 hsa-miR-6781-3p 0 1 0
chr19:1108934|1109206 hsa-miR-6764-5p 0 1 0
chr19:1108934|1109206 hsa-miR-125b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:1108934|1109206
ORF Type ORF1
Protein Length 82
Nucleotide Length 249
Protein Sequence MGEWLRFVADALQPQRLVRAGRGPGGNRQMAATQAGIGGSRDPERRREISGHLGSLRAPGTRLSRDDPSRPQEPALPAGAGG
Nucleotide Sequence CTGGGAGAGTGGCTACGCTTTGTCGCTGACGCACTGCAGCCACAGCGCCTGGTGAGGGCGGGCCGGGGACCAGGGGGAAACCGGCAGATGGCGGCGACCCAGGCGGGGATCGGGGGCTCCCGAGACCCTGAGAGGAGGCGGGAGATCTCAGGGCACCTGGGGAGCCTGCGGGCCCCTGGGACCCGCCTGAGCCGAGACGACCCGTCTCGTCCGCAGGAACCGGCACTGCCGGCTGGCGCAGGAGGGTAA
CircID chr19:1108934|1109206
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MGRRHLPVSPWSPARPHQALWLQCVSDKA
Nucleotide Sequence CTGGGTCGCCGCCATCTGCCGGTTTCCCCCTGGTCCCCGGCCCGCCCTCACCAGGCGCTGTGGCTGCAGTGCGTCAGCGACAAAGCGTAG
CircID chr19:1108934|1109206
ORF Type ORF3
Protein Length 87
Nucleotide Length 261
Protein Sequence MRQPAVPVPADETGRLGSGGSQGPAGSPGALRSPASSQGLGSPRSPPGSPPSAGFPLVPGPPSPGAVAAVRQRQSVATLPGLLGLLR
Nucleotide Sequence CTGCGCCAGCCGGCAGTGCCGGTTCCTGCGGACGAGACGGGTCGTCTCGGCTCAGGCGGGTCCCAGGGGCCCGCAGGCTCCCCAGGTGCCCTGAGATCTCCCGCCTCCTCTCAGGGTCTCGGGAGCCCCCGATCCCCGCCTGGGTCGCCGCCATCTGCCGGTTTCCCCCTGGTCCCCGGCCCGCCCTCACCAGGCGCTGTGGCTGCAGTGCGTCAGCGACAAAGCGTAGCCACTCTCCCAGGGCTCCTTGGCCTCCTCCGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab