CircNet

General Information

circRNA Basic Information

CircID	chr19:13965645\|13965758
Strand	-
CircType	exon
Host Gene	ENSG00000132005.7;
Algorism	CIRI2;
Sequence	GTCGGGAATGAGGATTTCCACCAGGCCCTGGTACAGCACGTTGTCACAGTGCTTGGTCCATTGGAGCACGGGCTCGAACTTGGAGAGGAGCACCAGGATGGCTTTGGGCAGTCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:13965645\|13965758	hsa-miR-515-5p	0	1	1
chr19:13965645\|13965758	hsa-miR-542-3p	0	0	1
chr19:13965645\|13965758	hsa-miR-549	0	0	1
chr19:13965645\|13965758	hsa-miR-346	1	0	0
chr19:13965645\|13965758	hsa-miR-1913	1	0	0
chr19:13965645\|13965758	hsa-miR-2861	0	1	0
chr19:13965645\|13965758	hsa-miR-4268	0	1	0
chr19:13965645\|13965758	hsa-miR-3907	1	1	0
chr19:13965645\|13965758	hsa-miR-3918	0	1	0
chr19:13965645\|13965758	hsa-miR-3689f	1	0	0
chr19:13965645\|13965758	hsa-miR-18a-3p	1	0	0
chr19:13965645\|13965758	hsa-miR-5006-5p	1	0	0
chr19:13965645\|13965758	hsa-miR-4763-5p	1	0	0
chr19:13965645\|13965758	hsa-miR-3127-5p	0	1	0
chr19:13965645\|13965758	hsa-miR-4776-5p	1	1	0
chr19:13965645\|13965758	hsa-miR-1911-3p	0	1	0
chr19:13965645\|13965758	hsa-miR-106b-3p	0	1	0
chr19:13965645\|13965758	hsa-miR-4685-5p	0	1	0
chr19:13965645\|13965758	hsa-miR-6837-5p	0	1	0
chr19:13965645\|13965758	hsa-miR-6764-5p	0	1	0
chr19:13965645\|13965758	hsa-miR-519e-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:13965645\|13965758
ORF Type	ORF1
Protein Length	29
Nucleotide Length	87
Protein Sequence	MVQHVVTVLGPLEHGLELGEEHQDGFGQS
Nucleotide Sequence	CTGGTACAGCACGTTGTCACAGTGCTTGGTCCATTGGAGCACGGGCTCGAACTTGGAGAGGAGCACCAGGATGGCTTTGGGCAGTCG

CircID	chr19:13965645\|13965758
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MRISTRPWYSTLSQCLVHWSTGSNLERSTRMALGS
Nucleotide Sequence	ATGAGGATTTCCACCAGGCCCTGGTACAGCACGTTGTCACAGTGCTTGGTCCATTGGAGCACGGGCTCGAACTTGGAGAGGAGCACCAGGATGGCTTTGGGCAGT

CircID	chr19:13965645\|13965758
ORF Type	ORF3
Protein Length	37
Nucleotide Length	111
Protein Sequence	MPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPD
Nucleotide Sequence	CTGCCCAAAGCCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGTGACAACGTGCTGTACCAGGGCCTGGTGGAAATCCTCATTCCCGAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information