CircRNA Information

General Information
circRNA Basic Information
CircID chr19:1432547|1432681
Strand +
CircType exon
Host Gene ENSG00000071626.15;
Algorism CIRI2;
Sequence CATAGGGGAAGTCTGGCTGAGCTGTCGGGGGCTTGCTCATGTCCGGGGCAGCCTGAGACGGAGGCGGTGGGAAAGCCAGAGGTGCTGCCCCGGGAGTGGCTGGTGGAGGAGGAACCCCCGGAGGGGCAAACTGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:1432547|1432681 hsa-miR-149-5p 0 0 1
chr19:1432547|1432681 hsa-miR-149-3p 0 0 1
chr19:1432547|1432681 hsa-miR-484 0 0 1
chr19:1432547|1432681 hsa-miR-617 0 0 1
chr19:1432547|1432681 hsa-miR-1226-5p 0 0 1
chr19:1432547|1432681 hsa-miR-1226-3p 0 0 1
chr19:1432547|1432681 hsa-miR-1266-5p 0 0 1
chr19:1432547|1432681 hsa-miR-1266-3p 0 0 1
chr19:1432547|1432681 hsa-miR-1281 0 0 1
chr19:1432547|1432681 hsa-miR-486-3p 0 0 1
chr19:1432547|1432681 hsa-miR-1224-3p 0 0 1
chr19:1432547|1432681 hsa-miR-188-3p 0 0 1
chr19:1432547|1432681 hsa-miR-324-3p 0 0 1
chr19:1432547|1432681 hsa-miR-1260 0 0 1
chr19:1432547|1432681 hsa-miR-1280 0 0 1
chr19:1432547|1432681 hsa-miR-326 1 0 0
chr19:1432547|1432681 hsa-miR-637 1 0 0
chr19:1432547|1432681 hsa-miR-1260a 0 1 0
chr19:1432547|1432681 hsa-miR-1470 1 0 0
chr19:1432547|1432681 hsa-miR-1260b 0 1 0
chr19:1432547|1432681 hsa-miR-4326 0 1 0
chr19:1432547|1432681 hsa-miR-3917 0 1 0
chr19:1432547|1432681 hsa-miR-3943 1 1 0
chr19:1432547|1432681 hsa-miR-4442 0 1 0
chr19:1432547|1432681 hsa-miR-4449 1 1 0
chr19:1432547|1432681 hsa-miR-4794 1 0 0
chr19:1432547|1432681 hsa-miR-5193 0 1 0
chr19:1432547|1432681 hsa-miR-3157-5p 0 1 0
chr19:1432547|1432681 hsa-miR-210-5p 1 0 0
chr19:1432547|1432681 hsa-miR-1225-3p 1 0 0
chr19:1432547|1432681 hsa-miR-3189-5p 1 0 0
chr19:1432547|1432681 hsa-miR-6858-3p 1 0 0
chr19:1432547|1432681 hsa-miR-5001-3p 1 0 0
chr19:1432547|1432681 hsa-miR-3191-5p 1 0 0
chr19:1432547|1432681 hsa-miR-4787-5p 1 0 0
chr19:1432547|1432681 hsa-miR-6769a-3p 1 0 0
chr19:1432547|1432681 hsa-miR-4646-3p 1 0 0
chr19:1432547|1432681 hsa-miR-4707-5p 1 0 0
chr19:1432547|1432681 hsa-miR-1236-3p 0 1 0
chr19:1432547|1432681 hsa-miR-6887-3p 1 1 0
chr19:1432547|1432681 hsa-miR-3160-5p 1 0 0
chr19:1432547|1432681 hsa-miR-6886-3p 1 0 0
chr19:1432547|1432681 hsa-miR-4749-3p 1 0 0
chr19:1432547|1432681 hsa-miR-328-3p 1 0 0
chr19:1432547|1432681 hsa-miR-6795-3p 1 0 0
chr19:1432547|1432681 hsa-miR-4433a-5p 1 0 0
chr19:1432547|1432681 hsa-miR-4433b-5p 1 0 0
chr19:1432547|1432681 hsa-miR-1249-3p 1 0 0
chr19:1432547|1432681 hsa-miR-329-5p 1 0 0
chr19:1432547|1432681 hsa-miR-196b-3p 0 1 0
chr19:1432547|1432681 hsa-miR-6754-3p 0 1 0
chr19:1432547|1432681 hsa-miR-6836-5p 1 0 0
chr19:1432547|1432681 hsa-miR-10396b-3p 1 0 0
chr19:1432547|1432681 hsa-miR-6792-3p 0 1 0
chr19:1432547|1432681 hsa-miR-3085-3p 1 0 0
chr19:1432547|1432681 hsa-miR-330-5p 1 0 0
chr19:1432547|1432681 hsa-miR-4691-5p 1 0 0
chr19:1432547|1432681 hsa-miR-6827-3p 0 1 0
chr19:1432547|1432681 hsa-miR-6824-3p 1 1 0
chr19:1432547|1432681 hsa-miR-487a-5p 1 0 0
chr19:1432547|1432681 hsa-miR-340-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:1432547|1432681
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MAELSGACSCPGQPETEAVGKPEVLPREWLVEEEPPEGQTD
Nucleotide Sequence CTGGCTGAGCTGTCGGGGGCTTGCTCATGTCCGGGGCAGCCTGAGACGGAGGCGGTGGGAAAGCCAGAGGTGCTGCCCCGGGAGTGGCTGGTGGAGGAGGAACCCCCGGAGGGGCAAACTGAT

CircID chr19:1432547|1432681
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MSCRGLAHVRGSLRRRRWESQRCCPGSGWWRRNPRRGKL
Nucleotide Sequence CTGAGCTGTCGGGGGCTTGCTCATGTCCGGGGCAGCCTGAGACGGAGGCGGTGGGAAAGCCAGAGGTGCTGCCCCGGGAGTGGCTGGTGGAGGAGGAACCCCCGGAGGGGCAAACTG

CircID chr19:1432547|1432681
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MPLRGFLLHQPLPGQHLWLSHRLRLRLPRT
Nucleotide Sequence TTGCCCCTCCGGGGGTTCCTCCTCCACCAGCCACTCCCGGGGCAGCACCTCTGGCTTTCCCACCGCCTCCGTCTCAGGCTGCCCCGGACATGA

CircID chr19:1432547|1432681
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MAFPPPPSQAAPDMSKPPTAQPDFPY
Nucleotide Sequence CTGGCTTTCCCACCGCCTCCGTCTCAGGCTGCCCCGGACATGAGCAAGCCCCCGACAGCTCAGCCAGACTTCCCCTAT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites