CircNet

General Information

circRNA Basic Information

CircID	chr19:16945549\|16947131
Strand	-
CircType	exon
Host Gene	ENSG00000160111.12;
Algorism	CIRI2;DCC;
Sequence	GCTGAGCCCATCTGGGTCGTTCTGTCCTTCAGCGACCTGGGACTCAACAACATCACGGCCAAAGCCCTTGCTTACGGAGACACAAATTGCTGCCGGGATGGGAGGTCCAGCAAACACCCTGAGGAGAATCACGCCGACAGGAGGGTCCCCATCGGGGTGGATCACGTCAGGCGCAGTGTGATGGTTGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:16945549\|16947131
ORF Type	ORF1
Protein Length	55
Nucleotide Length	165
Protein Sequence	VIHPDGDPPVGVILLRVFAGPPIPAAICVSVSKGFGRDVVESQVAEGQNDPDGLS
Nucleotide Sequence	GTGATCCACCCCGATGGGGACCCTCCTGTCGGCGTGATTCTCCTCAGGGTGTTTGCTGGACCTCCCATCCCGGCAGCAATTTGTGTCTCCGTAAGCAAGGGCTTTGGCCGTGATGTTGTTGAGTCCCAGGTCGCTGAAGGACAGAACGACCCAGATGGGCTCAGC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr19:16945549\|16947131	FMR1	1	0	0
chr19:16945549\|16947131	ELAVL1	0	1	0
chr19:16945549\|16947131	NCBP3	1	0	0
chr19:16945549\|16947131	SF3B4	0	1	0
chr19:16945549\|16947131	PRPF8	4	5	0
chr19:16945549\|16947131	ZNF622	2	0	0
chr19:16945549\|16947131	TAF15	0	1	0
chr19:16945549\|16947131	CPSF7	1	0	0
chr19:16945549\|16947131	CPSF6	1	1	0
chr19:16945549\|16947131	NUDT21	0	2	0
chr19:16945549\|16947131	GPKOW	0	1	0
chr19:16945549\|16947131	CPSF3	0	1	0
chr19:16945549\|16947131	RBM15B	0	1	0
chr19:16945549\|16947131	CPSF4	0	1	0
chr19:16945549\|16947131	SRSF1	2	1	0
chr19:16945549\|16947131	EIF3B	0	1	0
chr19:16945549\|16947131	DDX54	1	0	1
chr19:16945549\|16947131	EFTUD2	0	1	0
chr19:16945549\|16947131	FIP1L1	0	1	0
chr19:16945549\|16947131	PTBP1	2	1	0
chr19:16945549\|16947131	HNRNPC	7	3	0
chr19:16945549\|16947131	DDX3X	5	1	0
chr19:16945549\|16947131	FXR2	0	1	0
chr19:16945549\|16947131	TARDBP	6	1	1
chr19:16945549\|16947131	BUD13	0	6	0
chr19:16945549\|16947131	RBFOX2	1	0	0
chr19:16945549\|16947131	CSTF2T	1	0	1
chr19:16945549\|16947131	CSTF2	1	0	0
chr19:16945549\|16947131	TIAL1	1	0	0
chr19:16945549\|16947131	ATXN2	1	0	0
chr19:16945549\|16947131	EWSR1	0	1	0
chr19:16945549\|16947131	FBL	1	0	0

CircRNA Information