CircRNA Information

General Information
circRNA Basic Information
CircID chr19:1274329|1274618
Strand -
CircType exon
Host Gene ENSG00000099622.12;
Algorism CIRI2;
Sequence TCGGGGAAGGGTGGCCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTGGAGCCCGCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:1274329|1274618 hsa-miR-600 0 1 1
chr19:1274329|1274618 hsa-miR-612 1 1 1
chr19:1274329|1274618 hsa-miR-639 0 0 1
chr19:1274329|1274618 hsa-miR-766-5p 0 0 1
chr19:1274329|1274618 hsa-miR-766-3p 0 0 1
chr19:1274329|1274618 hsa-miR-675-5p 0 0 1
chr19:1274329|1274618 hsa-miR-675-3p 0 0 1
chr19:1274329|1274618 hsa-miR-874-5p 0 0 1
chr19:1274329|1274618 hsa-miR-874-3p 0 0 1
chr19:1274329|1274618 hsa-miR-1236-5p 0 0 1
chr19:1274329|1274618 hsa-miR-1236-3p 0 0 1
chr19:1274329|1274618 hsa-miR-1286 0 0 1
chr19:1274329|1274618 hsa-miR-1266-5p 0 0 1
chr19:1274329|1274618 hsa-miR-1266-3p 0 0 1
chr19:1274329|1274618 hsa-miR-125a-3p 1 1 1
chr19:1274329|1274618 hsa-miR-146b-3p 0 0 1
chr19:1274329|1274618 hsa-miR-941 0 0 1
chr19:1274329|1274618 hsa-miR-1302 0 0 1
chr19:1274329|1274618 hsa-miR-524-3p 0 1 1
chr19:1274329|1274618 hsa-miR-525-3p 0 1 1
chr19:1274329|1274618 hsa-miR-362-3p 0 0 1
chr19:1274329|1274618 hsa-miR-1285 0 0 1
chr19:1274329|1274618 hsa-miR-24 0 0 1
chr19:1274329|1274618 hsa-miR-329 0 0 1
chr19:1274329|1274618 hsa-miR-220a 0 0 1
chr19:1274329|1274618 hsa-miR-663 0 0 1
chr19:1274329|1274618 hsa-miR-663a 1 1 0
chr19:1274329|1274618 hsa-miR-762 1 0 0
chr19:1274329|1274618 hsa-miR-940 1 0 0
chr19:1274329|1274618 hsa-miR-1538 1 0 0
chr19:1274329|1274618 hsa-miR-2278 1 0 0
chr19:1274329|1274618 hsa-miR-3937 1 1 0
chr19:1274329|1274618 hsa-miR-4437 0 1 0
chr19:1274329|1274618 hsa-miR-4466 1 1 0
chr19:1274329|1274618 hsa-miR-4489 1 0 0
chr19:1274329|1274618 hsa-miR-4523 1 0 0
chr19:1274329|1274618 hsa-miR-4706 1 0 0
chr19:1274329|1274618 hsa-miR-4721 1 0 0
chr19:1274329|1274618 hsa-miR-5192 1 0 0
chr19:1274329|1274618 hsa-miR-6860 1 1 0
chr19:1274329|1274618 hsa-miR-8085 1 1 0
chr19:1274329|1274618 hsa-miR-4433b-3p 1 0 0
chr19:1274329|1274618 hsa-miR-1247-3p 0 1 0
chr19:1274329|1274618 hsa-miR-4726-3p 0 1 0
chr19:1274329|1274618 hsa-miR-6861-5p 1 1 0
chr19:1274329|1274618 hsa-miR-6746-5p 1 0 0
chr19:1274329|1274618 hsa-miR-6890-5p 1 0 0
chr19:1274329|1274618 hsa-miR-24-3p 0 1 0
chr19:1274329|1274618 hsa-miR-6762-3p 1 0 0
chr19:1274329|1274618 hsa-miR-6727-5p 1 0 0
chr19:1274329|1274618 hsa-miR-6721-5p 0 1 0
chr19:1274329|1274618 hsa-miR-3130-3p 0 1 0
chr19:1274329|1274618 hsa-miR-6782-5p 1 0 0
chr19:1274329|1274618 hsa-miR-6882-3p 1 1 0
chr19:1274329|1274618 hsa-miR-1343-3p 0 1 0
chr19:1274329|1274618 hsa-miR-6786-5p 1 0 0
chr19:1274329|1274618 hsa-miR-5088-5p 0 1 0
chr19:1274329|1274618 hsa-miR-1226-5p 1 0 0
chr19:1274329|1274618 hsa-miR-1908-5p 0 1 0
chr19:1274329|1274618 hsa-miR-92b-5p 0 1 0
chr19:1274329|1274618 hsa-miR-1304-3p 0 1 0
chr19:1274329|1274618 hsa-miR-6789-5p 1 0 0
chr19:1274329|1274618 hsa-miR-3925-3p 0 1 0
chr19:1274329|1274618 hsa-miR-660-3p 0 1 0
chr19:1274329|1274618 hsa-miR-2114-5p 0 1 0
chr19:1274329|1274618 hsa-miR-508-5p 0 1 0
chr19:1274329|1274618 hsa-miR-208a-5p 0 1 0
chr19:1274329|1274618 hsa-miR-6741-3p 1 0 0
chr19:1274329|1274618 hsa-miR-2277-5p 0 1 0
chr19:1274329|1274618 hsa-miR-6767-3p 1 1 0
chr19:1274329|1274618 hsa-miR-1233-5p 1 1 0
chr19:1274329|1274618 hsa-miR-4763-3p 1 0 0
chr19:1274329|1274618 hsa-miR-6778-5p 1 1 0
chr19:1274329|1274618 hsa-miR-6787-5p 0 1 0
chr19:1274329|1274618 hsa-miR-6812-5p 1 0 0
chr19:1274329|1274618 hsa-miR-1343-5p 1 0 0
chr19:1274329|1274618 hsa-miR-6774-5p 0 1 0
chr19:1274329|1274618 hsa-miR-6797-5p 1 0 0
chr19:1274329|1274618 hsa-miR-5189-5p 0 1 0
chr19:1274329|1274618 hsa-miR-10396b-5p 1 1 0
chr19:1274329|1274618 hsa-miR-4649-5p 1 1 0
chr19:1274329|1274618 hsa-miR-3187-5p 0 1 0
chr19:1274329|1274618 hsa-miR-4697-5p 1 0 0
chr19:1274329|1274618 hsa-miR-6885-5p 0 1 0
chr19:1274329|1274618 hsa-miR-6731-5p 1 1 0
chr19:1274329|1274618 hsa-miR-6799-3p 0 1 0
chr19:1274329|1274618 hsa-miR-6791-3p 0 1 0
chr19:1274329|1274618 hsa-miR-6762-5p 1 1 0
chr19:1274329|1274618 hsa-miR-6829-3p 1 0 0
chr19:1274329|1274618 hsa-miR-6783-3p 0 1 0
chr19:1274329|1274618 hsa-miR-7973 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:1274329|1274618
ORF Type ORF1
Protein Length 55
Nucleotide Length 168
Protein Sequence MRAAMTSGVTVPGGTSPGTRAGGSRLPRRLVPCKCFREEWHVALSPVPGGTWAFQ
Nucleotide Sequence CTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGTGA
CircID chr19:1274329|1274618
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MLSRTYGPMAGAFRCVLGAGQRLPGAPGPPPGAR
Nucleotide Sequence CTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTGGAGCCCGC
CircID chr19:1274329|1274618
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MGSLSQEGLHLEQELEAAACPGGLSPVSAFGKSGMWR
Nucleotide Sequence CTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGA
CircID chr19:1274329|1274618
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MSRAAPGRFSESCSPAPMAPWRAPFGVCWVQGSASRERRVPRLEPA
Nucleotide Sequence CTGTCCCGGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTGGAGCCCGCG
CircID chr19:1274329|1274618
ORF Type ORF5
Protein Length 41
Nucleotide Length 123
Protein Sequence MGVSVSPALPHLWPHGGRLSVCVGCRAAPPGSAGSPAWSPR
Nucleotide Sequence CTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTGGAGCCCGCGC
CircID chr19:1274329|1274618
ORF Type ORF6
Protein Length 32
Nucleotide Length 96
Protein Sequence MGKRLPPALVPGEVPPGTVTPEVIAALRPPFP
Nucleotide Sequence CTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCAGGCCACCCTTCCCC
CircID chr19:1274329|1274618
ORF Type ORF7
Protein Length 67
Nucleotide Length 204
Protein Sequence MHPTHTERRPPWGHRCGRAGLTETPRCRPGQGSAPHATLPESTYRGQASWASGCLQLLFQVKSLLGQ
Nucleotide Sequence CTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGCCCAGGTGCCGCCCGGGACAGGGCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGA
CircID chr19:1274329|1274618
ORF Type ORF8
Protein Length 62
Nucleotide Length 189
Protein Sequence MPCTQHTPKGARHGAIGAGEQDSLKRPGAARDRAQRHMPLFPKALTGDKPPGQAAASSSCSR
Nucleotide Sequence CTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGCCCAGGTGCCGCCCGGGACAGGGCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab