CircNet

General Information

circRNA Basic Information

CircID	chr19:17167943\|17175741
Strand	+
CircType	exon
Host Gene	ENSG00000099331.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAGGAATATCAGGGCGAGGGGATCACGTGGCACAACATCGGCTACACAGACAATGTCGGCTGCATCCATCTCATCAGCAAGAAACCCACGGGCCTCTTCTACCTGCTGGACGAGGAGAGCAACTTCCCCCACGCCACGAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGACAATAAGTACTTCCTGGGCACCCCGGTCATGGAGCCAGCTTTCATCATCCAGCACTTCGCAGGGAAGGTGAAATATCAGATCAAGGACTTCCGGGAGAAGAACATGGACTACATGCGGCCAGACATCGTGGCCCTGCTGCGGGGCAGTGACAGCTCCTACGTGCGGGAGCTCATCGGCATGGACCCCGTGGCCGTGTTCCGCTGGGCCGTGCTCCGGGCTGCTATCCGGGCCATGGCAGTGCTTCGGGAGGCCGGACGCCTGCGGGCCGAGAGGGCCGAAAAGGCTGCAGGTATGAGCAGCCCTGGTGCCCAAAGTCACCCAGAAGAGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAAAACTTTACCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:17167943\|17175741	hsa-miR-149-5p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:17167943\|17175741
ORF Type	ORF1
Protein Length	166
Nucleotide Length	498
Protein Sequence	VTLGTRAAHTCSLFGPLGPQASGLPKHCHGPDSSPEHGPAEHGHGVHADELPHVGAVTAPQQGHDVWPHVVHVLLPEVLDLIFHLPCEVLDDESWLHDRGAQEVLIVLMLLFELGQQGLARGVGEVALLVQQVEEARGFLADEMDAADIVCVADVVPRDPLALIFL
Nucleotide Sequence	GTGACTTTGGGCACCAGGGCTGCTCATACCTGCAGCCTTTTCGGCCCTCTCGGCCCGCAGGCGTCCGGCCTCCCGAAGCACTGCCATGGCCCGGATAGCAGCCCGGAGCACGGCCCAGCGGAACACGGCCACGGGGTCCATGCCGATGAGCTCCCGCACGTAGGAGCTGTCACTGCCCCGCAGCAGGGCCACGATGTCTGGCCGCATGTAGTCCATGTTCTTCTCCCGGAAGTCCTTGATCTGATATTTCACCTTCCCTGCGAAGTGCTGGATGATGAAAGCTGGCTCCATGACCGGGGTGCCCAGGAAGTACTTATTGTCCTCATGTTGCTGTTTGAACTTGGCCAGCAGGGTCTGGCTCGTGGCGTGGGGGAAGTTGCTCTCCTCGTCCAGCAGGTAGAAGAGGCCCGTGGGTTTCTTGCTGATGAGATGGATGCAGCCGACATTGTCTGTGTAGCCGATGTTGTGCCACGTGATCCCCTCGCCCTGATATTCCTC

CircID	chr19:17167943\|17175741
ORF Type	ORF2
Protein Length	113
Nucleotide Length	339
Protein Sequence	MEPAFIIQHFAGKVKYQIKDFREKNMDYMRPDIVALLRGSDSSYVRELIGMDPVAVFRWAVLRAAIRAMAVLREAGRLRAERAEKAAGMSSPGAQSHPEELPRGASTPSEKLY
Nucleotide Sequence	ATGGAGCCAGCTTTCATCATCCAGCACTTCGCAGGGAAGGTGAAATATCAGATCAAGGACTTCCGGGAGAAGAACATGGACTACATGCGGCCAGACATCGTGGCCCTGCTGCGGGGCAGTGACAGCTCCTACGTGCGGGAGCTCATCGGCATGGACCCCGTGGCCGTGTTCCGCTGGGCCGTGCTCCGGGCTGCTATCCGGGCCATGGCAGTGCTTCGGGAGGCCGGACGCCTGCGGGCCGAGAGGGCCGAAAAGGCTGCAGGTATGAGCAGCCCTGGTGCCCAAAGTCACCCAGAAGAGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAAAACTTTAC

CircID	chr19:17167943\|17175741
ORF Type	ORF3
Protein Length	66
Nucleotide Length	198
Protein Sequence	MSAASISSARNPRASSTCWTRRATSPTPRARPCWPSSNSNMRTISTSWAPRSWSQLSSSSTSQGR*
Nucleotide Sequence	ATGTCGGCTGCATCCATCTCATCAGCAAGAAACCCACGGGCCTCTTCTACCTGCTGGACGAGGAGAGCAACTTCCCCCACGCCACGAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGACAATAAGTACTTCCTGGGCACCCCGGTCATGGAGCCAGCTTTCATCATCCAGCACTTCGCAGGGAAGGTGA

CircID	chr19:17167943\|17175741
ORF Type	ORF4
Protein Length	43
Nucleotide Length	129
Protein Sequence	MMKAGSMTGVPRKYLLSSCCCLNLASRVWLVAWGKLLSSSSR*
Nucleotide Sequence	ATGATGAAAGCTGGCTCCATGACCGGGGTGCCCAGGAAGTACTTATTGTCCTCATGTTGCTGTTTGAACTTGGCCAGCAGGGTCTGGCTCGTGGCGTGGGGGAAGTTGCTCTCCTCGTCCAGCAGGTAG

CircID	chr19:17167943\|17175741
ORF Type	ORF5
Protein Length	73
Nucleotide Length	219
Protein Sequence	QLLRAGAHRHGPRGRVPLGRAPGCYPGHGSASGGRTPAGREGRKGCRYEQPWCPKSPRRAAKRSQHPFGKTLP
Nucleotide Sequence	CAGCTCCTACGTGCGGGAGCTCATCGGCATGGACCCCGTGGCCGTGTTCCGCTGGGCCGTGCTCCGGGCTGCTATCCGGGCCATGGCAGTGCTTCGGGAGGCCGGACGCCTGCGGGCCGAGAGGGCCGAAAAGGCTGCAGGTATGAGCAGCCCTGGTGCCCAAAGTCACCCAGAAGAGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAAAACTTTACCG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr19:17167943\|17175741	NOP56	0	1	0
chr19:17167943\|17175741	MOV10	0	0	2
chr19:17167943\|17175741	ELAVL1	0	5	0
chr19:17167943\|17175741	DHX9	0	1	0
chr19:17167943\|17175741	SF3B1	0	0	1
chr19:17167943\|17175741	PRPF8	0	4	2
chr19:17167943\|17175741	UPF1	0	1	0
chr19:17167943\|17175741	FMR1	0	0	4
chr19:17167943\|17175741	CSTF2	2	2	0
chr19:17167943\|17175741	FUS	0	1	0
chr19:17167943\|17175741	DGCR8	0	2	0
chr19:17167943\|17175741	SRSF7	0	0	2
chr19:17167943\|17175741	SRSF1	1	0	4
chr19:17167943\|17175741	NOP58	0	0	4
chr19:17167943\|17175741	U2AF1	0	0	1
chr19:17167943\|17175741	ADAR	0	1	0
chr19:17167943\|17175741	U2AF2	11	5	0
chr19:17167943\|17175741	SRSF9	0	0	1
chr19:17167943\|17175741	DDX54	2	1	7
chr19:17167943\|17175741	LSM11	1	0	2
chr19:17167943\|17175741	DKC1	0	2	0
chr19:17167943\|17175741	FIP1L1	3	0	1
chr19:17167943\|17175741	PTBP1	6	0	1
chr19:17167943\|17175741	HNRNPC	23	5	0
chr19:17167943\|17175741	TRA2A	0	0	3
chr19:17167943\|17175741	ZNF184	1	0	0
chr19:17167943\|17175741	HNRNPA1	0	1	0
chr19:17167943\|17175741	AGO2	0	1	0
chr19:17167943\|17175741	SBDS	0	0	1
chr19:17167943\|17175741	MSI2	1	0	2
chr19:17167943\|17175741	ACIN1	0	0	1
chr19:17167943\|17175741	LIN28B	0	1	7
chr19:17167943\|17175741	LIN28A	0	1	0
chr19:17167943\|17175741	FXR1	1	0	1
chr19:17167943\|17175741	FXR2	0	0	1
chr19:17167943\|17175741	SND1	1	0	0
chr19:17167943\|17175741	IGF2BP1	1	1	8
chr19:17167943\|17175741	IGF2BP3	1	0	1
chr19:17167943\|17175741	IGF2BP2	1	3	14
chr19:17167943\|17175741	TARDBP	11	11	0
chr19:17167943\|17175741	STAU1	1	0	0
chr19:17167943\|17175741	BUD13	0	0	2
chr19:17167943\|17175741	RBFOX2	1	0	1
chr19:17167943\|17175741	CNBP	0	1	0
chr19:17167943\|17175741	EIF4G2	0	7	0
chr19:17167943\|17175741	AARS	0	1	0
chr19:17167943\|17175741	CSTF2T	1	1	1
chr19:17167943\|17175741	BCCIP	2	0	0
chr19:17167943\|17175741	VIM	0	0	1
chr19:17167943\|17175741	TIA1	0	1	0
chr19:17167943\|17175741	PPIG	0	0	1
chr19:17167943\|17175741	YWHAG	0	0	1
chr19:17167943\|17175741	AIFM1	0	1	0
chr19:17167943\|17175741	ATXN2	0	2	0
chr19:17167943\|17175741	EIF4A3	1	2	8
chr19:17167943\|17175741	FBL	0	0	3

CircRNA Information