CircRNA Information

General Information
circRNA Basic Information
CircID chr19:14515655|14515834
Strand -
CircType exon
Host Gene ENSG00000132002.6;
Algorism CIRI2;
Sequence TGGAGGTGGATGTGGGCCCATCCCGGGAGGGCTGCCAGACCCAGTGGGGCAGACTGGAATGCCTTTTCCTGCTGTTCCCACCACCTGATGCCCTATAGCTCGAAAAACCACTGAAGTCTAGTGTGCGACTTTGAAAGATTGTAATATATGCTCTGGAAAACATTCAGCAGTACGAAAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:14515655|14515834 hsa-miR-214-5p 0 0 1
chr19:14515655|14515834 hsa-miR-214-3p 0 0 1
chr19:14515655|14515834 hsa-miR-346 0 0 1
chr19:14515655|14515834 hsa-miR-520g-5p 0 0 1
chr19:14515655|14515834 hsa-miR-520g-3p 0 0 1
chr19:14515655|14515834 hsa-miR-520h 0 0 1
chr19:14515655|14515834 hsa-miR-607 0 0 1
chr19:14515655|14515834 hsa-miR-622 0 0 1
chr19:14515655|14515834 hsa-miR-656-5p 0 0 1
chr19:14515655|14515834 hsa-miR-656-3p 0 0 1
chr19:14515655|14515834 hsa-miR-541-5p 0 0 1
chr19:14515655|14515834 hsa-miR-541-3p 0 0 1
chr19:14515655|14515834 hsa-miR-1292-5p 0 0 1
chr19:14515655|14515834 hsa-miR-1292-3p 0 0 1
chr19:14515655|14515834 hsa-miR-140-5p 0 0 1
chr19:14515655|14515834 hsa-miR-125a-3p 0 0 1
chr19:14515655|14515834 hsa-miR-145-5p 0 0 1
chr19:14515655|14515834 hsa-miR-296-5p 0 0 1
chr19:14515655|14515834 hsa-miR-885-3p 0 0 1
chr19:14515655|14515834 hsa-miR-193a-5p 0 0 1
chr19:14515655|14515834 hsa-miR-654-5p 0 0 1
chr19:14515655|14515834 hsa-miR-525-5p 0 0 1
chr19:14515655|14515834 hsa-miR-324-3p 0 0 1
chr19:14515655|14515834 hsa-miR-520a-5p 0 0 1
chr19:14515655|14515834 hsa-miR-608 1 0 0
chr19:14515655|14515834 hsa-miR-4298 1 0 0
chr19:14515655|14515834 hsa-miR-378h 1 0 0
chr19:14515655|14515834 hsa-miR-8089 1 0 0
chr19:14515655|14515834 hsa-miR-4732-5p 1 0 0
chr19:14515655|14515834 hsa-miR-4787-5p 1 0 0
chr19:14515655|14515834 hsa-miR-202-3p 1 0 0
chr19:14515655|14515834 hsa-miR-6769b-5p 1 0 0
chr19:14515655|14515834 hsa-miR-6775-5p 1 0 0
chr19:14515655|14515834 hsa-miR-6769a-5p 1 0 0
chr19:14515655|14515834 hsa-miR-6879-5p 1 0 0
chr19:14515655|14515834 hsa-miR-4632-5p 1 0 0
chr19:14515655|14515834 hsa-miR-4685-5p 1 0 0
chr19:14515655|14515834 hsa-miR-6750-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:14515655|14515834
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MWAHPGRAARPSGADWNAFSCCSHHLMPYSSKNH
Nucleotide Sequence ATGTGGGCCCATCCCGGGAGGGCTGCCAGACCCAGTGGGGCAGACTGGAATGCCTTTTCCTGCTGTTCCCACCACCTGATGCCCTATAGCTCGAAAAACCACTGA

CircID chr19:14515655|14515834
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MLNVFQSIYYNLSKSHTRLQWFFEL
Nucleotide Sequence CTGCTGAATGTTTTCCAGAGCATATATTACAATCTTTCAAAGTCGCACACTAGACTTCAGTGGTTTTTCGAGCTATAG

CircID chr19:14515655|14515834
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MFSRAYITIFQSRTLDFSGFSSYRASGGGNSRKRHSSLPHWVWQPSRDGPTSTS
Nucleotide Sequence ATGTTTTCCAGAGCATATATTACAATCTTTCAAAGTCGCACACTAGACTTCAGTGGTTTTTCGAGCTATAGGGCATCAGGTGGTGGGAACAGCAGGAAAAGGCATTCCAGTCTGCCCCACTGGGTCTGGCAGCCCTCCCGGGATGGGCCCACATCCACCTCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites