CircRNA Information

General Information
circRNA Basic Information
CircID chr19:14410310|14411089
Strand +
CircType exon
Host Gene ENSG00000123136.13;
Algorism CIRI2;
Sequence CCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTAGACATGCGGCGGGATGTGCAGGAGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:14410310|14411089 hsa-miR-17-5p 0 0 1
chr19:14410310|14411089 hsa-miR-17-3p 0 0 1
chr19:14410310|14411089 hsa-miR-20a-5p 0 0 1
chr19:14410310|14411089 hsa-miR-20a-3p 0 0 1
chr19:14410310|14411089 hsa-miR-22-5p 0 0 1
chr19:14410310|14411089 hsa-miR-22-3p 0 0 1
chr19:14410310|14411089 hsa-miR-23a-5p 0 0 1
chr19:14410310|14411089 hsa-miR-23a-3p 0 0 1
chr19:14410310|14411089 hsa-miR-93-5p 0 0 1
chr19:14410310|14411089 hsa-miR-93-3p 0 0 1
chr19:14410310|14411089 hsa-miR-106a-5p 0 0 1
chr19:14410310|14411089 hsa-miR-106a-3p 0 0 1
chr19:14410310|14411089 hsa-miR-23b-5p 0 0 1
chr19:14410310|14411089 hsa-miR-23b-3p 0 0 1
chr19:14410310|14411089 hsa-miR-106b-5p 0 0 1
chr19:14410310|14411089 hsa-miR-106b-3p 0 0 1
chr19:14410310|14411089 hsa-miR-302a-5p 0 0 1
chr19:14410310|14411089 hsa-miR-302a-3p 0 0 1
chr19:14410310|14411089 hsa-miR-302b-5p 0 0 1
chr19:14410310|14411089 hsa-miR-302b-3p 0 0 1
chr19:14410310|14411089 hsa-miR-302c-5p 0 0 1
chr19:14410310|14411089 hsa-miR-302c-3p 0 0 1
chr19:14410310|14411089 hsa-miR-302d-5p 0 0 1
chr19:14410310|14411089 hsa-miR-302d-3p 0 0 1
chr19:14410310|14411089 hsa-miR-372-5p 0 0 1
chr19:14410310|14411089 hsa-miR-372-3p 0 0 1
chr19:14410310|14411089 hsa-miR-373-5p 0 0 1
chr19:14410310|14411089 hsa-miR-373-3p 0 0 1
chr19:14410310|14411089 hsa-miR-20b-5p 0 0 1
chr19:14410310|14411089 hsa-miR-20b-3p 0 0 1
chr19:14410310|14411089 hsa-miR-520e-5p 0 0 1
chr19:14410310|14411089 hsa-miR-520e-3p 0 0 1
chr19:14410310|14411089 hsa-miR-520f-5p 0 0 1
chr19:14410310|14411089 hsa-miR-520f-3p 0 0 1
chr19:14410310|14411089 hsa-miR-520b-5p 0 0 1
chr19:14410310|14411089 hsa-miR-520b-3p 0 0 1
chr19:14410310|14411089 hsa-miR-519d-5p 0 0 1
chr19:14410310|14411089 hsa-miR-519d-3p 0 0 1
chr19:14410310|14411089 hsa-miR-520g-5p 0 0 1
chr19:14410310|14411089 hsa-miR-520g-3p 0 0 1
chr19:14410310|14411089 hsa-miR-520h 0 0 1
chr19:14410310|14411089 hsa-miR-766-5p 0 0 1
chr19:14410310|14411089 hsa-miR-766-3p 0 0 1
chr19:14410310|14411089 hsa-miR-302e 0 0 1
chr19:14410310|14411089 hsa-miR-127-5p 0 0 1
chr19:14410310|14411089 hsa-miR-339-3p 0 0 1
chr19:14410310|14411089 hsa-miR-338-3p 0 0 1
chr19:14410310|14411089 hsa-miR-520d-3p 0 0 1
chr19:14410310|14411089 hsa-miR-520a-3p 0 0 1
chr19:14410310|14411089 hsa-miR-520c-3p 0 0 1
chr19:14410310|14411089 hsa-miR-602 1 0 0
chr19:14410310|14411089 hsa-miR-1539 1 0 0
chr19:14410310|14411089 hsa-miR-1976 1 0 0
chr19:14410310|14411089 hsa-miR-4656 1 0 0
chr19:14410310|14411089 hsa-miR-187-3p 0 1 0
chr19:14410310|14411089 hsa-miR-486-5p 1 0 0
chr19:14410310|14411089 hsa-miR-138-2-3p 0 1 0
chr19:14410310|14411089 hsa-let-7c-3p 1 0 0
chr19:14410310|14411089 hsa-miR-4793-3p 1 0 0
chr19:14410310|14411089 hsa-miR-1237-3p 1 0 0
chr19:14410310|14411089 hsa-miR-6731-3p 0 1 0
chr19:14410310|14411089 hsa-miR-3620-5p 1 0 0
chr19:14410310|14411089 hsa-miR-6792-3p 1 0 0
chr19:14410310|14411089 hsa-miR-3928-5p 0 1 0
chr19:14410310|14411089 hsa-miR-6783-3p 1 0 0
chr19:14410310|14411089 hsa-miR-10394-5p 1 0 0
chr19:14410310|14411089 hsa-miR-6806-3p 0 1 0
chr19:14410310|14411089 hsa-miR-526b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:14410310|14411089
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQE
Nucleotide Sequence CTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTAGACATGCGGCGGGATGTGCAGGAG

CircID chr19:14410310|14411089
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MSSCSSILSHSSSTKCFTFFRLKLLFRTSARMRPG
Nucleotide Sequence ATGTCTAGCTGCTCCAGCATCTTGTCACACTCGTCCAGCACAAAGTGCTTCACATTCTTTAGGCTGAAGCTCCTATTCCGCACGAGCGCCAGGATGCGGCCCGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites