CircRNA Information

General Information
circRNA Basic Information
CircID chr19:13912360|13912593
Strand +
CircType exon
Host Gene ENSG00000132024.16;
Algorism CIRI2;
Sequence CTGGGCCACAGGAGGTGGGGTCTCTGAAGCCTTCTGCTCCTCTCCAAGGACCTCATTTAGCTCCGCCTGCAGGGACACACAGCCAGGGCAGGATATAAGGGCCTGCTGGATGGGGGCAACCGGATCAGAGCCCCCACCCCGCCCTCAGTGCTCACCAGCAGGTCATCATCAGCCTCCAAGTCGTCCTCATCCGTCCCCTCCTCCTCATCCTCATCCGGGTCTCTCATGCACAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:13912360|13912593 hsa-miR-214-5p 0 0 1
chr19:13912360|13912593 hsa-miR-214-3p 0 0 1
chr19:13912360|13912593 hsa-miR-184 1 0 1
chr19:13912360|13912593 hsa-miR-185-5p 0 0 1
chr19:13912360|13912593 hsa-miR-185-3p 0 0 1
chr19:13912360|13912593 hsa-miR-370-5p 0 0 1
chr19:13912360|13912593 hsa-miR-370-3p 0 0 1
chr19:13912360|13912593 hsa-miR-432-5p 0 0 1
chr19:13912360|13912593 hsa-miR-432-3p 0 0 1
chr19:13912360|13912593 hsa-miR-608 1 0 1
chr19:13912360|13912593 hsa-miR-610 0 1 1
chr19:13912360|13912593 hsa-miR-620 0 0 1
chr19:13912360|13912593 hsa-miR-631 0 0 1
chr19:13912360|13912593 hsa-miR-650 0 0 1
chr19:13912360|13912593 hsa-miR-765 1 1 1
chr19:13912360|13912593 hsa-miR-298 0 0 1
chr19:13912360|13912593 hsa-miR-874-5p 0 0 1
chr19:13912360|13912593 hsa-miR-874-3p 0 0 1
chr19:13912360|13912593 hsa-miR-890 0 0 1
chr19:13912360|13912593 hsa-miR-760 0 1 1
chr19:13912360|13912593 hsa-miR-938 0 0 1
chr19:13912360|13912593 hsa-miR-663b 1 0 1
chr19:13912360|13912593 hsa-miR-1205 0 0 1
chr19:13912360|13912593 hsa-miR-1255a 0 0 1
chr19:13912360|13912593 hsa-miR-1270 0 0 1
chr19:13912360|13912593 hsa-miR-1272 0 0 1
chr19:13912360|13912593 hsa-miR-1224-5p 1 0 1
chr19:13912360|13912593 hsa-miR-485-5p 0 1 1
chr19:13912360|13912593 hsa-miR-146b-3p 0 0 1
chr19:13912360|13912593 hsa-miR-1224-3p 0 1 1
chr19:13912360|13912593 hsa-miR-671-3p 0 0 1
chr19:13912360|13912593 hsa-miR-338-3p 0 0 1
chr19:13912360|13912593 hsa-miR-1255b 0 0 1
chr19:13912360|13912593 hsa-miR-138 0 0 1
chr19:13912360|13912593 hsa-miR-768-5p 0 0 1
chr19:13912360|13912593 hsa-miR-663 0 0 1
chr19:13912360|13912593 hsa-miR-1185 0 0 1
chr19:13912360|13912593 hsa-miR-596 1 0 0
chr19:13912360|13912593 hsa-miR-637 1 0 0
chr19:13912360|13912593 hsa-miR-663a 1 0 0
chr19:13912360|13912593 hsa-miR-658 1 0 0
chr19:13912360|13912593 hsa-miR-762 1 0 0
chr19:13912360|13912593 hsa-miR-1183 1 0 0
chr19:13912360|13912593 hsa-miR-1268a 1 0 0
chr19:13912360|13912593 hsa-miR-1275 1 0 0
chr19:13912360|13912593 hsa-miR-1976 1 0 0
chr19:13912360|13912593 hsa-miR-3141 1 1 0
chr19:13912360|13912593 hsa-miR-3147 1 0 0
chr19:13912360|13912593 hsa-miR-3154 1 0 0
chr19:13912360|13912593 hsa-miR-3175 1 0 0
chr19:13912360|13912593 hsa-miR-3196 1 0 0
chr19:13912360|13912593 hsa-miR-4299 0 1 0
chr19:13912360|13912593 hsa-miR-4271 1 0 0
chr19:13912360|13912593 hsa-miR-4281 1 0 0
chr19:13912360|13912593 hsa-miR-3911 1 0 0
chr19:13912360|13912593 hsa-miR-3929 0 1 0
chr19:13912360|13912593 hsa-miR-3937 1 1 0
chr19:13912360|13912593 hsa-miR-1268b 1 0 0
chr19:13912360|13912593 hsa-miR-4447 0 1 0
chr19:13912360|13912593 hsa-miR-4462 1 0 0
chr19:13912360|13912593 hsa-miR-4463 1 0 0
chr19:13912360|13912593 hsa-miR-4468 0 1 0
chr19:13912360|13912593 hsa-miR-4488 1 0 0
chr19:13912360|13912593 hsa-miR-4491 1 0 0
chr19:13912360|13912593 hsa-miR-4502 0 1 0
chr19:13912360|13912593 hsa-miR-2392 1 1 0
chr19:13912360|13912593 hsa-miR-4516 1 0 0
chr19:13912360|13912593 hsa-miR-4525 1 0 0
chr19:13912360|13912593 hsa-miR-4533 1 0 0
chr19:13912360|13912593 hsa-miR-4651 1 1 0
chr19:13912360|13912593 hsa-miR-4656 1 0 0
chr19:13912360|13912593 hsa-miR-4689 1 0 0
chr19:13912360|13912593 hsa-miR-4706 1 0 0
chr19:13912360|13912593 hsa-miR-4710 1 0 0
chr19:13912360|13912593 hsa-miR-4734 1 0 0
chr19:13912360|13912593 hsa-miR-4739 1 0 0
chr19:13912360|13912593 hsa-miR-4784 1 0 0
chr19:13912360|13912593 hsa-miR-5194 1 0 0
chr19:13912360|13912593 hsa-miR-5787 1 0 0
chr19:13912360|13912593 hsa-miR-6076 1 0 0
chr19:13912360|13912593 hsa-miR-6085 1 0 0
chr19:13912360|13912593 hsa-miR-6133 1 0 0
chr19:13912360|13912593 hsa-miR-6165 1 0 0
chr19:13912360|13912593 hsa-miR-6863 1 0 0
chr19:13912360|13912593 hsa-miR-7704 1 0 0
chr19:13912360|13912593 hsa-miR-7974 0 1 0
chr19:13912360|13912593 hsa-miR-8072 1 0 0
chr19:13912360|13912593 hsa-miR-8075 0 1 0
chr19:13912360|13912593 hsa-miR-8089 1 0 0
chr19:13912360|13912593 hsa-miR-11400 1 1 0
chr19:13912360|13912593 hsa-miR-12114 1 0 0
chr19:13912360|13912593 hsa-miR-12116 1 0 0
chr19:13912360|13912593 hsa-miR-12118 1 0 0
chr19:13912360|13912593 hsa-miR-12131 0 1 0
chr19:13912360|13912593 hsa-miR-4433b-3p 1 0 0
chr19:13912360|13912593 hsa-miR-6734-5p 1 1 0
chr19:13912360|13912593 hsa-miR-6765-5p 1 0 0
chr19:13912360|13912593 hsa-miR-125b-1-3p 1 0 0
chr19:13912360|13912593 hsa-miR-7106-5p 1 1 0
chr19:13912360|13912593 hsa-miR-6825-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6894-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6822-3p 1 0 0
chr19:13912360|13912593 hsa-miR-6720-5p 1 0 0
chr19:13912360|13912593 hsa-miR-125a-3p 1 0 0
chr19:13912360|13912593 hsa-miR-6799-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6510-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6728-5p 1 0 0
chr19:13912360|13912593 hsa-miR-3692-5p 0 1 0
chr19:13912360|13912593 hsa-miR-766-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6804-5p 1 0 0
chr19:13912360|13912593 hsa-miR-139-3p 1 0 0
chr19:13912360|13912593 hsa-miR-5187-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4786-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6515-5p 0 1 0
chr19:13912360|13912593 hsa-miR-6089 1 0 0
chr19:13912360|13912593 hsa-miR-6757-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6880-5p 1 0 0
chr19:13912360|13912593 hsa-miR-7847-3p 1 0 0
chr19:13912360|13912593 hsa-miR-4695-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6744-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4653-3p 1 1 0
chr19:13912360|13912593 hsa-miR-4722-5p 1 0 0
chr19:13912360|13912593 hsa-miR-3064-5p 0 1 0
chr19:13912360|13912593 hsa-miR-3622b-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6721-5p 1 0 0
chr19:13912360|13912593 hsa-miR-8069 1 0 0
chr19:13912360|13912593 hsa-miR-6776-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6742-5p 1 0 0
chr19:13912360|13912593 hsa-miR-3605-5p 1 1 0
chr19:13912360|13912593 hsa-miR-1292-5p 1 0 0
chr19:13912360|13912593 hsa-miR-3180-3p 1 0 0
chr19:13912360|13912593 hsa-miR-6732-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6805-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6798-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6782-5p 1 0 0
chr19:13912360|13912593 hsa-miR-3150b-3p 1 0 0
chr19:13912360|13912593 hsa-miR-6810-5p 1 0 0
chr19:13912360|13912593 hsa-miR-7855-5p 1 0 0
chr19:13912360|13912593 hsa-miR-5008-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6786-5p 1 0 0
chr19:13912360|13912593 hsa-miR-7109-5p 1 0 0
chr19:13912360|13912593 hsa-miR-1226-5p 1 1 0
chr19:13912360|13912593 hsa-miR-1229-5p 1 0 0
chr19:13912360|13912593 hsa-miR-3691-5p 1 1 0
chr19:13912360|13912593 hsa-miR-4764-5p 1 0 0
chr19:13912360|13912593 hsa-miR-1908-5p 1 1 0
chr19:13912360|13912593 hsa-miR-1228-5p 1 0 0
chr19:13912360|13912593 hsa-miR-296-3p 1 0 0
chr19:13912360|13912593 hsa-miR-6771-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4690-5p 1 0 0
chr19:13912360|13912593 hsa-miR-92b-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6834-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4743-5p 1 0 0
chr19:13912360|13912593 hsa-miR-149-3p 1 0 0
chr19:13912360|13912593 hsa-miR-3616-3p 1 0 0
chr19:13912360|13912593 hsa-miR-6824-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6781-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6892-5p 1 0 0
chr19:13912360|13912593 hsa-miR-664b-5p 0 1 0
chr19:13912360|13912593 hsa-miR-423-5p 1 1 0
chr19:13912360|13912593 hsa-miR-3191-3p 1 1 0
chr19:13912360|13912593 hsa-miR-1225-5p 1 0 0
chr19:13912360|13912593 hsa-miR-660-3p 0 1 0
chr19:13912360|13912593 hsa-miR-744-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4750-5p 1 0 0
chr19:13912360|13912593 hsa-miR-3151-3p 0 1 0
chr19:13912360|13912593 hsa-miR-6851-3p 0 1 0
chr19:13912360|13912593 hsa-miR-4712-3p 0 1 0
chr19:13912360|13912593 hsa-miR-5586-5p 0 1 0
chr19:13912360|13912593 hsa-miR-10400-5p 1 0 0
chr19:13912360|13912593 hsa-miR-1233-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4763-3p 1 0 0
chr19:13912360|13912593 hsa-miR-6778-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6787-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6816-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6870-5p 1 0 0
chr19:13912360|13912593 hsa-miR-1343-5p 1 0 0
chr19:13912360|13912593 hsa-miR-3180 1 0 0
chr19:13912360|13912593 hsa-miR-5001-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6737-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6743-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6756-5p 1 1 0
chr19:13912360|13912593 hsa-miR-6819-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6851-5p 1 0 0
chr19:13912360|13912593 hsa-miR-11181-3p 1 1 0
chr19:13912360|13912593 hsa-miR-1249-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6763-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6774-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6779-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6780a-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6797-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6875-5p 1 1 0
chr19:13912360|13912593 hsa-miR-7111-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4728-5p 1 0 0
chr19:13912360|13912593 hsa-miR-5196-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6780b-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6836-5p 1 0 0
chr19:13912360|13912593 hsa-miR-10396b-5p 1 1 0
chr19:13912360|13912593 hsa-miR-1237-5p 1 0 0
chr19:13912360|13912593 hsa-miR-328-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4649-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4745-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4749-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6729-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6735-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6738-5p 1 0 0
chr19:13912360|13912593 hsa-miR-675-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6794-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6795-5p 1 1 0
chr19:13912360|13912593 hsa-miR-6846-5p 1 1 0
chr19:13912360|13912593 hsa-miR-6848-5p 1 1 0
chr19:13912360|13912593 hsa-miR-6858-5p 1 1 0
chr19:13912360|13912593 hsa-miR-6883-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6887-5p 1 1 0
chr19:13912360|13912593 hsa-miR-4723-5p 1 0 0
chr19:13912360|13912593 hsa-miR-939-5p 1 1 0
chr19:13912360|13912593 hsa-miR-4758-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6511b-5p 0 1 0
chr19:13912360|13912593 hsa-miR-3940-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6856-5p 1 1 0
chr19:13912360|13912593 hsa-miR-6799-3p 1 0 0
chr19:13912360|13912593 hsa-miR-1914-3p 1 0 0
chr19:13912360|13912593 hsa-miR-4665-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4700-5p 1 0 0
chr19:13912360|13912593 hsa-miR-10398-3p 1 0 0
chr19:13912360|13912593 hsa-miR-3679-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4747-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6891-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4716-3p 1 0 0
chr19:13912360|13912593 hsa-miR-6766-5p 0 1 0
chr19:13912360|13912593 hsa-miR-6785-5p 1 1 0
chr19:13912360|13912593 hsa-miR-4667-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6790-5p 1 0 0
chr19:13912360|13912593 hsa-miR-6791-5p 1 0 0
chr19:13912360|13912593 hsa-miR-4722-3p 1 0 0
chr19:13912360|13912593 hsa-miR-3085-3p 0 1 0
chr19:13912360|13912593 hsa-miR-6884-5p 1 1 0
chr19:13912360|13912593 hsa-miR-10394-5p 0 1 0
chr19:13912360|13912593 hsa-miR-6504-5p 1 1 0
chr19:13912360|13912593 hsa-miR-1255b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:13912360|13912593
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence MQGHTARAGYKGLLDGGNRIRAPTPPSVLTSRSSSASKSSSSVPSSSSSSGSLMHR
Nucleotide Sequence CTGCAGGGACACACAGCCAGGGCAGGATATAAGGGCCTGCTGGATGGGGGCAACCGGATCAGAGCCCCCACCCCGCCCTCAGTGCTCACCAGCAGGTCATCATCAGCCTCCAAGTCGTCCTCATCCGTCCCCTCCTCCTCATCCTCATCCGGGTCTCTCATGCACAGG
CircID chr19:13912360|13912593
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MGATGSEPPPRPQCSPAGHHQPPSRPHPSPPPHPHPGLSCT
Nucleotide Sequence ATGGGGGCAACCGGATCAGAGCCCCCACCCCGCCCTCAGTGCTCACCAGCAGGTCATCATCAGCCTCCAAGTCGTCCTCATCCGTCCCCTCCTCCTCATCCTCATCCGGGTCTCTCATGCACA
CircID chr19:13912360|13912593
ORF Type ORF3
Protein Length 58
Nucleotide Length 177
Protein Sequence LCMRDPDEDEEEGTDEDDLEADDDLLVSTEGGVGALIRLPPSSRPLYPALAVCPCRRS
Nucleotide Sequence CTGTGCATGAGAGACCCGGATGAGGATGAGGAGGAGGGGACGGATGAGGACGACTTGGAGGCTGATGATGACCTGCTGGTGAGCACTGAGGGCGGGGTGGGGGCTCTGATCCGGTTGCCCCCATCCAGCAGGCCCTTATATCCTGCCCTGGCTGTGTGTCCCTGCAGGCGGAGCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab