CircNet

General Information

circRNA Basic Information

CircID	chr19:16094837\|16095050
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CCAGAAAGGACACATTCTTCAGACCATATCTTCCAATGTTTTTTTGGGGAAGTGAGGTTCCCATATAAGGGAAAATGCCCCATTCCAAAATACGACCTTTGGACAGGGTGACGTCATTGGAAATCCGAAATAAACTGAGGGGTGGGGACCAGTGGGGGGAAGCTCTGTCACTTCTGGTTACCACTGTTTTGAAGCTTCATTGTGGCTAATCCCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:16094837\|16095050	hsa-miR-10a-5p	0	0	1
chr19:16094837\|16095050	hsa-miR-10a-3p	0	0	1
chr19:16094837\|16095050	hsa-miR-10b-5p	0	0	1
chr19:16094837\|16095050	hsa-miR-10b-3p	0	0	1
chr19:16094837\|16095050	hsa-miR-204-5p	0	0	1
chr19:16094837\|16095050	hsa-miR-204-3p	0	0	1
chr19:16094837\|16095050	hsa-miR-211-5p	0	0	1
chr19:16094837\|16095050	hsa-miR-211-3p	0	0	1
chr19:16094837\|16095050	hsa-miR-206	0	0	1
chr19:16094837\|16095050	hsa-miR-613	0	0	1
chr19:16094837\|16095050	hsa-miR-623	0	0	1
chr19:16094837\|16095050	hsa-miR-1323	0	0	1
chr19:16094837\|16095050	hsa-miR-548o-3p	0	0	1
chr19:16094837\|16095050	hsa-miR-1292-5p	0	0	1
chr19:16094837\|16095050	hsa-miR-1292-3p	0	0	1
chr19:16094837\|16095050	hsa-miR-548o	0	0	1
chr19:16094837\|16095050	hsa-miR-127-5p	0	0	1
chr19:16094837\|16095050	hsa-miR-486-3p	0	0	1
chr19:16094837\|16095050	hsa-miR-339-5p	0	0	1
chr19:16094837\|16095050	hsa-miR-876-5p	0	1	1
chr19:16094837\|16095050	hsa-miR-542-3p	0	0	1
chr19:16094837\|16095050	hsa-miR-7	0	0	1
chr19:16094837\|16095050	hsa-miR-1	0	0	1
chr19:16094837\|16095050	hsa-miR-768-3p	0	0	1
chr19:16094837\|16095050	hsa-miR-1259	0	0	1
chr19:16094837\|16095050	hsa-miR-1270	1	0	0
chr19:16094837\|16095050	hsa-miR-4286	0	1	0
chr19:16094837\|16095050	hsa-miR-27a-5p	1	0	0
chr19:16094837\|16095050	hsa-miR-3679-3p	0	1	0
chr19:16094837\|16095050	hsa-miR-4757-3p	0	1	0
chr19:16094837\|16095050	hsa-miR-3158-3p	0	1	0
chr19:16094837\|16095050	hsa-miR-6857-3p	1	1	0
chr19:16094837\|16095050	hsa-miR-4755-5p	0	1	0
chr19:16094837\|16095050	hsa-miR-4723-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:16094837\|16095050
ORF Type	ORF1
Protein Length	44
Nucleotide Length	135
Protein Sequence	MPHSKIRPLDRVTSLEIRNKLRGGDQWGEALSLLVTTVLKLHCG
Nucleotide Sequence	ATGCCCCATTCCAAAATACGACCTTTGGACAGGGTGACGTCATTGGAAATCCGAAATAAACTGAGGGGTGGGGACCAGTGGGGGGAAGCTCTGTCACTTCTGGTTACCACTGTTTTGAAGCTTCATTGTGGCTAA

CircID	chr19:16094837\|16095050
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MSKGRILEWGIFPYMGTSLPQKNIGRYGLKNVSFL
Nucleotide Sequence	CTGTCCAAAGGTCGTATTTTGGAATGGGGCATTTTCCCTTATATGGGAACCTCACTTCCCCAAAAAAACATTGGAAGATATGGTCTGAAGAATGTGTCCTTTCTG

CircID	chr19:16094837\|16095050
ORF Type	ORF3
Protein Length	32
Nucleotide Length	99
Protein Sequence	MTSPCPKVVFWNGAFSLIWEPHFPKKTLEDMV
Nucleotide Sequence	ATGACGTCACCCTGTCCAAAGGTCGTATTTTGGAATGGGGCATTTTCCCTTATATGGGAACCTCACTTCCCCAAAAAAACATTGGAAGATATGGTCTGA

CircID	chr19:16094837\|16095050
ORF Type	ORF4
Protein Length	27
Nucleotide Length	81
Protein Sequence	MGHFPLYGNLTSPKKHWKIWSEECVLS
Nucleotide Sequence	ATGGGGCATTTTCCCTTATATGGGAACCTCACTTCCCCAAAAAAACATTGGAAGATATGGTCTGAAGAATGTGTCCTTTCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information