CircRNA Information

General Information
circRNA Basic Information
CircID chr19:11365300|11365425
Strand +
CircType exon
Host Gene ENSG00000105520.9;
Algorism CIRI2;
Sequence CTGGGCACAGGCAAGGGGAGACACAGCACCCTGAACCCCAAAACCTCTGAAGTGGGGCAAGCCCTACTTAAGTAGGGGATTAGGAGAGAGTGGGTGAGAGGTGGAGAGGCCGCACACAGGGAGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:11365300|11365425 hsa-miR-562 0 0 1
chr19:11365300|11365425 hsa-miR-147b-5p 0 0 1
chr19:11365300|11365425 hsa-miR-147b-3p 0 0 1
chr19:11365300|11365425 hsa-miR-1229-5p 0 0 1
chr19:11365300|11365425 hsa-miR-1229-3p 0 0 1
chr19:11365300|11365425 hsa-miR-339-5p 0 0 1
chr19:11365300|11365425 hsa-miR-1274a 0 0 1
chr19:11365300|11365425 hsa-miR-1274b 0 0 1
chr19:11365300|11365425 hsa-miR-346 1 0 0
chr19:11365300|11365425 hsa-miR-1470 1 0 0
chr19:11365300|11365425 hsa-miR-3615 1 0 0
chr19:11365300|11365425 hsa-miR-5572 0 1 0
chr19:11365300|11365425 hsa-miR-7703 1 0 0
chr19:11365300|11365425 hsa-miR-12127 0 1 0
chr19:11365300|11365425 hsa-miR-197-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6836-3p 1 0 0
chr19:11365300|11365425 hsa-miR-7110-3p 1 1 0
chr19:11365300|11365425 hsa-miR-1915-5p 0 1 0
chr19:11365300|11365425 hsa-miR-6845-3p 1 1 0
chr19:11365300|11365425 hsa-miR-877-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6882-3p 1 0 0
chr19:11365300|11365425 hsa-miR-4713-5p 1 0 0
chr19:11365300|11365425 hsa-miR-4436b-5p 1 1 0
chr19:11365300|11365425 hsa-miR-6815-3p 1 0 0
chr19:11365300|11365425 hsa-miR-5010-3p 1 0 0
chr19:11365300|11365425 hsa-miR-7113-3p 1 1 0
chr19:11365300|11365425 hsa-miR-6878-3p 1 0 0
chr19:11365300|11365425 hsa-miR-7111-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6870-3p 1 0 0
chr19:11365300|11365425 hsa-miR-1236-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6743-3p 1 0 0
chr19:11365300|11365425 hsa-miR-3158-3p 0 1 0
chr19:11365300|11365425 hsa-miR-6867-3p 1 0 0
chr19:11365300|11365425 hsa-miR-1224-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6741-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6865-3p 1 0 0
chr19:11365300|11365425 hsa-miR-1914-5p 1 1 0
chr19:11365300|11365425 hsa-miR-6777-3p 1 1 0
chr19:11365300|11365425 hsa-miR-6794-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6802-3p 1 0 0
chr19:11365300|11365425 hsa-miR-4750-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6734-3p 1 0 0
chr19:11365300|11365425 hsa-miR-4639-3p 0 1 0
chr19:11365300|11365425 hsa-miR-329-5p 0 1 0
chr19:11365300|11365425 hsa-miR-6800-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6510-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6754-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6855-5p 1 1 0
chr19:11365300|11365425 hsa-miR-6511a-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6784-3p 1 1 0
chr19:11365300|11365425 hsa-miR-6792-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6862-3p 1 1 0
chr19:11365300|11365425 hsa-miR-4723-3p 1 1 0
chr19:11365300|11365425 hsa-miR-485-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6511b-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6769b-3p 1 1 0
chr19:11365300|11365425 hsa-miR-6744-3p 1 1 0
chr19:11365300|11365425 hsa-miR-4768-5p 0 1 0
chr19:11365300|11365425 hsa-miR-1234-3p 1 0 0
chr19:11365300|11365425 hsa-miR-6833-3p 1 0 0
chr19:11365300|11365425 hsa-miR-5195-3p 1 0 0
chr19:11365300|11365425 hsa-miR-412-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:11365300|11365425
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MCAASPPLTHSLLIPYLSRACPTSEVLGFRVLCLPLPVP
Nucleotide Sequence CTGTGTGCGGCCTCTCCACCTCTCACCCACTCTCTCCTAATCCCCTACTTAAGTAGGGCTTGCCCCACTTCAGAGGTTTTGGGGTTCAGGGTGCTGTGTCTCCCCTTGCCTGTGCCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites