CircNet

General Information

circRNA Basic Information

CircID	chr19:12940343\|12940452
Strand	+
CircType	exon
Host Gene	ENSG00000179218.12;
Algorism	CIRI2;
Sequence	CTCAGGCTTGGAGTCTGTGGGATCATCGATCTTGGCCCGCTCATCCCAGTCTTCCGGTTTTGAAGCATCAGGATCCTTTATCTTCTTGGGTGGCAGGAAGTCCCAATCGT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:12940343\|12940452	hsa-miR-577	0	0	1
chr19:12940343\|12940452	hsa-miR-617	0	1	1
chr19:12940343\|12940452	hsa-miR-1323	0	0	1
chr19:12940343\|12940452	hsa-miR-1255a	0	0	1
chr19:12940343\|12940452	hsa-miR-548o-3p	0	0	1
chr19:12940343\|12940452	hsa-miR-548o	0	0	1
chr19:12940343\|12940452	hsa-miR-188-3p	0	0	1
chr19:12940343\|12940452	hsa-miR-1302	0	0	1
chr19:12940343\|12940452	hsa-miR-1255b	0	0	1
chr19:12940343\|12940452	hsa-miR-7	0	0	1
chr19:12940343\|12940452	hsa-miR-762	1	0	0
chr19:12940343\|12940452	hsa-miR-3131	1	0	0
chr19:12940343\|12940452	hsa-miR-4463	1	1	0
chr19:12940343\|12940452	hsa-miR-4505	1	0	0
chr19:12940343\|12940452	hsa-miR-4656	1	0	0
chr19:12940343\|12940452	hsa-miR-5787	1	0	0
chr19:12940343\|12940452	hsa-miR-6125	1	0	0
chr19:12940343\|12940452	hsa-miR-8063	0	1	0
chr19:12940343\|12940452	hsa-miR-7155-5p	1	0	0
chr19:12940343\|12940452	hsa-miR-6728-5p	0	1	0
chr19:12940343\|12940452	hsa-miR-8071	1	0	0
chr19:12940343\|12940452	hsa-miR-5187-5p	0	1	0
chr19:12940343\|12940452	hsa-miR-6757-5p	0	1	0
chr19:12940343\|12940452	hsa-miR-4787-5p	1	0	0
chr19:12940343\|12940452	hsa-miR-664b-5p	0	1	0
chr19:12940343\|12940452	hsa-miR-7152-5p	0	1	0
chr19:12940343\|12940452	hsa-miR-6812-5p	1	1	0
chr19:12940343\|12940452	hsa-miR-6737-5p	1	0	0
chr19:12940343\|12940452	hsa-miR-6819-5p	1	1	0
chr19:12940343\|12940452	hsa-miR-6808-5p	1	0	0
chr19:12940343\|12940452	hsa-miR-4646-5p	1	0	0
chr19:12940343\|12940452	hsa-miR-6727-3p	0	1	0
chr19:12940343\|12940452	hsa-miR-320a-3p	1	0	0
chr19:12940343\|12940452	hsa-miR-320b	1	0	0
chr19:12940343\|12940452	hsa-miR-320c	1	0	0
chr19:12940343\|12940452	hsa-miR-619-5p	1	1	0
chr19:12940343\|12940452	hsa-miR-3913-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:12940343\|12940452
ORF Type	ORF1
Protein Length	34
Nucleotide Length	102
Protein Sequence	MESVGSSILARSSQSSGFEASGSFIFLGGRKSQS
Nucleotide Sequence	TTGGAGTCTGTGGGATCATCGATCTTGGCCCGCTCATCCCAGTCTTCCGGTTTTGAAGCATCAGGATCCTTTATCTTCTTGGGTGGCAGGAAGTCCCAATCG

CircID	chr19:12940343\|12940452
ORF Type	ORF2
Protein Length	32
Nucleotide Length	96
Protein Sequence	MWDHRSWPAHPSLPVLKHQDPLSSWVAGSPNR
Nucleotide Sequence	CTGTGGGATCATCGATCTTGGCCCGCTCATCCCAGTCTTCCGGTTTTGAAGCATCAGGATCCTTTATCTTCTTGGGTGGCAGGAAGTCCCAATCGT

CircID	chr19:12940343\|12940452
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MPPKKIKDPDASKPEDWDERAKIDDPTDSKPE
Nucleotide Sequence	CTGCCACCCAAGAAGATAAAGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGGGCCAAGATCGATGATCCCACAGACTCCAAGCCTGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information