CircNet

General Information

circRNA Basic Information

CircID	chr19:12902289\|12902421
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	TCCTCACCCTGCTGCCTTGGCCTCTAGTAGAAAAGATACAAAAACATTTATTTATTTATTTATTTATTTTGATACAGCACCCAGAGGCCACTTTGTTGGATGCCTCTTCTATTCTGTGTACTTTCTTCCTAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:12902289\|12902421	hsa-miR-214-5p	0	0	1
chr19:12902289\|12902421	hsa-miR-214-3p	0	0	1
chr19:12902289\|12902421	hsa-miR-326	0	0	1
chr19:12902289\|12902421	hsa-miR-520g-5p	0	0	1
chr19:12902289\|12902421	hsa-miR-520g-3p	0	0	1
chr19:12902289\|12902421	hsa-miR-520h	0	0	1
chr19:12902289\|12902421	hsa-miR-548k	0	0	1
chr19:12902289\|12902421	hsa-miR-1258	0	0	1
chr19:12902289\|12902421	hsa-miR-28-3p	0	0	1
chr19:12902289\|12902421	hsa-miR-330-5p	0	1	1
chr19:12902289\|12902421	hsa-miR-761	0	1	0
chr19:12902289\|12902421	hsa-miR-3714	0	1	0
chr19:12902289\|12902421	hsa-miR-4672	0	1	0
chr19:12902289\|12902421	hsa-miR-8054	0	1	0
chr19:12902289\|12902421	hsa-miR-1227-5p	1	0	0
chr19:12902289\|12902421	hsa-miR-6089	1	1	0
chr19:12902289\|12902421	hsa-miR-6746-5p	1	0	0
chr19:12902289\|12902421	hsa-miR-6741-5p	0	1	0
chr19:12902289\|12902421	hsa-miR-6776-5p	0	1	0
chr19:12902289\|12902421	hsa-miR-6760-5p	1	0	0
chr19:12902289\|12902421	hsa-miR-5006-5p	1	0	0
chr19:12902289\|12902421	hsa-miR-3186-5p	0	1	0
chr19:12902289\|12902421	hsa-miR-885-3p	0	1	0
chr19:12902289\|12902421	hsa-miR-877-5p	1	0	0
chr19:12902289\|12902421	hsa-miR-3065-5p	0	1	0
chr19:12902289\|12902421	hsa-miR-216a-3p	1	0	0
chr19:12902289\|12902421	hsa-miR-4632-5p	0	1	0
chr19:12902289\|12902421	hsa-miR-3173-3p	1	0	0
chr19:12902289\|12902421	hsa-miR-6762-5p	1	1	0
chr19:12902289\|12902421	hsa-miR-6837-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:12902289\|12902421
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	MASSRKDTKTFIYLFIYFDTAPRGHFVGCLFYSVYFLPN
Nucleotide Sequence	TTGGCCTCTAGTAGAAAAGATACAAAAACATTTATTTATTTATTTATTTATTTTGATACAGCACCCAGAGGCCACTTTGTTGGATGCCTCTTCTATTCTGTGTACTTTCTTCCTAAC

CircID	chr19:12902289\|12902421
ORF Type	ORF2
Protein Length	41
Nucleotide Length	123
Protein Sequence	MLPWPLVEKIQKHLFIYLFILIQHPEATLLDASSILCTFFL
Nucleotide Sequence	CTGCTGCCTTGGCCTCTAGTAGAAAAGATACAAAAACATTTATTTATTTATTTATTTATTTTGATACAGCACCCAGAGGCCACTTTGTTGGATGCCTCTTCTATTCTGTGTACTTTCTTCCTA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information