CircRNA Information

General Information
circRNA Basic Information
CircID chr19:13926825|13927196
Strand +
CircType exon
Host Gene ENSG00000132024.16;
Algorism CIRI2;
Sequence CCGGTCAGTCTTGAACAGCCCCCCCTTGTGAACCACTTCGAACTTGATGCCCTTGGTCTGGATGGCCCTTCGGAAGCCACGGTGGCTGCGGTTGATGCAGAGTTTGAACTGCTCCTTGAACTCTGCAGGAGGAAGGAGGGAGAGGAAGTTGGGTGGGGTCAGGCCATTGTCTTATGTCCCTTCTGCTGCAAGGGAGTAGGGGTAGGGTGCTTCCAGCCGAGGCTCACCAGGGGAGTCTGTGTTCTTGATCACACTGGTCTTGTCTTTCTGAGCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:13926825|13927196 hsa-miR-107 0 0 1
chr19:13926825|13927196 hsa-miR-623 0 0 1
chr19:13926825|13927196 hsa-miR-641 0 0 1
chr19:13926825|13927196 hsa-miR-1301-5p 0 0 1
chr19:13926825|13927196 hsa-miR-1301-3p 0 0 1
chr19:13926825|13927196 hsa-miR-298 0 0 1
chr19:13926825|13927196 hsa-miR-922 0 0 1
chr19:13926825|13927196 hsa-miR-513b-5p 0 0 1
chr19:13926825|13927196 hsa-miR-513b-3p 0 0 1
chr19:13926825|13927196 hsa-miR-140-5p 0 0 1
chr19:13926825|13927196 hsa-miR-671-5p 0 0 1
chr19:13926825|13927196 hsa-miR-199a-5p 0 0 1
chr19:13926825|13927196 hsa-miR-331-3p 0 0 1
chr19:13926825|13927196 hsa-miR-199b-5p 0 0 1
chr19:13926825|13927196 hsa-miR-103 0 0 1
chr19:13926825|13927196 hsa-miR-663b 1 0 0
chr19:13926825|13927196 hsa-miR-1204 1 0 0
chr19:13926825|13927196 hsa-miR-3176 1 0 0
chr19:13926825|13927196 hsa-miR-4253 1 0 0
chr19:13926825|13927196 hsa-miR-3945 1 0 0
chr19:13926825|13927196 hsa-miR-4754 1 0 0
chr19:13926825|13927196 hsa-miR-4788 1 0 0
chr19:13926825|13927196 hsa-miR-7703 1 0 0
chr19:13926825|13927196 hsa-miR-9898 1 0 0
chr19:13926825|13927196 hsa-miR-4433b-3p 1 0 0
chr19:13926825|13927196 hsa-miR-4726-3p 1 0 0
chr19:13926825|13927196 hsa-miR-1972 1 0 0
chr19:13926825|13927196 hsa-miR-6892-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6842-3p 1 0 0
chr19:13926825|13927196 hsa-miR-7110-3p 1 0 0
chr19:13926825|13927196 hsa-miR-659-3p 1 0 0
chr19:13926825|13927196 hsa-miR-877-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6732-5p 1 0 0
chr19:13926825|13927196 hsa-miR-6735-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6882-3p 1 0 0
chr19:13926825|13927196 hsa-miR-4763-5p 1 0 0
chr19:13926825|13927196 hsa-miR-7108-3p 1 0 0
chr19:13926825|13927196 hsa-miR-4640-5p 1 0 0
chr19:13926825|13927196 hsa-miR-6753-5p 1 0 0
chr19:13926825|13927196 hsa-miR-7113-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6771-5p 1 0 0
chr19:13926825|13927196 hsa-miR-4717-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6878-3p 1 0 0
chr19:13926825|13927196 hsa-miR-7111-3p 1 0 0
chr19:13926825|13927196 hsa-miR-1184 1 0 0
chr19:13926825|13927196 hsa-miR-6895-5p 1 0 0
chr19:13926825|13927196 hsa-miR-4758-3p 1 0 0
chr19:13926825|13927196 hsa-miR-4778-3p 1 0 0
chr19:13926825|13927196 hsa-miR-1224-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6871-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6752-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6886-3p 1 0 0
chr19:13926825|13927196 hsa-miR-3151-3p 1 0 0
chr19:13926825|13927196 hsa-miR-3184-3p 1 0 0
chr19:13926825|13927196 hsa-miR-4750-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6846-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6750-3p 1 0 0
chr19:13926825|13927196 hsa-miR-3162-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6787-5p 1 0 0
chr19:13926825|13927196 hsa-miR-6775-5p 1 0 0
chr19:13926825|13927196 hsa-miR-5001-5p 1 0 0
chr19:13926825|13927196 hsa-miR-6743-5p 1 0 0
chr19:13926825|13927196 hsa-miR-6756-5p 1 0 0
chr19:13926825|13927196 hsa-miR-6851-5p 1 0 0
chr19:13926825|13927196 hsa-miR-6862-5p 1 0 0
chr19:13926825|13927196 hsa-miR-328-5p 1 0 0
chr19:13926825|13927196 hsa-miR-4726-5p 1 0 0
chr19:13926825|13927196 hsa-miR-6735-5p 1 0 0
chr19:13926825|13927196 hsa-miR-6848-5p 1 0 0
chr19:13926825|13927196 hsa-miR-4436b-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6885-5p 1 0 0
chr19:13926825|13927196 hsa-miR-3085-5p 1 0 0
chr19:13926825|13927196 hsa-miR-3184-5p 1 0 0
chr19:13926825|13927196 hsa-miR-6753-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6784-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6862-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6810-3p 1 0 0
chr19:13926825|13927196 hsa-miR-7114-3p 1 0 0
chr19:13926825|13927196 hsa-miR-1234-3p 1 0 0
chr19:13926825|13927196 hsa-miR-6797-3p 1 0 0
chr19:13926825|13927196 hsa-miR-5195-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:13926825|13927196
ORF Type ORF1
Protein Length 72
Nucleotide Length 216
Protein Sequence MDGPSEATVAAVDAEFELLLELCRRKEGEEVGWGQAIVLCPFCCKGVGVGCFQPRLTRGVCVLDHTGLVFLS
Nucleotide Sequence CTGGATGGCCCTTCGGAAGCCACGGTGGCTGCGGTTGATGCAGAGTTTGAACTGCTCCTTGAACTCTGCAGGAGGAAGGAGGGAGAGGAAGTTGGGTGGGGTCAGGCCATTGTCTTATGTCCCTTCTGCTGCAAGGGAGTAGGGGTAGGGTGCTTCCAGCCGAGGCTCACCAGGGGAGTCTGTGTTCTTGATCACACTGGTCTTGTCTTTCTGAGC
CircID chr19:13926825|13927196
ORF Type ORF2
Protein Length 51
Nucleotide Length 156
Protein Sequence MMPLVWMALRKPRWLRLMQSLNCSLNSAGGRRERKLGGVRPLSYVPSAARE
Nucleotide Sequence TTGATGCCCTTGGTCTGGATGGCCCTTCGGAAGCCACGGTGGCTGCGGTTGATGCAGAGTTTGAACTGCTCCTTGAACTCTGCAGGAGGAAGGAGGGAGAGGAAGTTGGGTGGGGTCAGGCCATTGTCTTATGTCCCTTCTGCTGCAAGGGAGTAG
CircID chr19:13926825|13927196
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence MQEEGGRGSWVGSGHCLMSLLLQGSRGRVLPAEAHQGSLCS
Nucleotide Sequence CTGCAGGAGGAAGGAGGGAGAGGAAGTTGGGTGGGGTCAGGCCATTGTCTTATGTCCCTTCTGCTGCAAGGGAGTAGGGGTAGGGTGCTTCCAGCCGAGGCTCACCAGGGGAGTCTGTGTTCTTGA
CircID chr19:13926825|13927196
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MQSSRSSSNSASTAATVASEGPSRPRASSSKWFTRGGCSRLT
Nucleotide Sequence CTGCAGAGTTCAAGGAGCAGTTCAAACTCTGCATCAACCGCAGCCACCGTGGCTTCCGAAGGGCCATCCAGACCAAGGGCATCAAGTTCGAAGTGGTTCACAAGGGGGGGCTGTTCAAGACTGACC
CircID chr19:13926825|13927196
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MHQPQPPWLPKGHPDQGHQVRSGSQGGAVQD
Nucleotide Sequence CTGCATCAACCGCAGCCACCGTGGCTTCCGAAGGGCCATCCAGACCAAGGGCATCAAGTTCGAAGTGGTTCACAAGGGGGGGCTGTTCAAGACTGA
CircID chr19:13926825|13927196
ORF Type ORF6
Protein Length 54
Nucleotide Length 162
Protein Sequence MTPPNFLSLLPPAEFKEQFKLCINRSHRGFRRAIQTKGIKFEVVHKGGLFKTDR
Nucleotide Sequence CTGACCCCACCCAACTTCCTCTCCCTCCTTCCTCCTGCAGAGTTCAAGGAGCAGTTCAAACTCTGCATCAACCGCAGCCACCGTGGCTTCCGAAGGGCCATCCAGACCAAGGGCATCAAGTTCGAAGTGGTTCACAAGGGGGGGCTGTTCAAGACTGACCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab