CircRNA Information

General Information
circRNA Basic Information
CircID chr19:16646721|16646897
Strand +
CircType exon
Host Gene ENSG00000214046.7;
Algorism CIRI2;
Sequence AGCCGTATTTTTGGACATTCAGTGTTACTTGCTGAGTCTGACAGCCTCTGGGCCCGGCCAGGGGCCCTGTTAACAAACTGCTTTCACATCCCAACAGGGTCTGCTTGGCCACTCAGTGCAGCTGCGATTAACCCTAAAGGCTTTAAGGAACGGGCCACCTGTAACAGAGACACCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:16646721|16646897 hsa-miR-10a-5p 0 0 1
chr19:16646721|16646897 hsa-miR-10a-3p 0 0 1
chr19:16646721|16646897 hsa-miR-10b-5p 0 0 1
chr19:16646721|16646897 hsa-miR-10b-3p 0 0 1
chr19:16646721|16646897 hsa-miR-141-5p 0 0 1
chr19:16646721|16646897 hsa-miR-141-3p 0 0 1
chr19:16646721|16646897 hsa-miR-200a-5p 0 0 1
chr19:16646721|16646897 hsa-miR-200a-3p 0 0 1
chr19:16646721|16646897 hsa-miR-504-5p 0 0 1
chr19:16646721|16646897 hsa-miR-504-3p 0 0 1
chr19:16646721|16646897 hsa-miR-545-5p 0 0 1
chr19:16646721|16646897 hsa-miR-545-3p 0 0 1
chr19:16646721|16646897 hsa-miR-552-5p 0 0 1
chr19:16646721|16646897 hsa-miR-552-3p 0 0 1
chr19:16646721|16646897 hsa-miR-593-5p 0 0 1
chr19:16646721|16646897 hsa-miR-593-3p 0 0 1
chr19:16646721|16646897 hsa-miR-802 0 0 1
chr19:16646721|16646897 hsa-miR-663b 1 0 1
chr19:16646721|16646897 hsa-miR-512-5p 0 0 1
chr19:16646721|16646897 hsa-miR-296-5p 0 0 1
chr19:16646721|16646897 hsa-miR-296-3p 0 0 1
chr19:16646721|16646897 hsa-miR-485-5p 0 0 1
chr19:16646721|16646897 hsa-miR-331-3p 0 1 1
chr19:16646721|16646897 hsa-miR-769-3p 1 0 1
chr19:16646721|16646897 hsa-miR-450b-3p 0 0 1
chr19:16646721|16646897 hsa-miR-1274b 0 0 1
chr19:16646721|16646897 hsa-miR-138 0 0 1
chr19:16646721|16646897 hsa-miR-1291 1 0 0
chr19:16646721|16646897 hsa-miR-1538 1 0 0
chr19:16646721|16646897 hsa-miR-4425 0 1 0
chr19:16646721|16646897 hsa-miR-4651 1 0 0
chr19:16646721|16646897 hsa-miR-4657 1 1 0
chr19:16646721|16646897 hsa-miR-5572 1 0 0
chr19:16646721|16646897 hsa-miR-7974 1 0 0
chr19:16646721|16646897 hsa-miR-8068 0 1 0
chr19:16646721|16646897 hsa-miR-138-5p 0 1 0
chr19:16646721|16646897 hsa-miR-370-3p 1 0 0
chr19:16646721|16646897 hsa-miR-323a-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6747-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6799-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6728-5p 1 1 0
chr19:16646721|16646897 hsa-miR-3677-5p 0 1 0
chr19:16646721|16646897 hsa-miR-1301-3p 1 1 0
chr19:16646721|16646897 hsa-miR-6742-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6796-5p 1 0 0
chr19:16646721|16646897 hsa-miR-2467-3p 0 1 0
chr19:16646721|16646897 hsa-miR-4793-3p 0 1 0
chr19:16646721|16646897 hsa-miR-4764-5p 1 1 0
chr19:16646721|16646897 hsa-miR-1266-3p 1 0 0
chr19:16646721|16646897 hsa-miR-7160-3p 0 1 0
chr19:16646721|16646897 hsa-miR-6801-5p 0 1 0
chr19:16646721|16646897 hsa-miR-4797-3p 0 1 0
chr19:16646721|16646897 hsa-miR-6812-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6737-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6752-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6803-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6819-5p 1 0 0
chr19:16646721|16646897 hsa-miR-7110-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6751-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6763-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6836-5p 0 1 0
chr19:16646721|16646897 hsa-miR-4769-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6855-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6791-5p 1 0 0
chr19:16646721|16646897 hsa-miR-6764-5p 0 1 0
chr19:16646721|16646897 hsa-miR-374c-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:16646721|16646897
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MLTNCFHIPTGSAWPLSAAAINPKGFKERATCNRDTS
Nucleotide Sequence CTGTTAACAAACTGCTTTCACATCCCAACAGGGTCTGCTTGGCCACTCAGTGCAGCTGCGATTAACCCTAAAGGCTTTAAGGAACGGGCCACCTGTAACAGAGACACCAGC
CircID chr19:16646721|16646897
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MLGHSVQLRLTLKALRNGPPVTETP
Nucleotide Sequence CTGCTTGGCCACTCAGTGCAGCTGCGATTAACCCTAAAGGCTTTAAGGAACGGGCCACCTGTAACAGAGACACCA
CircID chr19:16646721|16646897
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MGPARGPVNKLLSHPNRVCLATQCSCD
Nucleotide Sequence CTGGGCCCGGCCAGGGGCCCTGTTAACAAACTGCTTTCACATCCCAACAGGGTCTGCTTGGCCACTCAGTGCAGCTGCGATTAA
CircID chr19:16646721|16646897
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence LVSLLQVARSLKPLGLIAAALSGQADPVGM
Nucleotide Sequence CTGGTGTCTCTGTTACAGGTGGCCCGTTCCTTAAAGCCTTTAGGGTTAATCGCAGCTGCACTGAGTGGCCAAGCAGACCCTGTTGGGATGTGA
CircID chr19:16646721|16646897
ORF Type ORF5
Protein Length 32
Nucleotide Length 96
Protein Sequence MLGCESSLLTGPLAGPRGCQTQQVTLNVQKYG
Nucleotide Sequence CTGTTGGGATGTGAAAGCAGTTTGTTAACAGGGCCCCTGGCCGGGCCCAGAGGCTGTCAGACTCAGCAAGTAACACTGAATGTCCAAAAATACGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab