CircRNA Information

General Information
circRNA Basic Information
CircID chr19:1244377|1244773
Strand -
CircType exon
Host Gene ENSG00000099624.6;
Algorism CIRI2;
Sequence GCGGGCAGAGATCCAGATCCGAATCGAGGCCAACGAGGCCCTGGTGAAGGCCCTGGAGTAGGCGGTGCGTACCCGGTGTCCCGAGGCCCGGCCAGGGGCTGGGCAGGGATGCCAGGTGGGCCCAGCCAGCTCCTGGGGTCCCGGCCACCTGGGGAAGCCGCGCCTGCCAAGGAGGCCACCAGAGGGCAGTGCAGGCTTCTGCCTGGGCCCCAGGCCCTGCCTGTGTTGAAAGCTCTGGGGACTGGGCCAGGGAAGCTCCTCCTCAGCTTTGAGCTGTGGCTGCCACCCATGGGGCTCTCCTTCCGCCTCTCAAGATCCCCCCAGCCTGACGGGCCGCTTACCATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:1244377|1244773 hsa-miR-197-5p 0 0 1
chr19:1244377|1244773 hsa-miR-197-3p 0 0 1
chr19:1244377|1244773 hsa-miR-149-5p 0 0 1
chr19:1244377|1244773 hsa-miR-149-3p 0 0 1
chr19:1244377|1244773 hsa-miR-320a-5p 0 0 1
chr19:1244377|1244773 hsa-miR-320a-3p 0 0 1
chr19:1244377|1244773 hsa-miR-412-5p 0 0 1
chr19:1244377|1244773 hsa-miR-412-3p 0 0 1
chr19:1244377|1244773 hsa-miR-484 0 0 1
chr19:1244377|1244773 hsa-miR-526b-5p 0 0 1
chr19:1244377|1244773 hsa-miR-526b-3p 0 0 1
chr19:1244377|1244773 hsa-miR-596 0 1 1
chr19:1244377|1244773 hsa-miR-637 1 0 1
chr19:1244377|1244773 hsa-miR-661 1 1 1
chr19:1244377|1244773 hsa-miR-421 0 0 1
chr19:1244377|1244773 hsa-miR-765 0 0 1
chr19:1244377|1244773 hsa-miR-298 0 1 1
chr19:1244377|1244773 hsa-miR-708-5p 0 0 1
chr19:1244377|1244773 hsa-miR-708-3p 0 0 1
chr19:1244377|1244773 hsa-miR-665 1 1 1
chr19:1244377|1244773 hsa-miR-760 1 1 1
chr19:1244377|1244773 hsa-miR-940 0 1 1
chr19:1244377|1244773 hsa-miR-1226-5p 0 0 1
chr19:1244377|1244773 hsa-miR-1226-3p 0 0 1
chr19:1244377|1244773 hsa-miR-1205 0 0 1
chr19:1244377|1244773 hsa-miR-1293 0 0 1
chr19:1244377|1244773 hsa-miR-1305 0 0 1
chr19:1244377|1244773 hsa-miR-1306-5p 0 0 1
chr19:1244377|1244773 hsa-miR-1306-3p 0 0 1
chr19:1244377|1244773 hsa-miR-1225-3p 0 1 1
chr19:1244377|1244773 hsa-miR-296-5p 0 0 1
chr19:1244377|1244773 hsa-miR-127-3p 0 0 1
chr19:1244377|1244773 hsa-miR-885-3p 0 0 1
chr19:1244377|1244773 hsa-miR-324-5p 0 1 1
chr19:1244377|1244773 hsa-miR-1184 0 0 1
chr19:1244377|1244773 hsa-miR-330-3p 0 0 1
chr19:1244377|1244773 hsa-miR-508-5p 0 1 1
chr19:1244377|1244773 hsa-miR-1224-3p 0 1 1
chr19:1244377|1244773 hsa-miR-28-5p 0 0 1
chr19:1244377|1244773 hsa-miR-331-3p 0 0 1
chr19:1244377|1244773 hsa-miR-1207-5p 1 1 1
chr19:1244377|1244773 hsa-miR-324-3p 0 0 1
chr19:1244377|1244773 hsa-miR-320b 0 1 1
chr19:1244377|1244773 hsa-miR-320c 0 1 1
chr19:1244377|1244773 hsa-miR-320d 0 1 1
chr19:1244377|1244773 hsa-miR-521 0 0 1
chr19:1244377|1244773 hsa-miR-1274a 0 0 1
chr19:1244377|1244773 hsa-miR-1308 0 0 1
chr19:1244377|1244773 hsa-miR-608 1 0 0
chr19:1244377|1244773 hsa-miR-638 1 0 0
chr19:1244377|1244773 hsa-miR-663a 1 0 0
chr19:1244377|1244773 hsa-miR-658 1 1 0
chr19:1244377|1244773 hsa-miR-762 1 0 0
chr19:1244377|1244773 hsa-miR-1182 1 0 0
chr19:1244377|1244773 hsa-miR-1183 1 0 0
chr19:1244377|1244773 hsa-miR-663b 1 0 0
chr19:1244377|1244773 hsa-miR-1204 0 1 0
chr19:1244377|1244773 hsa-miR-1469 1 0 0
chr19:1244377|1244773 hsa-miR-1538 1 0 0
chr19:1244377|1244773 hsa-miR-2861 0 1 0
chr19:1244377|1244773 hsa-miR-3135a 0 1 0
chr19:1244377|1244773 hsa-miR-3147 1 0 0
chr19:1244377|1244773 hsa-miR-1193 0 1 0
chr19:1244377|1244773 hsa-miR-4292 1 0 0
chr19:1244377|1244773 hsa-miR-3665 1 0 0
chr19:1244377|1244773 hsa-miR-3918 0 1 0
chr19:1244377|1244773 hsa-miR-3937 1 0 0
chr19:1244377|1244773 hsa-miR-4429 0 1 0
chr19:1244377|1244773 hsa-miR-4449 1 0 0
chr19:1244377|1244773 hsa-miR-4450 1 1 0
chr19:1244377|1244773 hsa-miR-4456 0 1 0
chr19:1244377|1244773 hsa-miR-4484 1 0 0
chr19:1244377|1244773 hsa-miR-4487 0 1 0
chr19:1244377|1244773 hsa-miR-4505 1 1 0
chr19:1244377|1244773 hsa-miR-2392 1 0 0
chr19:1244377|1244773 hsa-miR-4512 0 1 0
chr19:1244377|1244773 hsa-miR-4514 0 1 0
chr19:1244377|1244773 hsa-miR-4533 0 1 0
chr19:1244377|1244773 hsa-miR-4642 0 1 0
chr19:1244377|1244773 hsa-miR-4651 1 0 0
chr19:1244377|1244773 hsa-miR-4654 1 0 0
chr19:1244377|1244773 hsa-miR-4656 1 0 0
chr19:1244377|1244773 hsa-miR-4673 0 1 0
chr19:1244377|1244773 hsa-miR-4689 1 0 0
chr19:1244377|1244773 hsa-miR-4692 0 1 0
chr19:1244377|1244773 hsa-miR-4734 1 0 0
chr19:1244377|1244773 hsa-miR-4739 1 0 0
chr19:1244377|1244773 hsa-miR-4741 1 0 0
chr19:1244377|1244773 hsa-miR-4767 1 0 0
chr19:1244377|1244773 hsa-miR-5090 1 0 0
chr19:1244377|1244773 hsa-miR-5787 1 1 0
chr19:1244377|1244773 hsa-miR-6125 0 1 0
chr19:1244377|1244773 hsa-miR-6132 1 1 0
chr19:1244377|1244773 hsa-miR-6860 1 0 0
chr19:1244377|1244773 hsa-miR-7703 1 0 0
chr19:1244377|1244773 hsa-miR-8057 0 1 0
chr19:1244377|1244773 hsa-miR-8072 1 0 0
chr19:1244377|1244773 hsa-miR-8089 1 0 0
chr19:1244377|1244773 hsa-miR-12115 1 0 0
chr19:1244377|1244773 hsa-miR-18a-3p 0 1 0
chr19:1244377|1244773 hsa-miR-6734-5p 1 0 0
chr19:1244377|1244773 hsa-miR-4731-5p 1 1 0
chr19:1244377|1244773 hsa-miR-6840-3p 0 1 0
chr19:1244377|1244773 hsa-miR-3194-3p 0 1 0
chr19:1244377|1244773 hsa-miR-6765-5p 1 0 0
chr19:1244377|1244773 hsa-miR-3150a-3p 1 0 0
chr19:1244377|1244773 hsa-miR-6861-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6825-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6728-5p 1 0 0
chr19:1244377|1244773 hsa-miR-1227-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6757-5p 1 0 0
chr19:1244377|1244773 hsa-miR-4722-5p 0 1 0
chr19:1244377|1244773 hsa-miR-7160-5p 1 1 0
chr19:1244377|1244773 hsa-miR-6727-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6842-3p 1 1 0
chr19:1244377|1244773 hsa-miR-8069 1 0 0
chr19:1244377|1244773 hsa-miR-3189-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6768-5p 0 1 0
chr19:1244377|1244773 hsa-miR-3180-3p 1 0 0
chr19:1244377|1244773 hsa-miR-4655-3p 1 0 0
chr19:1244377|1244773 hsa-miR-6732-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6798-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6782-5p 1 0 0
chr19:1244377|1244773 hsa-miR-4793-3p 0 1 0
chr19:1244377|1244773 hsa-miR-6765-3p 0 1 0
chr19:1244377|1244773 hsa-miR-3194-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6852-5p 0 1 0
chr19:1244377|1244773 hsa-miR-7109-5p 1 0 0
chr19:1244377|1244773 hsa-miR-4763-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6753-5p 1 1 0
chr19:1244377|1244773 hsa-miR-4691-3p 0 1 0
chr19:1244377|1244773 hsa-miR-3127-5p 0 1 0
chr19:1244377|1244773 hsa-miR-5580-5p 0 1 0
chr19:1244377|1244773 hsa-miR-7113-3p 0 1 0
chr19:1244377|1244773 hsa-miR-4690-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6749-5p 1 1 0
chr19:1244377|1244773 hsa-miR-6501-5p 1 0 0
chr19:1244377|1244773 hsa-miR-4787-5p 1 0 0
chr19:1244377|1244773 hsa-miR-4446-5p 0 1 0
chr19:1244377|1244773 hsa-miR-4446-3p 1 0 0
chr19:1244377|1244773 hsa-miR-4733-3p 0 1 0
chr19:1244377|1244773 hsa-miR-6789-5p 1 0 0
chr19:1244377|1244773 hsa-miR-7156-3p 1 0 0
chr19:1244377|1244773 hsa-miR-7843-3p 0 1 0
chr19:1244377|1244773 hsa-miR-5010-5p 0 1 0
chr19:1244377|1244773 hsa-miR-7112-5p 0 1 0
chr19:1244377|1244773 hsa-miR-4707-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6813-3p 1 1 0
chr19:1244377|1244773 hsa-miR-744-5p 1 0 0
chr19:1244377|1244773 hsa-miR-2276-5p 0 1 0
chr19:1244377|1244773 hsa-miR-2355-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6770-3p 0 1 0
chr19:1244377|1244773 hsa-miR-10400-5p 1 0 0
chr19:1244377|1244773 hsa-miR-1233-5p 1 0 0
chr19:1244377|1244773 hsa-miR-4763-3p 1 1 0
chr19:1244377|1244773 hsa-miR-6787-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6812-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6865-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6775-5p 1 1 0
chr19:1244377|1244773 hsa-miR-1343-5p 1 0 0
chr19:1244377|1244773 hsa-miR-5001-5p 1 1 0
chr19:1244377|1244773 hsa-miR-6726-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6737-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6743-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6752-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6756-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6803-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6813-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6815-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6819-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6842-5p 1 0 0
chr19:1244377|1244773 hsa-miR-7107-5p 1 1 0
chr19:1244377|1244773 hsa-miR-7110-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6722-3p 1 0 0
chr19:1244377|1244773 hsa-miR-6751-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6774-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6808-5p 1 1 0
chr19:1244377|1244773 hsa-miR-6879-5p 1 1 0
chr19:1244377|1244773 hsa-miR-7111-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6754-3p 0 1 0
chr19:1244377|1244773 hsa-miR-1915-3p 1 0 0
chr19:1244377|1244773 hsa-miR-6836-5p 1 1 0
chr19:1244377|1244773 hsa-miR-10392-5p 1 0 0
chr19:1244377|1244773 hsa-miR-10396a-5p 1 0 0
chr19:1244377|1244773 hsa-miR-328-5p 1 0 0
chr19:1244377|1244773 hsa-miR-4632-5p 1 1 0
chr19:1244377|1244773 hsa-miR-4685-5p 1 1 0
chr19:1244377|1244773 hsa-miR-4725-3p 1 0 0
chr19:1244377|1244773 hsa-miR-6735-5p 1 1 0
chr19:1244377|1244773 hsa-miR-6795-5p 1 1 0
chr19:1244377|1244773 hsa-miR-6846-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6848-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6858-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6887-5p 1 1 0
chr19:1244377|1244773 hsa-miR-3187-5p 1 0 0
chr19:1244377|1244773 hsa-miR-4723-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6885-5p 1 0 0
chr19:1244377|1244773 hsa-miR-939-5p 1 0 0
chr19:1244377|1244773 hsa-miR-1910-3p 0 1 0
chr19:1244377|1244773 hsa-miR-6511a-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6511b-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6773-5p 0 1 0
chr19:1244377|1244773 hsa-miR-7843-5p 0 1 0
chr19:1244377|1244773 hsa-miR-1914-3p 1 0 0
chr19:1244377|1244773 hsa-miR-4665-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6791-3p 1 1 0
chr19:1244377|1244773 hsa-miR-6766-5p 1 0 0
chr19:1244377|1244773 hsa-miR-4667-5p 1 0 0
chr19:1244377|1244773 hsa-miR-6724-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6791-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6829-3p 0 1 0
chr19:1244377|1244773 hsa-miR-6837-5p 0 1 0
chr19:1244377|1244773 hsa-miR-6775-3p 1 0 0
chr19:1244377|1244773 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:1244377|1244773
ORF Type ORF1
Protein Length 96
Nucleotide Length 288
Protein Sequence MPGGPSQLLGSRPPGEAAPAKEATRGQCRLLPGPQALPVLKALGTGPGKLLLSFELWLPPMGLSFRLSRSPQPDGPLTIPSALQSQPPRLTSASEP
Nucleotide Sequence ATGCCAGGTGGGCCCAGCCAGCTCCTGGGGTCCCGGCCACCTGGGGAAGCCGCGCCTGCCAAGGAGGCCACCAGAGGGCAGTGCAGGCTTCTGCCTGGGCCCCAGGCCCTGCCTGTGTTGAAAGCTCTGGGGACTGGGCCAGGGAAGCTCCTCCTCAGCTTTGAGCTGTGGCTGCCACCCATGGGGCTCTCCTTCCGCCTCTCAAGATCCCCCCAGCCTGACGGGCCGCTTACCATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGACCTCAGCTTCGGAGCCA
CircID chr19:1244377|1244773
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MGKPRLPRRPPEGSAGFCLGPRPCLC
Nucleotide Sequence CTGGGGAAGCCGCGCCTGCCAAGGAGGCCACCAGAGGGCAGTGCAGGCTTCTGCCTGGGCCCCAGGCCCTGCCTGTGTTGA
CircID chr19:1244377|1244773
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MGQGSSSSALSCGCHPWGSPSASQDPPSLTGRLPSPLPCRASRQG
Nucleotide Sequence CTGGGCCAGGGAAGCTCCTCCTCAGCTTTGAGCTGTGGCTGCCACCCATGGGGCTCTCCTTCCGCCTCTCAAGATCCCCCCAGCCTGACGGGCCGCTTACCATCCCCTCTGCCCTGCAGAGCCAGCCGCCAAGGTTGA
CircID chr19:1244377|1244773
ORF Type ORF4
Protein Length 57
Nucleotide Length 174
Protein Sequence MGRDARWAQPAPGVPATWGSRACQGGHQRAVQASAWAPGPACVESSGDWAREAPPQL
Nucleotide Sequence CTGGGCAGGGATGCCAGGTGGGCCCAGCCAGCTCCTGGGGTCCCGGCCACCTGGGGAAGCCGCGCCTGCCAAGGAGGCCACCAGAGGGCAGTGCAGGCTTCTGCCTGGGCCCCAGGCCCTGCCTGTGTTGAAAGCTCTGGGGACTGGGCCAGGGAAGCTCCTCCTCAGCTTTGA
CircID chr19:1244377|1244773
ORF Type ORF5
Protein Length 83
Nucleotide Length 249
Protein Sequence MAQSPELSTQAGPGAQAEACTALWWPPWQARLPQVAGTPGAGWAHLASLPSPWPGLGTPGTHRLLQGLHQGLVGLDSDLDLCP
Nucleotide Sequence CTGGCCCAGTCCCCAGAGCTTTCAACACAGGCAGGGCCTGGGGCCCAGGCAGAAGCCTGCACTGCCCTCTGGTGGCCTCCTTGGCAGGCGCGGCTTCCCCAGGTGGCCGGGACCCCAGGAGCTGGCTGGGCCCACCTGGCATCCCTGCCCAGCCCCTGGCCGGGCCTCGGGACACCGGGTACGCACCGCCTACTCCAGGGCCTTCACCAGGGCCTCGTTGGCCTCGATTCGGATCTGGATCTCTGCCCG
CircID chr19:1244377|1244773
ORF Type ORF6
Protein Length 71
Nucleotide Length 213
Protein Sequence MGPRQKPALPSGGLLGRRGFPRWPGPQELAGPTWHPCPAPGRASGHRVRTAYSRAFTRASLASIRIWISAR
Nucleotide Sequence CTGGGGCCCAGGCAGAAGCCTGCACTGCCCTCTGGTGGCCTCCTTGGCAGGCGCGGCTTCCCCAGGTGGCCGGGACCCCAGGAGCTGGCTGGGCCCACCTGGCATCCCTGCCCAGCCCCTGGCCGGGCCTCGGGACACCGGGTACGCACCGCCTACTCCAGGGCCTTCACCAGGGCCTCGTTGGCCTCGATTCGGATCTGGATCTCTGCCCGC
CircID chr19:1244377|1244773
ORF Type ORF7
Protein Length 114
Nucleotide Length 342
Protein Sequence MVSGPSGWGDLERRKESPMGGSHSSKLRRSFPGPVPRAFNTGRAWGPGRSLHCPLVASLAGAASPGGRDPRSWLGPPGIPAQPLAGPRDTGYAPPTPGPSPGPRWPRFGSGSLP
Nucleotide Sequence ATGGTAAGCGGCCCGTCAGGCTGGGGGGATCTTGAGAGGCGGAAGGAGAGCCCCATGGGTGGCAGCCACAGCTCAAAGCTGAGGAGGAGCTTCCCTGGCCCAGTCCCCAGAGCTTTCAACACAGGCAGGGCCTGGGGCCCAGGCAGAAGCCTGCACTGCCCTCTGGTGGCCTCCTTGGCAGGCGCGGCTTCCCCAGGTGGCCGGGACCCCAGGAGCTGGCTGGGCCCACCTGGCATCCCTGCCCAGCCCCTGGCCGGGCCTCGGGACACCGGGTACGCACCGCCTACTCCAGGGCCTTCACCAGGGCCTCGTTGGCCTCGATTCGGATCTGGATCTCTGCCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab