CircRNA Information

General Information
circRNA Basic Information
CircID chr19:14089189|14089358
Strand -
CircType exon
Host Gene ENSG00000141858.10;
Algorism CIRI2;
Sequence CCTCTCCTTGGCACTCTGAGGTCCCCGCTCGCCGTTAAGCTGGTGGTGCTGGGCACCTGCAGGACGGTCACTCTCGGGCACTTCAGAGCCCTCTGACACATCATCTTCTTCATCTTCATCTTCATCATCATCTTCTTCCTCTTCTTTCTCAAGTACTCGCTCTTCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:14089189|14089358 hsa-miR-29a-5p 0 0 1
chr19:14089189|14089358 hsa-miR-29a-3p 0 0 1
chr19:14089189|14089358 hsa-miR-29c-5p 0 0 1
chr19:14089189|14089358 hsa-miR-29c-3p 0 0 1
chr19:14089189|14089358 hsa-miR-539-5p 0 0 1
chr19:14089189|14089358 hsa-miR-539-3p 0 0 1
chr19:14089189|14089358 hsa-miR-573 0 1 1
chr19:14089189|14089358 hsa-miR-580-5p 0 0 1
chr19:14089189|14089358 hsa-miR-580-3p 0 0 1
chr19:14089189|14089358 hsa-miR-592 0 0 1
chr19:14089189|14089358 hsa-miR-597-5p 0 0 1
chr19:14089189|14089358 hsa-miR-597-3p 0 0 1
chr19:14089189|14089358 hsa-miR-657 0 0 1
chr19:14089189|14089358 hsa-miR-760 0 0 1
chr19:14089189|14089358 hsa-miR-1226-5p 0 0 1
chr19:14089189|14089358 hsa-miR-1226-3p 0 0 1
chr19:14089189|14089358 hsa-miR-1205 0 0 1
chr19:14089189|14089358 hsa-miR-1253 0 0 1
chr19:14089189|14089358 hsa-miR-1272 1 1 1
chr19:14089189|14089358 hsa-miR-337-5p 0 0 1
chr19:14089189|14089358 hsa-miR-220b 0 0 1
chr19:14089189|14089358 hsa-miR-1300 0 0 1
chr19:14089189|14089358 hsa-miR-29b 0 0 1
chr19:14089189|14089358 hsa-miR-764 0 1 0
chr19:14089189|14089358 hsa-miR-765 1 0 0
chr19:14089189|14089358 hsa-miR-1183 1 0 0
chr19:14089189|14089358 hsa-miR-1270 1 1 0
chr19:14089189|14089358 hsa-miR-3125 1 0 0
chr19:14089189|14089358 hsa-miR-3153 1 0 0
chr19:14089189|14089358 hsa-miR-3154 1 0 0
chr19:14089189|14089358 hsa-miR-3185 0 1 0
chr19:14089189|14089358 hsa-miR-4298 1 0 0
chr19:14089189|14089358 hsa-miR-4271 1 0 0
chr19:14089189|14089358 hsa-miR-3649 0 1 0
chr19:14089189|14089358 hsa-miR-3665 0 1 0
chr19:14089189|14089358 hsa-miR-3916 1 1 0
chr19:14089189|14089358 hsa-miR-4502 1 1 0
chr19:14089189|14089358 hsa-miR-4510 1 0 0
chr19:14089189|14089358 hsa-miR-4516 1 1 0
chr19:14089189|14089358 hsa-miR-4534 1 0 0
chr19:14089189|14089358 hsa-miR-4644 1 0 0
chr19:14089189|14089358 hsa-miR-4647 1 1 0
chr19:14089189|14089358 hsa-miR-4721 1 1 0
chr19:14089189|14089358 hsa-miR-4767 1 0 0
chr19:14089189|14089358 hsa-miR-5703 1 0 0
chr19:14089189|14089358 hsa-miR-6077 1 0 0
chr19:14089189|14089358 hsa-miR-6088 1 0 0
chr19:14089189|14089358 hsa-miR-6124 1 0 0
chr19:14089189|14089358 hsa-miR-6127 1 0 0
chr19:14089189|14089358 hsa-miR-6129 1 0 0
chr19:14089189|14089358 hsa-miR-6133 1 0 0
chr19:14089189|14089358 hsa-miR-8079 0 1 0
chr19:14089189|14089358 hsa-miR-9500 1 0 0
chr19:14089189|14089358 hsa-miR-7106-5p 1 0 0
chr19:14089189|14089358 hsa-miR-6894-5p 1 0 0
chr19:14089189|14089358 hsa-miR-766-5p 1 0 0
chr19:14089189|14089358 hsa-miR-6833-5p 1 0 0
chr19:14089189|14089358 hsa-miR-7847-3p 1 0 0
chr19:14089189|14089358 hsa-miR-6746-5p 1 0 0
chr19:14089189|14089358 hsa-miR-4709-3p 1 0 0
chr19:14089189|14089358 hsa-miR-3682-3p 1 0 0
chr19:14089189|14089358 hsa-miR-3605-5p 1 0 0
chr19:14089189|14089358 hsa-miR-6760-5p 1 1 0
chr19:14089189|14089358 hsa-miR-3065-3p 0 1 0
chr19:14089189|14089358 hsa-miR-3144-5p 0 1 0
chr19:14089189|14089358 hsa-miR-4740-3p 1 1 0
chr19:14089189|14089358 hsa-miR-6788-5p 1 0 0
chr19:14089189|14089358 hsa-miR-6780b-5p 1 0 0
chr19:14089189|14089358 hsa-miR-1909-3p 1 0 0
chr19:14089189|14089358 hsa-miR-4649-5p 1 1 0
chr19:14089189|14089358 hsa-miR-4725-3p 1 0 0
chr19:14089189|14089358 hsa-miR-4749-5p 1 1 0
chr19:14089189|14089358 hsa-miR-6729-5p 1 0 0
chr19:14089189|14089358 hsa-miR-6758-5p 1 0 0
chr19:14089189|14089358 hsa-miR-6856-5p 1 0 0
chr19:14089189|14089358 hsa-miR-550a-3-5p 1 0 0
chr19:14089189|14089358 hsa-miR-550a-5p 1 0 0
chr19:14089189|14089358 hsa-miR-6884-5p 1 0 0
chr19:14089189|14089358 hsa-miR-10394-5p 1 1 0
chr19:14089189|14089358 hsa-miR-4781-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:14089189|14089358
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MRSPLAVKLVVLGTCRTVTLGHFRAL
Nucleotide Sequence CTGAGGTCCCCGCTCGCCGTTAAGCTGGTGGTGCTGGGCACCTGCAGGACGGTCACTCTCGGGCACTTCAGAGCCCTCTGA
CircID chr19:14089189|14089358
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MQDGHSRALQSPLTHHLLHLHLHHHLLPLLSQVLALLH
Nucleotide Sequence CTGCAGGACGGTCACTCTCGGGCACTTCAGAGCCCTCTGACACATCATCTTCTTCATCTTCATCTTCATCATCATCTTCTTCCTCTTCTTTCTCAAGTACTCGCTCTTCTCCAC
CircID chr19:14089189|14089358
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MRKKRKKMMMKMKMKKMMCQRALKCPRVTVLQVPSTTSLTASGDLRVPRR
Nucleotide Sequence TTGAGAAAGAAGAGGAAGAAGATGATGATGAAGATGAAGATGAAGAAGATGATGTGTCAGAGGGCTCTGAAGTGCCCGAGAGTGACCGTCCTGCAGGTGCCCAGCACCACCAGCTTAACGGCGAGCGGGGACCTCAGAGTGCCAAGGAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab