CircRNA Information

General Information
circRNA Basic Information
CircID chr19:14091779|14092040
Strand -
CircType exon
Host Gene ENSG00000072062.12;
Algorism CIRI2;
Sequence ACAGGTTGAATCGCCCCCGCACCCACCCGGGGCCCCACCCCAGGCCTGAGAACTCCTCCTGGGATGGGGAGAAGTTATGAGAGGGGGAAATACGGGGATGAATGGGGTGGCTCCCCAGCGGCTCCCCACTTTTCTATTACGAGAGAAAAAAGCACAAATGAGAAAGTGGGGGAGAGGTGATGGACAGCTGACAGCTAAGCTGGAGGAGGGGCGCCCAGGATGGGGGAGGCGGAAGCTGGTGGGTGAGTAAAACAGGCAGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:14091779|14092040 hsa-miR-579-5p 0 0 1
chr19:14091779|14092040 hsa-miR-579-3p 0 0 1
chr19:14091779|14092040 hsa-miR-608 0 0 1
chr19:14091779|14092040 hsa-miR-636 0 0 1
chr19:14091779|14092040 hsa-miR-649 0 0 1
chr19:14091779|14092040 hsa-miR-661 0 0 1
chr19:14091779|14092040 hsa-miR-766-5p 0 0 1
chr19:14091779|14092040 hsa-miR-766-3p 0 0 1
chr19:14091779|14092040 hsa-miR-765 0 0 1
chr19:14091779|14092040 hsa-miR-675-5p 0 0 1
chr19:14091779|14092040 hsa-miR-675-3p 0 0 1
chr19:14091779|14092040 hsa-miR-744-5p 0 0 1
chr19:14091779|14092040 hsa-miR-744-3p 0 0 1
chr19:14091779|14092040 hsa-miR-665 0 0 1
chr19:14091779|14092040 hsa-miR-939-5p 0 0 1
chr19:14091779|14092040 hsa-miR-939-3p 0 0 1
chr19:14091779|14092040 hsa-miR-1226-5p 0 0 1
chr19:14091779|14092040 hsa-miR-1226-3p 0 0 1
chr19:14091779|14092040 hsa-miR-1266-5p 0 0 1
chr19:14091779|14092040 hsa-miR-1266-3p 0 0 1
chr19:14091779|14092040 hsa-miR-1281 1 0 1
chr19:14091779|14092040 hsa-miR-296-5p 0 0 1
chr19:14091779|14092040 hsa-miR-491-5p 0 0 1
chr19:14091779|14092040 hsa-miR-361-3p 0 0 1
chr19:14091779|14092040 hsa-miR-1207-3p 0 0 1
chr19:14091779|14092040 hsa-miR-342-5p 0 0 1
chr19:14091779|14092040 hsa-miR-218 0 0 1
chr19:14091779|14092040 hsa-miR-326 1 0 0
chr19:14091779|14092040 hsa-miR-935 1 0 0
chr19:14091779|14092040 hsa-miR-718 1 0 0
chr19:14091779|14092040 hsa-miR-4268 1 0 0
chr19:14091779|14092040 hsa-miR-4469 1 0 0
chr19:14091779|14092040 hsa-miR-4739 1 0 0
chr19:14091779|14092040 hsa-miR-5193 1 0 0
chr19:14091779|14092040 hsa-miR-9898 1 0 0
chr19:14091779|14092040 hsa-miR-9899 1 0 0
chr19:14091779|14092040 hsa-miR-197-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6749-3p 1 0 0
chr19:14091779|14092040 hsa-miR-18a-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6836-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6892-3p 1 0 0
chr19:14091779|14092040 hsa-miR-1225-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6762-3p 1 0 0
chr19:14091779|14092040 hsa-miR-3189-5p 1 0 0
chr19:14091779|14092040 hsa-miR-6849-3p 1 0 0
chr19:14091779|14092040 hsa-miR-7110-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6787-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6845-3p 1 0 0
chr19:14091779|14092040 hsa-miR-877-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6728-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6882-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4713-5p 1 0 0
chr19:14091779|14092040 hsa-miR-6884-3p 1 0 0
chr19:14091779|14092040 hsa-miR-1343-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4763-5p 1 0 0
chr19:14091779|14092040 hsa-miR-1247-5p 1 0 0
chr19:14091779|14092040 hsa-miR-6894-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6803-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6514-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6749-5p 1 0 0
chr19:14091779|14092040 hsa-miR-6821-3p 1 0 0
chr19:14091779|14092040 hsa-miR-5196-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4667-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6742-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6776-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4646-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6870-3p 1 0 0
chr19:14091779|14092040 hsa-miR-1237-3p 1 0 0
chr19:14091779|14092040 hsa-miR-1236-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6785-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4758-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6887-3p 1 0 0
chr19:14091779|14092040 hsa-miR-1224-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4749-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6880-3p 1 0 0
chr19:14091779|14092040 hsa-miR-1229-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4750-3p 1 0 0
chr19:14091779|14092040 hsa-miR-1249-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6729-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6789-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6780b-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6732-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6750-3p 1 0 0
chr19:14091779|14092040 hsa-miR-885-5p 1 0 0
chr19:14091779|14092040 hsa-miR-6756-5p 1 0 0
chr19:14091779|14092040 hsa-miR-3127-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4685-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4664-5p 1 0 0
chr19:14091779|14092040 hsa-miR-6791-3p 1 0 0
chr19:14091779|14092040 hsa-miR-2682-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6511a-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6756-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6784-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6792-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6862-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6810-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6829-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6511b-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6823-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6891-3p 1 0 0
chr19:14091779|14092040 hsa-miR-7114-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6744-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6783-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4691-5p 1 0 0
chr19:14091779|14092040 hsa-miR-6876-3p 1 0 0
chr19:14091779|14092040 hsa-miR-6827-3p 1 0 0
chr19:14091779|14092040 hsa-miR-4769-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:14091779|14092040
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MRTPPGMGRSYERGKYGDEWGGSPAAPHFSITREKSTNEKVGER
Nucleotide Sequence CTGAGAACTCCTCCTGGGATGGGGAGAAGTTATGAGAGGGGGAAATACGGGGATGAATGGGGTGGCTCCCCAGCGGCTCCCCACTTTTCTATTACGAGAGAAAAAAGCACAAATGAGAAAGTGGGGGAGAGGTGA
CircID chr19:14091779|14092040
ORF Type ORF2
Protein Length 63
Nucleotide Length 192
Protein Sequence MGWGEVMRGGNTGMNGVAPQRLPTFLLREKKAQMRKWGRGDGQLTAKLEEGRPGWGRRKLVGE
Nucleotide Sequence CTGGGATGGGGAGAAGTTATGAGAGGGGGAAATACGGGGATGAATGGGGTGGCTCCCCAGCGGCTCCCCACTTTTCTATTACGAGAGAAAAAAGCACAAATGAGAAAGTGGGGGAGAGGTGATGGACAGCTGACAGCTAAGCTGGAGGAGGGGCGCCCAGGATGGGGGAGGCGGAAGCTGGTGGGTGAGTAA
CircID chr19:14091779|14092040
ORF Type ORF3
Protein Length 40
Nucleotide Length 123
Protein Sequence MPVLLTHQLPPPPSWAPLLQLSCQLSITSPPLSHLCFFLS
Nucleotide Sequence CTGCCTGTTTTACTCACCCACCAGCTTCCGCCTCCCCCATCCTGGGCGCCCCTCCTCCAGCTTAGCTGTCAGCTGTCCATCACCTCTCCCCCACTTTCTCATTTGTGCTTTTTTCTCTCGTAA
CircID chr19:14091779|14092040
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MGSHPIHPRISPSHNFSPSQEEFSGLGWGPGWVRGRFNL
Nucleotide Sequence CTGGGGAGCCACCCCATTCATCCCCGTATTTCCCCCTCTCATAACTTCTCCCCATCCCAGGAGGAGTTCTCAGGCCTGGGGTGGGGCCCCGGGTGGGTGCGGGGGCGATTCAACCTG
CircID chr19:14091779|14092040
ORF Type ORF5
Protein Length 85
Nucleotide Length 255
Protein Sequence MFYSPTSFRLPHPGRPSSSLAVSCPSPLPHFLICAFFSRNRKVGSRWGATPFIPVFPPLITSPHPRRSSQAWGGAPGGCGGDSTC
Nucleotide Sequence CTGTTTTACTCACCCACCAGCTTCCGCCTCCCCCATCCTGGGCGCCCCTCCTCCAGCTTAGCTGTCAGCTGTCCATCACCTCTCCCCCACTTTCTCATTTGTGCTTTTTTCTCTCGTAATAGAAAAGTGGGGAGCCGCTGGGGAGCCACCCCATTCATCCCCGTATTTCCCCCTCTCATAACTTCTCCCCATCCCAGGAGGAGTTCTCAGGCCTGGGGTGGGGCCCCGGGTGGGTGCGGGGGCGATTCAACCTGT
CircID chr19:14091779|14092040
ORF Type ORF6
Protein Length 39
Nucleotide Length 120
Protein Sequence MSAVHHLSPTFSFVLFSLVIEKWGAAGEPPHSSPYFPLS
Nucleotide Sequence CTGTCAGCTGTCCATCACCTCTCCCCCACTTTCTCATTTGTGCTTTTTTCTCTCGTAATAGAAAAGTGGGGAGCCGCTGGGGAGCCACCCCATTCATCCCCGTATTTCCCCCTCTCATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab