CircRNA Information

General Information
circRNA Basic Information
CircID chr19:12943803|12943909
Strand +
CircType exon
Host Gene ENSG00000179218.12;
Algorism CIRI2;
Sequence AGCTCGTCCTTGGCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCTCATCCTCATCTTTGTCCTCATCATCCTCCTTGTCCTCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:12943803|12943909 hsa-miR-1255a 0 0 1
chr19:12943803|12943909 hsa-miR-1272 0 0 1
chr19:12943803|12943909 hsa-miR-1224-5p 1 0 1
chr19:12943803|12943909 hsa-miR-1255b 0 0 1
chr19:12943803|12943909 hsa-miR-1185 0 0 1
chr19:12943803|12943909 hsa-miR-583 1 0 0
chr19:12943803|12943909 hsa-miR-765 1 0 0
chr19:12943803|12943909 hsa-miR-665 1 0 0
chr19:12943803|12943909 hsa-miR-921 1 0 0
chr19:12943803|12943909 hsa-miR-1261 1 0 0
chr19:12943803|12943909 hsa-miR-3122 1 0 0
chr19:12943803|12943909 hsa-miR-3125 1 0 0
chr19:12943803|12943909 hsa-miR-3154 1 0 0
chr19:12943803|12943909 hsa-miR-4257 1 0 0
chr19:12943803|12943909 hsa-miR-4270 1 0 0
chr19:12943803|12943909 hsa-miR-4271 1 0 0
chr19:12943803|12943909 hsa-miR-3911 1 0 0
chr19:12943803|12943909 hsa-miR-3916 1 0 0
chr19:12943803|12943909 hsa-miR-3945 1 0 0
chr19:12943803|12943909 hsa-miR-4441 1 1 0
chr19:12943803|12943909 hsa-miR-4462 1 0 0
chr19:12943803|12943909 hsa-miR-4476 1 0 0
chr19:12943803|12943909 hsa-miR-4478 1 0 0
chr19:12943803|12943909 hsa-miR-2392 1 1 0
chr19:12943803|12943909 hsa-miR-4514 1 0 0
chr19:12943803|12943909 hsa-miR-4516 1 0 0
chr19:12943803|12943909 hsa-miR-4525 1 0 0
chr19:12943803|12943909 hsa-miR-4533 1 0 0
chr19:12943803|12943909 hsa-miR-4647 1 0 0
chr19:12943803|12943909 hsa-miR-4656 1 0 0
chr19:12943803|12943909 hsa-miR-4658 1 0 0
chr19:12943803|12943909 hsa-miR-4689 1 1 0
chr19:12943803|12943909 hsa-miR-4710 1 0 0
chr19:12943803|12943909 hsa-miR-4739 1 1 0
chr19:12943803|12943909 hsa-miR-4751 1 0 0
chr19:12943803|12943909 hsa-miR-4784 1 0 0
chr19:12943803|12943909 hsa-miR-5787 1 0 0
chr19:12943803|12943909 hsa-miR-6088 1 1 0
chr19:12943803|12943909 hsa-miR-6124 1 0 0
chr19:12943803|12943909 hsa-miR-6127 1 0 0
chr19:12943803|12943909 hsa-miR-6133 1 0 0
chr19:12943803|12943909 hsa-miR-6745 1 0 0
chr19:12943803|12943909 hsa-miR-8089 1 0 0
chr19:12943803|12943909 hsa-miR-12118 1 1 0
chr19:12943803|12943909 hsa-miR-6734-5p 1 1 0
chr19:12943803|12943909 hsa-miR-504-3p 1 0 0
chr19:12943803|12943909 hsa-miR-6809-5p 1 1 0
chr19:12943803|12943909 hsa-miR-6765-5p 1 0 0
chr19:12943803|12943909 hsa-miR-3150a-3p 1 0 0
chr19:12943803|12943909 hsa-miR-7106-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6825-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6894-5p 1 1 0
chr19:12943803|12943909 hsa-miR-1972 0 1 0
chr19:12943803|12943909 hsa-miR-125a-3p 1 0 0
chr19:12943803|12943909 hsa-miR-766-5p 1 1 0
chr19:12943803|12943909 hsa-miR-6804-5p 1 0 0
chr19:12943803|12943909 hsa-miR-5187-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6515-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6873-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6880-5p 1 0 0
chr19:12943803|12943909 hsa-miR-7847-3p 1 1 0
chr19:12943803|12943909 hsa-miR-4695-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6744-5p 1 0 0
chr19:12943803|12943909 hsa-miR-4709-3p 1 0 0
chr19:12943803|12943909 hsa-miR-4722-5p 1 0 0
chr19:12943803|12943909 hsa-miR-7154-3p 1 1 0
chr19:12943803|12943909 hsa-miR-3605-5p 1 1 0
chr19:12943803|12943909 hsa-miR-3180-3p 1 0 0
chr19:12943803|12943909 hsa-miR-6798-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6760-5p 1 0 0
chr19:12943803|12943909 hsa-miR-2467-3p 0 1 0
chr19:12943803|12943909 hsa-miR-3150b-3p 1 0 0
chr19:12943803|12943909 hsa-miR-6810-5p 1 1 0
chr19:12943803|12943909 hsa-miR-7855-5p 1 0 0
chr19:12943803|12943909 hsa-miR-1226-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6763-3p 0 1 0
chr19:12943803|12943909 hsa-miR-1229-5p 1 0 0
chr19:12943803|12943909 hsa-miR-4640-5p 1 0 0
chr19:12943803|12943909 hsa-miR-3691-5p 1 0 0
chr19:12943803|12943909 hsa-miR-4764-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6771-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6847-5p 1 1 0
chr19:12943803|12943909 hsa-miR-3616-3p 1 0 0
chr19:12943803|12943909 hsa-miR-6830-5p 1 0 0
chr19:12943803|12943909 hsa-miR-5010-5p 1 1 0
chr19:12943803|12943909 hsa-miR-664b-5p 1 0 0
chr19:12943803|12943909 hsa-miR-423-5p 1 0 0
chr19:12943803|12943909 hsa-miR-4707-5p 0 1 0
chr19:12943803|12943909 hsa-miR-5004-5p 1 1 0
chr19:12943803|12943909 hsa-miR-6503-3p 1 0 0
chr19:12943803|12943909 hsa-miR-6769b-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6870-5p 1 0 0
chr19:12943803|12943909 hsa-miR-3180 1 0 0
chr19:12943803|12943909 hsa-miR-6737-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6754-5p 1 1 0
chr19:12943803|12943909 hsa-miR-6819-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6851-5p 1 0 0
chr19:12943803|12943909 hsa-miR-11181-3p 1 0 0
chr19:12943803|12943909 hsa-miR-1249-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6763-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6797-5p 1 0 0
chr19:12943803|12943909 hsa-miR-7111-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6780b-5p 1 0 0
chr19:12943803|12943909 hsa-miR-10526-3p 1 0 0
chr19:12943803|12943909 hsa-miR-4649-5p 1 0 0
chr19:12943803|12943909 hsa-miR-4701-3p 1 0 0
chr19:12943803|12943909 hsa-miR-4725-3p 1 0 0
chr19:12943803|12943909 hsa-miR-6729-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6738-5p 1 0 0
chr19:12943803|12943909 hsa-miR-675-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6794-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6846-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6848-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6858-5p 1 1 0
chr19:12943803|12943909 hsa-miR-1238-5p 1 0 0
chr19:12943803|12943909 hsa-miR-4758-5p 1 0 0
chr19:12943803|12943909 hsa-miR-4769-5p 1 0 0
chr19:12943803|12943909 hsa-miR-4665-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6736-5p 1 0 0
chr19:12943803|12943909 hsa-miR-4700-5p 1 0 0
chr19:12943803|12943909 hsa-miR-3173-3p 1 1 0
chr19:12943803|12943909 hsa-miR-3679-5p 1 1 0
chr19:12943803|12943909 hsa-miR-4747-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6891-5p 1 1 0
chr19:12943803|12943909 hsa-miR-4716-3p 1 1 0
chr19:12943803|12943909 hsa-miR-4667-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6849-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6859-5p 1 0 0
chr19:12943803|12943909 hsa-miR-6884-5p 1 0 0
chr19:12943803|12943909 hsa-miR-1255b-5p 1 0 0
chr19:12943803|12943909 hsa-miR-10523-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:12943803|12943909
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MAWPGTSSSSSSSLSSSSSSSSSLSSSSSLSS
Nucleotide Sequence TTGGCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCTCATCCTCATCTTTGTCCTCATCATCCTCCTTGTCCTCT

CircID chr19:12943803|12943909
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MAGDIFLLIFLLVLLILLILIFVLIILLVLC
Nucleotide Sequence CTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCTCATCCTCATCTTTGTCCTCATCATCCTCCTTGTCCTCTGC

CircID chr19:12943803|12943909
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MMRTKMRMRRMRRTRRKMRRKMSPARPRTS
Nucleotide Sequence ATGATGAGGACAAAGATGAGGATGAGGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGCCAAGGACGAGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites