CircNet

General Information

circRNA Basic Information

CircID	chr19:11835257\|11835433
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	TTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCTGTGAGGTGGAGCTTGCAGTGAGCCAAGATCGCGCCATTGCACTCCAACCTGGACGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGACTTGGCCTTGTGGTGAGGGGAGGGCATCTGTAAACTCCTGGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:11835257\|11835433	hsa-miR-197-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-197-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-122-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-122-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-130a-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-130a-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-143-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-143-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-150-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-150-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-301a-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-301a-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-130b-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-130b-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-377-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-377-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-431-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-431-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-652-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-652-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-1264	0	0	1
chr19:11835257\|11835433	hsa-miR-454-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-454-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-665	1	1	1
chr19:11835257\|11835433	hsa-miR-301b-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-301b-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-924	0	1	1
chr19:11835257\|11835433	hsa-miR-1228-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-1228-3p	0	0	1
chr19:11835257\|11835433	hsa-miR-129-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-1289	0	0	1
chr19:11835257\|11835433	hsa-miR-513a-5p	0	0	1
chr19:11835257\|11835433	hsa-miR-220b	0	0	1
chr19:11835257\|11835433	hsa-miR-220c	0	0	1
chr19:11835257\|11835433	hsa-miR-24	0	0	1
chr19:11835257\|11835433	hsa-miR-220a	0	0	1
chr19:11835257\|11835433	hsa-miR-657	1	1	0
chr19:11835257\|11835433	hsa-miR-1303	0	1	0
chr19:11835257\|11835433	hsa-miR-4290	0	1	0
chr19:11835257\|11835433	hsa-miR-3918	1	0	0
chr19:11835257\|11835433	hsa-miR-5572	1	1	0
chr19:11835257\|11835433	hsa-miR-5683	0	1	0
chr19:11835257\|11835433	hsa-miR-504-3p	1	1	0
chr19:11835257\|11835433	hsa-miR-6747-3p	0	1	0
chr19:11835257\|11835433	hsa-miR-6765-5p	1	0	0
chr19:11835257\|11835433	hsa-miR-2467-3p	1	0	0
chr19:11835257\|11835433	hsa-miR-6772-3p	1	0	0
chr19:11835257\|11835433	hsa-miR-7161-3p	0	1	0
chr19:11835257\|11835433	hsa-miR-6809-3p	1	1	0
chr19:11835257\|11835433	hsa-miR-6739-3p	1	0	0
chr19:11835257\|11835433	hsa-miR-1304-3p	0	1	0
chr19:11835257\|11835433	hsa-miR-6777-3p	1	0	0
chr19:11835257\|11835433	hsa-miR-1229-3p	1	0	0
chr19:11835257\|11835433	hsa-miR-1909-3p	1	0	0
chr19:11835257\|11835433	hsa-miR-6511a-3p	1	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:11835257\|11835433
ORF Type	ORF1
Protein Length	35
Nucleotide Length	105
Protein Sequence	MHSNLDDRARLHLKKKKKKKKTWPCGEGRASVNSW
Nucleotide Sequence	TTGCACTCCAACCTGGACGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGACTTGGCCTTGTGGTGAGGGGAGGGCATCTGTAAACTCCTGG

CircID	chr19:11835257\|11835433
ORF Type	ORF2
Protein Length	37
Nucleotide Length	111
Protein Sequence	MRWSLALSSRLECNGAILAHCKLHLTGSHHSPASASQ
Nucleotide Sequence	TTGAGATGGAGTCTTGCTCTGTCGTCCAGGTTGGAGTGCAATGGCGCGATCTTGGCTCACTGCAAGCTCCACCTCACAGGTTCACACCATTCTCCTGCCTCAGCCTCCCAA

CircID	chr19:11835257\|11835433
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MLCRPGWSAMARSWLTASSTSQVHTILLPQPP
Nucleotide Sequence	TTGCTCTGTCGTCCAGGTTGGAGTGCAATGGCGCGATCTTGGCTCACTGCAAGCTCCACCTCACAGGTTCACACCATTCTCCTGCCTCAGCCTCCC

CircID	chr19:11835257\|11835433
ORF Type	ORF4
Protein Length	35
Nucleotide Length	105
Protein Sequence	MESCSVVQVGVQWRDLGSLQAPPHRFTPFSCLSLP
Nucleotide Sequence	ATGGAGTCTTGCTCTGTCGTCCAGGTTGGAGTGCAATGGCGCGATCTTGGCTCACTGCAAGCTCCACCTCACAGGTTCACACCATTCTCCTGCCTCAGCCTCCCA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information