CircRNA Information

General Information
circRNA Basic Information
CircID chr19:14515416|14515568
Strand +
CircType exon
Host Gene ENSG00000132002.6;
Algorism CIRI2;
Sequence CTGCAGTCTTGATTCCCAGACCCTGTACACTCCTCCTTTTCTGTTGTGTGATCAGTTTGTGCTTTATTCTGTATTTGTCTCCCATGTCTTGCTCTTCTCCTGGAGAATTCTGTCTTCTCTTTGGCCATCTCAAATTGAGAACCTAAACTATTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:14515416|14515568 hsa-miR-122-5p 0 0 1
chr19:14515416|14515568 hsa-miR-122-3p 0 0 1
chr19:14515416|14515568 hsa-miR-143-5p 0 0 1
chr19:14515416|14515568 hsa-miR-143-3p 0 0 1
chr19:14515416|14515568 hsa-miR-377-5p 0 0 1
chr19:14515416|14515568 hsa-miR-377-3p 0 0 1
chr19:14515416|14515568 hsa-miR-641 0 0 1
chr19:14515416|14515568 hsa-miR-766-5p 0 0 1
chr19:14515416|14515568 hsa-miR-766-3p 0 0 1
chr19:14515416|14515568 hsa-miR-765 1 1 1
chr19:14515416|14515568 hsa-miR-665 0 0 1
chr19:14515416|14515568 hsa-miR-1182 0 1 1
chr19:14515416|14515568 hsa-miR-1253 0 0 1
chr19:14515416|14515568 hsa-miR-513c-5p 0 0 1
chr19:14515416|14515568 hsa-miR-513c-3p 0 0 1
chr19:14515416|14515568 hsa-miR-509-3-5p 0 0 1
chr19:14515416|14515568 hsa-miR-509-5p 0 0 1
chr19:14515416|14515568 hsa-miR-515-5p 0 0 1
chr19:14515416|14515568 hsa-miR-198 1 0 0
chr19:14515416|14515568 hsa-miR-620 1 0 0
chr19:14515416|14515568 hsa-miR-648 1 0 0
chr19:14515416|14515568 hsa-miR-1324 0 1 0
chr19:14515416|14515568 hsa-miR-3154 1 0 0
chr19:14515416|14515568 hsa-miR-3197 1 0 0
chr19:14515416|14515568 hsa-miR-4314 0 1 0
chr19:14515416|14515568 hsa-miR-4271 1 0 0
chr19:14515416|14515568 hsa-miR-4487 1 0 0
chr19:14515416|14515568 hsa-miR-4516 1 1 0
chr19:14515416|14515568 hsa-miR-4688 1 0 0
chr19:14515416|14515568 hsa-miR-4689 1 0 0
chr19:14515416|14515568 hsa-miR-6165 1 0 0
chr19:14515416|14515568 hsa-miR-8085 1 0 0
chr19:14515416|14515568 hsa-miR-12115 1 0 0
chr19:14515416|14515568 hsa-miR-12118 0 1 0
chr19:14515416|14515568 hsa-miR-4435 0 1 0
chr19:14515416|14515568 hsa-miR-4433b-3p 1 1 0
chr19:14515416|14515568 hsa-miR-504-3p 1 0 0
chr19:14515416|14515568 hsa-miR-4433a-3p 1 0 0
chr19:14515416|14515568 hsa-miR-6799-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6728-5p 1 0 0
chr19:14515416|14515568 hsa-miR-3622a-5p 1 0 0
chr19:14515416|14515568 hsa-miR-3926 1 1 0
chr19:14515416|14515568 hsa-miR-6757-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6746-5p 1 0 0
chr19:14515416|14515568 hsa-miR-3622b-5p 1 0 0
chr19:14515416|14515568 hsa-miR-197-5p 1 0 0
chr19:14515416|14515568 hsa-miR-3126-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6760-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6782-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6810-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6740-5p 1 0 0
chr19:14515416|14515568 hsa-miR-4732-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6847-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6878-5p 1 0 0
chr19:14515416|14515568 hsa-miR-597-3p 0 1 0
chr19:14515416|14515568 hsa-miR-3177-3p 1 0 0
chr19:14515416|14515568 hsa-miR-942-3p 1 0 0
chr19:14515416|14515568 hsa-miR-1244 1 1 0
chr19:14515416|14515568 hsa-miR-1233-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6778-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6865-5p 1 1 0
chr19:14515416|14515568 hsa-miR-6815-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6851-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6780a-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6780b-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6795-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6858-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6887-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6889-5p 1 0 0
chr19:14515416|14515568 hsa-miR-4769-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6731-5p 1 0 0
chr19:14515416|14515568 hsa-miR-6856-5p 1 0 0
chr19:14515416|14515568 hsa-miR-4665-5p 1 0 0
chr19:14515416|14515568 hsa-miR-4700-5p 0 1 0
chr19:14515416|14515568 hsa-miR-10398-3p 1 0 0
chr19:14515416|14515568 hsa-miR-3173-3p 0 1 0
chr19:14515416|14515568 hsa-miR-4646-5p 0 1 0
chr19:14515416|14515568 hsa-miR-6891-5p 0 1 0
chr19:14515416|14515568 hsa-miR-3059-3p 1 1 0
chr19:14515416|14515568 hsa-miR-582-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:14515416|14515568
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MYTPPFLLCDQFVLYSVFVSHVLLFSWRILSSLWPSQIENLNY
Nucleotide Sequence CTGTACACTCCTCCTTTTCTGTTGTGTGATCAGTTTGTGCTTTATTCTGTATTTGTCTCCCATGTCTTGCTCTTCTCCTGGAGAATTCTGTCTTCTCTTTGGCCATCTCAAATTGAGAACCTAAACTAT
CircID chr19:14515416|14515568
ORF Type ORF2
Protein Length 45
Nucleotide Length 138
Protein Sequence MIPRPCTLLLFCCVISLCFILYLSPMSCSSPGEFCLLFGHLKLRT
Nucleotide Sequence TTGATTCCCAGACCCTGTACACTCCTCCTTTTCTGTTGTGTGATCAGTTTGTGCTTTATTCTGTATTTGTCTCCCATGTCTTGCTCTTCTCCTGGAGAATTCTGTCTTCTCTTTGGCCATCTCAAATTGAGAACCTAA
CircID chr19:14515416|14515568
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MAKEKTEFSRRRARHGRQIQNKAQTDHTTEKEECTGSGNQDC
Nucleotide Sequence ATGGCCAAAGAGAAGACAGAATTCTCCAGGAGAAGAGCAAGACATGGGAGACAAATACAGAATAAAGCACAAACTGATCACACAACAGAAAAGGAGGAGTGTACAGGGTCTGGGAATCAAGACTGC
CircID chr19:14515416|14515568
ORF Type ORF4
Protein Length 44
Nucleotide Length 132
Protein Sequence MRWPKRRQNSPGEEQDMGDKYRIKHKLITQQKRRSVQGLGIKTA
Nucleotide Sequence TTGAGATGGCCAAAGAGAAGACAGAATTCTCCAGGAGAAGAGCAAGACATGGGAGACAAATACAGAATAAAGCACAAACTGATCACACAACAGAAAAGGAGGAGTGTACAGGGTCTGGGAATCAAGACTGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab