CircRNA Information

General Information
circRNA Basic Information
CircID chr19:15115612|15115921
Strand -
CircType exon
Host Gene ENSG00000105135.14;
Algorism CIRI2;
Sequence CTGCTCCCGAGAAATCTGTGTCCAGCCAGCATCATTCCCTACCAAGGCCATCACTGGGATCTACAGGAAGATGATGAAGGCAGGCCGCAGCCTTCAGCCCCATGGCTTGGCCAGCCAGAGGACAGAGACAGGGATAGGGCCTCTGCCAGAGAGGAGGCTCCCTCCCCACCTCAGCCCACCCCTGGTGACATCTCCCAGAACCCCAGGCCCTAAGCTTCCCTCAGGCCAGCCCAGTCACCTTGTGTCTGACGAATGTATCAAATTCGATGAGGCTGTAGCCAAAAGCTCCGTCCCCAAACAGGCACCAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:15115612|15115921 hsa-miR-181c-5p 0 0 1
chr19:15115612|15115921 hsa-miR-181c-3p 0 0 1
chr19:15115612|15115921 hsa-miR-205-5p 0 0 1
chr19:15115612|15115921 hsa-miR-205-3p 0 0 1
chr19:15115612|15115921 hsa-miR-134-5p 0 0 1
chr19:15115612|15115921 hsa-miR-134-3p 0 0 1
chr19:15115612|15115921 hsa-miR-149-5p 0 0 1
chr19:15115612|15115921 hsa-miR-149-3p 0 0 1
chr19:15115612|15115921 hsa-miR-184 0 0 1
chr19:15115612|15115921 hsa-miR-326 0 0 1
chr19:15115612|15115921 hsa-miR-181d-5p 0 0 1
chr19:15115612|15115921 hsa-miR-181d-3p 0 0 1
chr19:15115612|15115921 hsa-miR-593-5p 0 0 1
chr19:15115612|15115921 hsa-miR-593-3p 0 0 1
chr19:15115612|15115921 hsa-miR-604 0 0 1
chr19:15115612|15115921 hsa-miR-608 1 1 1
chr19:15115612|15115921 hsa-miR-624-5p 0 0 1
chr19:15115612|15115921 hsa-miR-624-3p 0 0 1
chr19:15115612|15115921 hsa-miR-661 1 1 1
chr19:15115612|15115921 hsa-miR-1296-5p 0 0 1
chr19:15115612|15115921 hsa-miR-1296-3p 0 0 1
chr19:15115612|15115921 hsa-miR-541-5p 0 0 1
chr19:15115612|15115921 hsa-miR-541-3p 0 0 1
chr19:15115612|15115921 hsa-miR-939-5p 0 0 1
chr19:15115612|15115921 hsa-miR-939-3p 0 0 1
chr19:15115612|15115921 hsa-miR-1226-5p 0 0 1
chr19:15115612|15115921 hsa-miR-1226-3p 0 0 1
chr19:15115612|15115921 hsa-miR-1234-3p 0 0 1
chr19:15115612|15115921 hsa-miR-1322 0 1 1
chr19:15115612|15115921 hsa-miR-1324 0 0 1
chr19:15115612|15115921 hsa-miR-1234 0 0 1
chr19:15115612|15115921 hsa-miR-486-5p 0 0 1
chr19:15115612|15115921 hsa-miR-491-5p 0 0 1
chr19:15115612|15115921 hsa-miR-339-5p 0 0 1
chr19:15115612|15115921 hsa-miR-654-5p 0 0 1
chr19:15115612|15115921 hsa-miR-188-5p 0 0 1
chr19:15115612|15115921 hsa-miR-330-5p 0 0 1
chr19:15115612|15115921 hsa-miR-1274a 0 0 1
chr19:15115612|15115921 hsa-miR-550 0 0 1
chr19:15115612|15115921 hsa-miR-1274b 0 0 1
chr19:15115612|15115921 hsa-miR-181a 0 0 1
chr19:15115612|15115921 hsa-miR-181b 0 0 1
chr19:15115612|15115921 hsa-miR-762 1 1 0
chr19:15115612|15115921 hsa-miR-760 1 0 0
chr19:15115612|15115921 hsa-miR-1182 1 0 0
chr19:15115612|15115921 hsa-miR-1268a 1 0 0
chr19:15115612|15115921 hsa-miR-548q 1 0 0
chr19:15115612|15115921 hsa-miR-2861 1 1 0
chr19:15115612|15115921 hsa-miR-3132 1 0 0
chr19:15115612|15115921 hsa-miR-3170 0 1 0
chr19:15115612|15115921 hsa-miR-3176 0 1 0
chr19:15115612|15115921 hsa-miR-3183 0 1 0
chr19:15115612|15115921 hsa-miR-4314 0 1 0
chr19:15115612|15115921 hsa-miR-4322 1 0 0
chr19:15115612|15115921 hsa-miR-3909 0 1 0
chr19:15115612|15115921 hsa-miR-3911 1 0 0
chr19:15115612|15115921 hsa-miR-3936 1 0 0
chr19:15115612|15115921 hsa-miR-1268b 1 0 0
chr19:15115612|15115921 hsa-miR-4421 1 0 0
chr19:15115612|15115921 hsa-miR-4430 0 1 0
chr19:15115612|15115921 hsa-miR-4457 0 1 0
chr19:15115612|15115921 hsa-miR-4462 1 0 0
chr19:15115612|15115921 hsa-miR-4463 1 0 0
chr19:15115612|15115921 hsa-miR-3689c 1 0 0
chr19:15115612|15115921 hsa-miR-4488 1 0 0
chr19:15115612|15115921 hsa-miR-4498 1 1 0
chr19:15115612|15115921 hsa-miR-4505 1 1 0
chr19:15115612|15115921 hsa-miR-4507 1 1 0
chr19:15115612|15115921 hsa-miR-1587 1 1 0
chr19:15115612|15115921 hsa-miR-4651 1 1 0
chr19:15115612|15115921 hsa-miR-4656 1 1 0
chr19:15115612|15115921 hsa-miR-4730 0 1 0
chr19:15115612|15115921 hsa-miR-4741 1 0 0
chr19:15115612|15115921 hsa-miR-4752 1 1 0
chr19:15115612|15115921 hsa-miR-5093 1 1 0
chr19:15115612|15115921 hsa-miR-5787 1 0 0
chr19:15115612|15115921 hsa-miR-6085 1 0 0
chr19:15115612|15115921 hsa-miR-6088 1 0 0
chr19:15115612|15115921 hsa-miR-6127 1 0 0
chr19:15115612|15115921 hsa-miR-6860 1 0 0
chr19:15115612|15115921 hsa-miR-8089 1 0 0
chr19:15115612|15115921 hsa-miR-12119 1 0 0
chr19:15115612|15115921 hsa-miR-12128 1 0 0
chr19:15115612|15115921 hsa-miR-141-5p 0 1 0
chr19:15115612|15115921 hsa-miR-150-3p 1 0 0
chr19:15115612|15115921 hsa-miR-4433b-3p 1 0 0
chr19:15115612|15115921 hsa-miR-7155-5p 0 1 0
chr19:15115612|15115921 hsa-miR-6747-3p 0 1 0
chr19:15115612|15115921 hsa-miR-4433a-3p 1 0 0
chr19:15115612|15115921 hsa-miR-671-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6825-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6799-5p 1 0 0
chr19:15115612|15115921 hsa-miR-8071 1 0 0
chr19:15115612|15115921 hsa-miR-1227-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6089 1 0 0
chr19:15115612|15115921 hsa-miR-3192-5p 1 1 0
chr19:15115612|15115921 hsa-miR-7160-5p 0 1 0
chr19:15115612|15115921 hsa-miR-6842-3p 0 1 0
chr19:15115612|15115921 hsa-miR-3187-3p 1 0 0
chr19:15115612|15115921 hsa-miR-4655-5p 1 0 0
chr19:15115612|15115921 hsa-miR-3180-3p 1 1 0
chr19:15115612|15115921 hsa-miR-6793-5p 1 0 0
chr19:15115612|15115921 hsa-miR-185-3p 1 0 0
chr19:15115612|15115921 hsa-miR-6829-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6732-5p 1 0 0
chr19:15115612|15115921 hsa-miR-23a-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6798-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6782-5p 1 1 0
chr19:15115612|15115921 hsa-miR-6810-5p 0 1 0
chr19:15115612|15115921 hsa-miR-6786-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6852-5p 1 1 0
chr19:15115612|15115921 hsa-miR-6740-5p 1 1 0
chr19:15115612|15115921 hsa-miR-4763-5p 0 1 0
chr19:15115612|15115921 hsa-miR-3944-3p 1 0 0
chr19:15115612|15115921 hsa-miR-1229-5p 1 0 0
chr19:15115612|15115921 hsa-miR-193b-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6784-5p 1 0 0
chr19:15115612|15115921 hsa-miR-4640-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6753-5p 1 1 0
chr19:15115612|15115921 hsa-miR-296-3p 1 0 0
chr19:15115612|15115921 hsa-miR-6823-5p 1 0 0
chr19:15115612|15115921 hsa-miR-3191-5p 0 1 0
chr19:15115612|15115921 hsa-miR-92b-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6749-5p 1 1 0
chr19:15115612|15115921 hsa-miR-6818-3p 0 1 0
chr19:15115612|15115921 hsa-miR-4787-5p 1 0 0
chr19:15115612|15115921 hsa-miR-4638-3p 0 1 0
chr19:15115612|15115921 hsa-miR-6824-5p 1 0 0
chr19:15115612|15115921 hsa-miR-146b-3p 1 0 0
chr19:15115612|15115921 hsa-miR-7162-3p 0 1 0
chr19:15115612|15115921 hsa-miR-3191-3p 1 1 0
chr19:15115612|15115921 hsa-miR-208a-5p 0 1 0
chr19:15115612|15115921 hsa-miR-4761-5p 0 1 0
chr19:15115612|15115921 hsa-miR-4746-5p 1 0 0
chr19:15115612|15115921 hsa-miR-454-5p 0 1 0
chr19:15115612|15115921 hsa-miR-6748-3p 0 1 0
chr19:15115612|15115921 hsa-miR-1207-5p 1 0 0
chr19:15115612|15115921 hsa-miR-1233-5p 1 0 0
chr19:15115612|15115921 hsa-miR-3689b-3p 1 0 0
chr19:15115612|15115921 hsa-miR-4763-3p 1 0 0
chr19:15115612|15115921 hsa-miR-6769b-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6812-5p 1 1 0
chr19:15115612|15115921 hsa-miR-6816-5p 1 0 0
chr19:15115612|15115921 hsa-miR-1343-5p 1 0 0
chr19:15115612|15115921 hsa-miR-3180 1 1 0
chr19:15115612|15115921 hsa-miR-5001-5p 1 1 0
chr19:15115612|15115921 hsa-miR-6726-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6737-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6752-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6754-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6756-5p 1 1 0
chr19:15115612|15115921 hsa-miR-6769a-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6813-5p 1 1 0
chr19:15115612|15115921 hsa-miR-6819-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6842-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6851-5p 1 1 0
chr19:15115612|15115921 hsa-miR-7107-5p 1 0 0
chr19:15115612|15115921 hsa-miR-7110-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6722-3p 1 0 0
chr19:15115612|15115921 hsa-miR-6779-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6780a-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6797-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6866-3p 0 1 0
chr19:15115612|15115921 hsa-miR-3620-5p 1 1 0
chr19:15115612|15115921 hsa-miR-5196-5p 1 0 0
chr19:15115612|15115921 hsa-miR-10396b-5p 1 0 0
chr19:15115612|15115921 hsa-miR-1237-5p 1 0 0
chr19:15115612|15115921 hsa-miR-3689a-3p 1 0 0
chr19:15115612|15115921 hsa-miR-4632-5p 1 0 0
chr19:15115612|15115921 hsa-miR-4685-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6846-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6848-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6858-5p 1 0 0
chr19:15115612|15115921 hsa-miR-4758-5p 1 0 0
chr19:15115612|15115921 hsa-miR-3085-5p 1 0 0
chr19:15115612|15115921 hsa-miR-3940-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6855-5p 0 1 0
chr19:15115612|15115921 hsa-miR-4646-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6750-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6791-5p 1 0 0
chr19:15115612|15115921 hsa-miR-550a-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6829-3p 0 1 0
chr19:15115612|15115921 hsa-miR-4723-3p 0 1 0
chr19:15115612|15115921 hsa-miR-10394-5p 1 0 0
chr19:15115612|15115921 hsa-miR-6715b-5p 1 0 0
chr19:15115612|15115921 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:15115612|15115921
ORF Type ORF1
Protein Length 70
Nucleotide Length 213
Protein Sequence LLPRNLCPASIIPYQGHHWDLQEDDEGRPQPSAPWLGQPEDRDRDRASAREEAPSPPQPTPGDISQNPRP
Nucleotide Sequence CTGCTCCCGAGAAATCTGTGTCCAGCCAGCATCATTCCCTACCAAGGCCATCACTGGGATCTACAGGAAGATGATGAAGGCAGGCCGCAGCCTTCAGCCCCATGGCTTGGCCAGCCAGAGGACAGAGACAGGGATAGGGCCTCTGCCAGAGAGGAGGCTCCCTCCCCACCTCAGCCCACCCCTGGTGACATCTCCCAGAACCCCAGGCCCTAA
CircID chr19:15115612|15115921
ORF Type ORF2
Protein Length 80
Nucleotide Length 240
Protein Sequence MMKAGRSLQPHGLASQRTETGIGPLPERRLPPHLSPPLVTSPRTPGPKLPSGQPSHLVSDECIKFDEAVAKSSVPKQAPD
Nucleotide Sequence ATGATGAAGGCAGGCCGCAGCCTTCAGCCCCATGGCTTGGCCAGCCAGAGGACAGAGACAGGGATAGGGCCTCTGCCAGAGAGGAGGCTCCCTCCCCACCTCAGCCCACCCCTGGTGACATCTCCCAGAACCCCAGGCCCTAAGCTTCCCTCAGGCCAGCCCAGTCACCTTGTGTCTGACGAATGTATCAAATTCGATGAGGCTGTAGCCAAAAGCTCCGTCCCCAAACAGGCACCAGAC
CircID chr19:15115612|15115921
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MFGDGAFGYSLIEFDTFVRHKVTGLA
Nucleotide Sequence CTGTTTGGGGACGGAGCTTTTGGCTACAGCCTCATCGAATTTGATACATTCGTCAGACACAAGGTGACTGGGCTGGCCTGA
CircID chr19:15115612|15115921
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MAGQAMGLKAAACLHHLPVDPSDGLGRE
Nucleotide Sequence CTGGCTGGCCAAGCCATGGGGCTGAAGGCTGCGGCCTGCCTTCATCATCTTCCTGTAGATCCCAGTGATGGCCTTGGTAGGGAATGA
CircID chr19:15115612|15115921
ORF Type ORF5
Protein Length 46
Nucleotide Length 141
Protein Sequence MGWPEGSLGPGVLGDVTRGGLRWGGSLLSGRGPIPVSVLWLAKPWG
Nucleotide Sequence CTGGGCTGGCCTGAGGGAAGCTTAGGGCCTGGGGTTCTGGGAGATGTCACCAGGGGTGGGCTGAGGTGGGGAGGGAGCCTCCTCTCTGGCAGAGGCCCTATCCCTGTCTCTGTCCTCTGGCTGGCCAAGCCATGGGGCTGA
CircID chr19:15115612|15115921
ORF Type ORF6
Protein Length 32
Nucleotide Length 99
Protein Sequence MAEALSLSLSSGWPSHGAEGCGLPSSSSCRSQ
Nucleotide Sequence CTGGCAGAGGCCCTATCCCTGTCTCTGTCCTCTGGCTGGCCAAGCCATGGGGCTGAAGGCTGCGGCCTGCCTTCATCATCTTCCTGTAGATCCCAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab